Wall clock time and date at job start Tue Mar 9 2021 12:56:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42901 * 114.00380 * 2 1 4 4 H 1.09005 * 112.90471 * 18.74814 * 3 2 1 5 5 C 1.53783 * 113.61512 * 150.00139 * 3 2 1 6 6 C 1.53780 * 87.08064 * 139.98334 * 5 3 2 7 7 C 1.52997 * 113.61173 * 89.11547 * 6 5 3 8 8 O 1.42900 * 109.46786 * 175.17530 * 7 6 5 9 9 N 1.46492 * 113.61198 * 220.01562 * 6 5 3 10 10 C 1.34776 * 120.00699 * 304.17214 * 9 6 5 11 11 O 1.21701 * 119.99545 * 4.81088 * 10 9 6 12 12 C 1.46669 * 120.00576 * 184.80854 * 10 9 6 13 13 C 1.37886 * 126.22382 * 354.54834 * 12 10 9 14 14 C 1.39880 * 107.09187 * 180.02562 * 13 12 10 15 15 Br 1.89097 * 126.07099 * 180.02562 * 14 13 12 16 16 C 1.35503 * 107.85405 * 0.02562 * 14 13 12 17 17 C 1.50700 * 125.57215 * 180.02562 * 16 14 13 18 18 O 1.42907 * 109.46999 * 149.97376 * 17 16 14 19 19 Si 1.86296 * 109.46948 * 29.97372 * 17 16 14 20 20 N 1.35600 * 108.85656 * 359.73227 * 16 14 13 21 21 C 1.46499 * 125.67933 * 180.29417 * 20 16 14 22 22 C 1.53777 * 113.61572 * 247.49945 * 3 2 1 23 23 H 1.08997 * 109.47659 * 179.97438 * 1 2 3 24 24 H 1.09004 * 109.47029 * 299.99882 * 1 2 3 25 25 H 1.09002 * 109.46805 * 59.99611 * 1 2 3 26 26 H 1.09001 * 113.61001 * 254.53206 * 5 3 2 27 27 H 1.08995 * 113.61271 * 25.43213 * 5 3 2 28 28 H 1.09001 * 109.47729 * 295.17475 * 7 6 5 29 29 H 1.09002 * 109.47380 * 55.18315 * 7 6 5 30 30 H 0.96701 * 114.00022 * 180.02562 * 8 7 6 31 31 H 0.97005 * 119.99975 * 124.17719 * 9 6 5 32 32 H 1.08002 * 126.45273 * 0.02562 * 13 12 10 33 33 H 1.08996 * 109.47206 * 269.97057 * 17 16 14 34 34 H 0.96698 * 113.99645 * 299.99831 * 18 17 16 35 35 H 1.48504 * 110.00038 * 58.68215 * 19 17 16 36 36 H 1.48499 * 109.99855 * 179.97438 * 19 17 16 37 37 H 1.09007 * 109.47042 * 276.20391 * 21 20 16 38 38 H 1.08999 * 109.47216 * 36.20046 * 21 20 16 39 39 H 1.08998 * 109.47271 * 156.20879 * 21 20 16 40 40 H 1.08995 * 113.61854 * 334.56581 * 22 3 2 41 41 H 1.08997 * 113.61482 * 105.47021 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 1 1.3143 2.0798 0.3227 5 6 3.3756 1.3718 0.7045 6 6 3.8228 2.3181 -0.4222 7 6 3.5414 3.7935 -0.1311 8 8 4.0896 4.5982 -1.1770 9 7 5.1935 2.0785 -0.8803 10 6 6.2133 2.1078 0.0004 11 8 5.9875 2.2460 1.1883 12 6 7.5950 1.9731 -0.4726 13 6 7.9911 1.7069 -1.7663 14 6 9.3892 1.6638 -1.7675 15 35 10.4917 1.3359 -3.2685 16 6 9.8133 1.8989 -0.5022 17 6 11.2513 1.9434 -0.0535 18 8 11.3784 2.8429 1.0496 19 14 12.3227 2.5301 -1.4601 20 7 8.7324 2.0939 0.2931 21 6 8.7690 2.3825 1.7289 22 6 2.7535 1.6488 -1.3017 23 1 -0.3634 -1.0276 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3633 0.5139 -0.8900 26 1 3.3384 1.8470 1.6848 27 1 3.9088 0.4212 0.7137 28 1 2.4647 3.9541 -0.0756 29 1 3.9996 4.0704 0.8184 30 1 3.9488 5.5475 -1.0579 31 1 5.3672 1.8988 -1.8176 32 1 7.3438 1.5593 -2.6181 33 1 11.5674 0.9462 0.2526 34 1 11.1139 3.7511 0.8490 35 1 11.8814 3.8756 -1.9076 36 1 13.7433 2.5790 -1.0302 37 1 8.8570 1.4490 2.2850 38 1 9.6257 3.0191 1.9499 39 1 7.8516 2.8937 2.0203 40 1 3.1166 0.7741 -1.8410 41 1 2.2141 2.3477 -1.9411 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341582_5000100.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:18 Heat of formation + Delta-G solvation = -75.442553 kcal Electronic energy + Delta-G solvation = -27122.604045 eV Core-core repulsion = 23052.758023 eV Total energy + Delta-G solvation = -4069.846023 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.056 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.94224 -41.62965 -39.62212 -38.10757 -37.93419 -36.67790 -34.91635 -34.26085 -32.28074 -31.17527 -28.78798 -27.43374 -27.28377 -27.02027 -26.84610 -24.28962 -22.99606 -21.58941 -20.72530 -20.06526 -19.03704 -18.61247 -18.40003 -17.85988 -17.21783 -16.89928 -16.72644 -16.23886 -16.14286 -15.99055 -15.68757 -15.63292 -15.35850 -15.05776 -14.81392 -14.57745 -14.56023 -14.08755 -13.73696 -13.65338 -13.49830 -13.22146 -13.05018 -12.82600 -12.71165 -12.47488 -12.45549 -12.06415 -11.90150 -11.78476 -11.66035 -11.23700 -10.93278 -10.77988 -10.51140 -10.24719 -9.89192 -9.35234 -4.69735 0.15000 0.33382 0.88537 1.20157 1.42779 1.55376 1.90925 2.14310 2.21973 2.85833 2.99754 3.01924 3.21934 3.26932 3.54182 3.56459 3.67193 3.74912 3.96309 4.10381 4.15691 4.25561 4.32865 4.37442 4.40479 4.46529 4.54145 4.56135 4.59326 4.64544 4.67581 4.68447 4.85991 4.91707 4.91839 5.01710 5.21176 5.41699 5.56288 5.77081 6.19268 6.24373 6.39964 6.76855 7.05538 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.398 6.398 3 C 0.063 3.937 4 H 0.112 0.888 5 C -0.123 4.123 6 C 0.154 3.846 7 C 0.087 3.913 8 O -0.579 6.579 9 N -0.682 5.682 10 C 0.593 3.407 11 O -0.569 6.569 12 C -0.056 4.056 13 C -0.095 4.095 14 C -0.190 4.190 15 Br 0.090 6.910 16 C 0.056 3.944 17 C -0.040 4.040 18 O -0.540 6.540 19 Si 0.629 3.371 20 N -0.389 5.389 21 C 0.057 3.943 22 C -0.140 4.140 23 H 0.090 0.910 24 H 0.051 0.949 25 H 0.055 0.945 26 H 0.076 0.924 27 H 0.079 0.921 28 H 0.081 0.919 29 H 0.042 0.958 30 H 0.397 0.603 31 H 0.415 0.585 32 H 0.182 0.818 33 H 0.140 0.860 34 H 0.387 0.613 35 H -0.279 1.279 36 H -0.267 1.267 37 H 0.079 0.921 38 H 0.115 0.885 39 H 0.094 0.906 40 H 0.099 0.901 41 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.929 0.944 -3.275 5.993 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.317 6.317 3 C 0.005 3.995 4 H 0.130 0.870 5 C -0.161 4.161 6 C 0.068 3.932 7 C 0.008 3.992 8 O -0.386 6.386 9 N -0.333 5.333 10 C 0.382 3.618 11 O -0.450 6.450 12 C -0.169 4.169 13 C -0.121 4.121 14 C -0.275 4.275 15 Br 0.174 6.826 16 C -0.067 4.067 17 C -0.150 4.150 18 O -0.348 6.348 19 Si 0.531 3.469 20 N -0.061 5.061 21 C -0.083 4.083 22 C -0.178 4.178 23 H 0.109 0.891 24 H 0.070 0.930 25 H 0.073 0.927 26 H 0.094 0.906 27 H 0.098 0.902 28 H 0.099 0.901 29 H 0.061 0.939 30 H 0.247 0.753 31 H 0.253 0.747 32 H 0.199 0.801 33 H 0.157 0.843 34 H 0.237 0.763 35 H -0.204 1.204 36 H -0.193 1.193 37 H 0.097 0.903 38 H 0.133 0.867 39 H 0.113 0.887 40 H 0.118 0.882 41 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -3.707 0.360 -2.798 4.658 hybrid contribution -0.716 1.592 1.184 2.109 sum -4.423 1.952 -1.614 5.097 Atomic orbital electron populations 1.22987 0.79554 1.03761 1.01055 1.87933 1.21442 1.27695 1.94636 1.23716 0.93732 0.85908 0.96174 0.87048 1.23412 0.95421 0.99128 0.98182 1.21511 0.80854 0.93490 0.97395 1.22241 0.98460 0.88521 0.89980 1.86406 1.81733 1.22955 1.47554 1.45255 1.05105 1.71081 1.11812 1.16928 0.83466 0.75947 0.85508 1.90778 1.85393 1.51985 1.16854 1.20203 0.87625 1.17462 0.91651 1.21475 0.92975 1.02074 0.95605 1.20670 0.94978 1.20142 0.91727 1.96304 1.58167 1.93883 1.34246 1.20996 0.90637 1.05202 0.89867 1.24725 0.92138 0.99170 0.98960 1.86546 1.88896 1.23403 1.35907 0.92670 0.78017 0.89076 0.87151 1.43913 1.03795 1.49058 1.09311 1.22664 1.06285 1.03947 0.75378 1.23768 0.95416 1.01186 0.97386 0.89105 0.93011 0.92676 0.90556 0.90211 0.90072 0.93928 0.75277 0.74746 0.80050 0.84264 0.76350 1.20412 1.19307 0.90253 0.86728 0.88736 0.88219 0.88445 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 10.85 113.37 1.23 1.16 16 2 O -0.40 -1.10 10.71 -148.98 -1.60 -2.70 16 3 C 0.06 -0.08 3.96 31.12 0.12 0.04 16 4 H 0.11 -0.62 7.44 -2.38 -0.02 -0.64 16 5 C -0.12 -0.28 5.81 31.12 0.18 -0.10 16 6 C 0.15 -0.05 0.97 4.13 0.00 -0.05 16 7 C 0.09 -0.15 6.45 71.98 0.46 0.31 16 8 O -0.58 0.80 13.32 -148.98 -1.98 -1.19 16 9 N -0.68 -0.49 4.86 -424.47 -2.06 -2.55 16 10 C 0.59 3.38 7.51 86.44 0.65 4.03 16 11 O -0.57 -6.16 13.54 -4.35 -0.06 -6.21 16 12 C -0.06 -0.24 6.88 40.35 0.28 0.03 16 13 C -0.09 -0.06 10.34 22.58 0.23 0.17 16 14 C -0.19 -0.31 6.15 22.03 0.14 -0.18 16 15 Br 0.09 -0.12 28.24 -20.37 -0.58 -0.70 16 16 C 0.06 0.16 6.15 41.34 0.25 0.42 16 17 C -0.04 -0.06 2.99 71.24 0.21 0.15 16 18 O -0.54 -1.03 10.12 -148.98 -1.51 -2.54 16 19 Si 0.63 1.98 27.10 68.60 1.86 3.84 16 20 N -0.39 -1.70 3.16 -519.61 -1.64 -3.34 16 21 C 0.06 0.15 10.20 127.77 1.30 1.46 16 22 C -0.14 0.43 7.20 31.12 0.22 0.65 16 23 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 24 H 0.05 -0.24 8.14 -2.39 -0.02 -0.26 16 25 H 0.05 -0.29 8.14 -2.39 -0.02 -0.31 16 26 H 0.08 0.27 8.10 -2.39 -0.02 0.25 16 27 H 0.08 0.52 8.14 -2.39 -0.02 0.50 16 28 H 0.08 -0.53 7.39 -2.39 -0.02 -0.55 16 29 H 0.04 0.07 8.14 -2.39 -0.02 0.05 16 30 H 0.40 -3.46 9.12 -74.06 -0.68 -4.13 16 31 H 0.42 -1.42 7.66 -92.70 -0.71 -2.13 16 32 H 0.18 -0.97 7.45 -2.91 -0.02 -0.99 16 33 H 0.14 -0.07 7.96 -2.39 -0.02 -0.09 16 34 H 0.39 -1.01 8.29 -74.06 -0.61 -1.62 16 35 H -0.28 -2.26 7.11 99.48 0.71 -1.55 16 36 H -0.27 -2.40 7.11 99.48 0.71 -1.69 16 37 H 0.08 0.22 8.14 -2.38 -0.02 0.20 16 38 H 0.11 -0.03 5.25 -2.39 -0.01 -0.05 16 39 H 0.09 0.49 6.11 -2.39 -0.01 0.48 16 40 H 0.10 -0.24 8.14 -2.39 -0.02 -0.26 16 41 H 0.10 -0.53 8.10 -2.39 -0.02 -0.55 16 Total: 0.00 -17.87 350.62 -3.14 -21.01 By element: Atomic # 1 Polarization: -12.86 SS G_CDS: -0.86 Total: -13.72 kcal Atomic # 6 Polarization: 2.82 SS G_CDS: 5.29 Total: 8.11 kcal Atomic # 7 Polarization: -2.19 SS G_CDS: -3.71 Total: -5.89 kcal Atomic # 8 Polarization: -7.49 SS G_CDS: -5.15 Total: -12.64 kcal Atomic # 14 Polarization: 1.98 SS G_CDS: 1.86 Total: 3.84 kcal Atomic # 35 Polarization: -0.12 SS G_CDS: -0.58 Total: -0.70 kcal Total: -17.87 -3.14 -21.01 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_5000100.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.432 kcal (2) G-P(sol) polarization free energy of solvation -17.869 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.301 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.142 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.011 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.443 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds