Wall clock time and date at job start Tue Mar 9 2021 12:56:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.42909 * 114.00199 * 2 1 4 4 H 1.08990 * 112.90467 * 18.74947 * 3 2 1 5 5 C 1.53785 * 113.61198 * 150.00009 * 3 2 1 6 6 C 1.53780 * 87.08063 * 139.98226 * 5 3 2 7 7 C 1.53004 * 113.61605 * 89.11050 * 6 5 3 8 8 O 1.42898 * 109.46761 * 178.44862 * 7 6 5 9 9 N 1.46502 * 113.61350 * 220.01857 * 6 5 3 10 10 C 1.34779 * 119.99604 * 295.13776 * 9 6 5 11 11 O 1.21632 * 119.99889 * 5.03200 * 10 9 6 12 12 C 1.47184 * 119.99627 * 185.03401 * 10 9 6 13 13 C 1.36013 * 123.46457 * 0.02595 * 12 10 9 14 14 S 1.70448 * 110.81914 * 179.97438 * 13 12 10 15 15 C 1.75499 * 92.44424 * 359.97438 * 14 13 12 16 16 C 1.50701 * 124.71047 * 180.02562 * 15 14 13 17 17 O 1.42898 * 109.47076 * 119.97826 * 16 15 14 18 18 Si 1.86301 * 109.47179 * 359.97438 * 16 15 14 19 19 C 1.32778 * 110.57781 * 359.74094 * 15 14 13 20 20 C 1.53781 * 113.61319 * 247.49389 * 3 2 1 21 21 H 1.09001 * 109.47137 * 300.00515 * 1 2 3 22 22 H 1.09004 * 109.46896 * 60.00152 * 1 2 3 23 23 H 1.09001 * 109.47629 * 179.97438 * 1 2 3 24 24 H 1.09001 * 113.61008 * 254.53071 * 5 3 2 25 25 H 1.09003 * 113.61709 * 25.42929 * 5 3 2 26 26 H 1.08997 * 109.47078 * 298.44936 * 7 6 5 27 27 H 1.09003 * 109.46877 * 58.45121 * 7 6 5 28 28 H 0.96704 * 113.99719 * 180.02562 * 8 7 6 29 29 H 0.97000 * 120.00245 * 115.14054 * 9 6 5 30 30 H 1.07997 * 124.58732 * 359.97438 * 13 12 10 31 31 H 1.09003 * 109.46987 * 239.97573 * 16 15 14 32 32 H 0.96705 * 113.99976 * 179.97438 * 17 16 15 33 33 H 1.48500 * 109.99952 * 298.68137 * 18 16 15 34 34 H 1.48499 * 109.99733 * 59.99916 * 18 16 15 35 35 H 1.07996 * 123.45707 * 180.23327 * 19 15 14 36 36 H 1.08995 * 113.61241 * 334.56774 * 20 3 2 37 37 H 1.09005 * 113.60958 * 105.38522 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3143 2.0797 0.3227 5 6 3.3756 1.3718 0.7045 6 6 3.8228 2.3181 -0.4221 7 6 3.5414 3.7936 -0.1312 8 8 4.0223 4.5927 -1.2139 9 7 5.1936 2.0785 -0.8803 10 6 6.2296 2.2855 -0.0434 11 8 6.0233 2.5826 1.1179 12 6 7.6105 2.1523 -0.5349 13 6 7.9217 1.8242 -1.8177 14 16 9.6112 1.7598 -2.0338 15 6 9.9171 2.1850 -0.3588 16 6 11.2865 2.3338 0.2525 17 8 11.4441 3.6640 0.7500 18 14 12.5840 1.9968 -1.0413 19 6 8.7745 2.3634 0.2936 20 6 2.7535 1.6488 -1.3017 21 1 -0.3633 0.5139 0.8899 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3634 -1.0276 -0.0005 24 1 3.3384 1.8470 1.6848 25 1 3.9088 0.4212 0.7139 26 1 2.4676 3.9433 -0.0182 27 1 4.0478 4.0855 0.7888 28 1 3.8776 5.5416 -1.0969 29 1 5.3555 1.7709 -1.7858 30 1 7.1964 1.6308 -2.5942 31 1 11.3977 1.6238 1.0720 32 1 12.3044 3.8318 1.1586 33 1 12.4509 0.6058 -1.5439 34 1 12.4431 2.9582 -2.1643 35 1 8.7210 2.6346 1.3376 36 1 3.1167 0.7740 -1.8409 37 1 2.2134 2.3465 -1.9418 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18341582_6894386.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:36 Heat of formation + Delta-G solvation = -88.375509 kcal Electronic energy + Delta-G solvation = -22389.756075 eV Core-core repulsion = 18841.056876 eV Total energy + Delta-G solvation = -3548.699199 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 300.091 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -41.74416 -40.04188 -38.61123 -37.93744 -37.05079 -36.63156 -34.23818 -31.74856 -28.72315 -27.32714 -26.92682 -26.85548 -25.86996 -23.66076 -21.74068 -20.35405 -20.14937 -18.78952 -18.54703 -18.39026 -17.94101 -17.83363 -16.84700 -16.32084 -16.22912 -16.00593 -15.82672 -15.61636 -15.27245 -15.10160 -14.57063 -14.28770 -13.86634 -13.77484 -13.68117 -13.61235 -13.44449 -13.03912 -12.70615 -12.65626 -12.46754 -12.22435 -12.06265 -11.90290 -11.75090 -11.13013 -10.62298 -10.52613 -10.49328 -10.05761 -9.89087 -9.45293 -5.29132 -0.30503 0.40610 0.76152 0.96913 1.16873 1.53519 1.85285 2.07045 2.45994 2.83945 2.97449 3.23210 3.31131 3.52139 3.66465 3.68343 3.87317 3.91566 4.01847 4.21562 4.30182 4.31852 4.37930 4.39160 4.41320 4.58913 4.61619 4.71869 4.73736 4.77626 4.88700 5.00063 5.01863 5.08818 5.27472 5.53765 6.18479 6.53571 6.55636 6.60523 7.31445 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.373 6.373 3 C 0.062 3.938 4 H 0.093 0.907 5 C -0.125 4.125 6 C 0.159 3.841 7 C 0.084 3.916 8 O -0.566 6.566 9 N -0.701 5.701 10 C 0.585 3.415 11 O -0.531 6.531 12 C -0.153 4.153 13 C -0.201 4.201 14 S 0.172 5.828 15 C -0.199 4.199 16 C -0.034 4.034 17 O -0.542 6.542 18 Si 0.670 3.330 19 C -0.048 4.048 20 C -0.151 4.151 21 H 0.044 0.956 22 H 0.043 0.957 23 H 0.088 0.912 24 H 0.085 0.915 25 H 0.100 0.900 26 H 0.057 0.943 27 H 0.064 0.936 28 H 0.382 0.618 29 H 0.401 0.599 30 H 0.172 0.828 31 H 0.085 0.915 32 H 0.385 0.615 33 H -0.238 1.238 34 H -0.234 1.234 35 H 0.158 0.842 36 H 0.099 0.901 37 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.068 -0.057 -1.202 1.609 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.291 6.291 3 C 0.004 3.996 4 H 0.111 0.889 5 C -0.164 4.164 6 C 0.072 3.928 7 C 0.005 3.995 8 O -0.371 6.371 9 N -0.353 5.353 10 C 0.371 3.629 11 O -0.408 6.408 12 C -0.171 4.171 13 C -0.338 4.338 14 S 0.438 5.562 15 C -0.316 4.316 16 C -0.147 4.147 17 O -0.349 6.349 18 Si 0.569 3.431 19 C -0.077 4.077 20 C -0.189 4.189 21 H 0.062 0.938 22 H 0.061 0.939 23 H 0.106 0.894 24 H 0.103 0.897 25 H 0.119 0.881 26 H 0.075 0.925 27 H 0.082 0.918 28 H 0.229 0.771 29 H 0.236 0.764 30 H 0.189 0.811 31 H 0.102 0.898 32 H 0.233 0.767 33 H -0.162 1.162 34 H -0.158 1.158 35 H 0.175 0.825 36 H 0.118 0.882 37 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 1.667 -1.072 -2.927 3.535 hybrid contribution -1.829 0.913 1.101 2.321 sum -0.162 -0.159 -1.826 1.840 Atomic orbital electron populations 1.22844 0.80751 1.03145 1.00123 1.87964 1.19996 1.26666 1.94501 1.23599 0.94024 0.85885 0.96133 0.88945 1.23541 0.94480 1.00020 0.98333 1.21338 0.81275 0.93116 0.97061 1.22256 0.97827 0.89095 0.90370 1.86442 1.84511 1.21806 1.44358 1.45526 1.04829 1.68809 1.16101 1.17508 0.83646 0.76397 0.85326 1.90783 1.85527 1.47525 1.16972 1.20252 0.94457 1.09094 0.93299 1.25795 1.02089 1.05570 1.00388 1.83139 0.98721 1.66024 1.08343 1.23420 0.97994 1.12915 0.97223 1.23990 0.97515 0.88218 1.04956 1.86523 1.40575 1.27523 1.80293 0.94769 0.86780 0.81978 0.79569 1.21017 0.88471 0.96999 1.01210 1.23827 0.96299 1.01089 0.97690 0.93762 0.93860 0.89393 0.89666 0.88135 0.92519 0.91763 0.77051 0.76410 0.81085 0.89776 0.76717 1.16157 1.15781 0.82461 0.88225 0.89872 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.85 101.05 1.10 1.08 16 2 O -0.37 -0.76 10.71 -35.23 -0.38 -1.14 16 3 C 0.06 0.03 3.96 -25.92 -0.10 -0.08 16 4 H 0.09 -0.11 7.40 -51.93 -0.38 -0.50 16 5 C -0.13 -0.21 6.40 -25.92 -0.17 -0.38 16 6 C 0.16 0.20 0.91 -131.00 -0.12 0.08 16 7 C 0.08 0.08 6.17 37.16 0.23 0.31 16 8 O -0.57 -0.77 13.39 -35.23 -0.47 -1.24 16 9 N -0.70 -1.26 4.94 -47.98 -0.24 -1.50 16 10 C 0.59 2.54 7.45 -12.63 -0.09 2.45 16 11 O -0.53 -3.82 15.33 5.25 0.08 -3.73 16 12 C -0.15 -0.53 5.98 -104.63 -0.63 -1.15 16 13 C -0.20 -0.26 10.38 29.93 0.31 0.05 16 14 S 0.17 0.29 20.18 -107.50 -2.17 -1.88 16 15 C -0.20 -0.53 5.72 -36.18 -0.21 -0.73 16 16 C -0.03 0.00 2.94 36.01 0.11 0.10 16 17 O -0.54 -0.24 12.82 -35.23 -0.45 -0.69 16 18 Si 0.67 -0.86 30.91 -169.99 -5.25 -6.12 16 19 C -0.05 -0.18 9.91 -39.02 -0.39 -0.57 16 20 C -0.15 0.01 7.18 -25.92 -0.19 -0.18 16 21 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 22 H 0.04 -0.06 8.14 -51.93 -0.42 -0.49 16 23 H 0.09 -0.12 8.14 -51.93 -0.42 -0.54 16 24 H 0.08 0.17 8.10 -51.93 -0.42 -0.25 16 25 H 0.10 0.29 8.14 -51.93 -0.42 -0.13 16 26 H 0.06 -0.06 7.35 -51.93 -0.38 -0.45 16 27 H 0.06 0.16 7.42 -51.93 -0.39 -0.22 16 28 H 0.38 -0.93 9.12 45.56 0.42 -0.51 16 29 H 0.40 -0.11 7.22 -40.82 -0.29 -0.41 16 30 H 0.17 -0.28 7.02 -52.49 -0.37 -0.65 16 31 H 0.08 -0.14 7.96 -51.93 -0.41 -0.55 16 32 H 0.38 -1.87 8.74 45.56 0.40 -1.47 16 33 H -0.24 -0.16 7.11 56.52 0.40 0.24 16 34 H -0.23 -0.38 7.11 56.52 0.40 0.02 16 35 H 0.16 0.65 8.06 -52.49 -0.42 0.23 16 36 H 0.10 0.00 8.14 -51.93 -0.42 -0.43 16 37 H 0.08 -0.05 8.10 -51.93 -0.42 -0.47 16 LS Contribution 327.54 15.07 4.94 4.94 Total: 0.00 -9.35 327.54 -8.08 -17.42 By element: Atomic # 1 Polarization: -3.06 SS G_CDS: -3.99 Total: -7.04 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: -0.14 Total: 0.98 kcal Atomic # 7 Polarization: -1.26 SS G_CDS: -0.24 Total: -1.50 kcal Atomic # 8 Polarization: -5.58 SS G_CDS: -1.22 Total: -6.80 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.25 Total: -6.12 kcal Atomic # 16 Polarization: 0.29 SS G_CDS: -2.17 Total: -1.88 kcal Total LS contribution 4.94 Total: 4.94 kcal Total: -9.35 -8.08 -17.42 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_6894386.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.951 kcal (2) G-P(sol) polarization free energy of solvation -9.345 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.296 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.079 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.425 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.376 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds