Wall clock time and date at job start Tue Mar 9 2021 12:56:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.42909 * 114.00199 * 2 1 4 4 H 1.08990 * 112.90467 * 18.74947 * 3 2 1 5 5 C 1.53785 * 113.61198 * 150.00009 * 3 2 1 6 6 C 1.53780 * 87.08063 * 139.98226 * 5 3 2 7 7 C 1.53004 * 113.61605 * 89.11050 * 6 5 3 8 8 O 1.42898 * 109.46761 * 178.44862 * 7 6 5 9 9 N 1.46502 * 113.61350 * 220.01857 * 6 5 3 10 10 C 1.34779 * 119.99604 * 295.13776 * 9 6 5 11 11 O 1.21632 * 119.99889 * 5.03200 * 10 9 6 12 12 C 1.47184 * 119.99627 * 185.03401 * 10 9 6 13 13 C 1.36013 * 123.46457 * 0.02595 * 12 10 9 14 14 S 1.70448 * 110.81914 * 179.97438 * 13 12 10 15 15 C 1.75499 * 92.44424 * 359.97438 * 14 13 12 16 16 C 1.50701 * 124.71047 * 180.02562 * 15 14 13 17 17 O 1.42898 * 109.47076 * 119.97826 * 16 15 14 18 18 Si 1.86301 * 109.47179 * 359.97438 * 16 15 14 19 19 C 1.32778 * 110.57781 * 359.74094 * 15 14 13 20 20 C 1.53781 * 113.61319 * 247.49389 * 3 2 1 21 21 H 1.09001 * 109.47137 * 300.00515 * 1 2 3 22 22 H 1.09004 * 109.46896 * 60.00152 * 1 2 3 23 23 H 1.09001 * 109.47629 * 179.97438 * 1 2 3 24 24 H 1.09001 * 113.61008 * 254.53071 * 5 3 2 25 25 H 1.09003 * 113.61709 * 25.42929 * 5 3 2 26 26 H 1.08997 * 109.47078 * 298.44936 * 7 6 5 27 27 H 1.09003 * 109.46877 * 58.45121 * 7 6 5 28 28 H 0.96704 * 113.99719 * 180.02562 * 8 7 6 29 29 H 0.97000 * 120.00245 * 115.14054 * 9 6 5 30 30 H 1.07997 * 124.58732 * 359.97438 * 13 12 10 31 31 H 1.09003 * 109.46987 * 239.97573 * 16 15 14 32 32 H 0.96705 * 113.99976 * 179.97438 * 17 16 15 33 33 H 1.48500 * 109.99952 * 298.68137 * 18 16 15 34 34 H 1.48499 * 109.99733 * 59.99916 * 18 16 15 35 35 H 1.07996 * 123.45707 * 180.23327 * 19 15 14 36 36 H 1.08995 * 113.61241 * 334.56774 * 20 3 2 37 37 H 1.09005 * 113.60958 * 105.38522 * 20 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 1 1.3143 2.0797 0.3227 5 6 3.3756 1.3718 0.7045 6 6 3.8228 2.3181 -0.4221 7 6 3.5414 3.7936 -0.1312 8 8 4.0223 4.5927 -1.2139 9 7 5.1936 2.0785 -0.8803 10 6 6.2296 2.2855 -0.0434 11 8 6.0233 2.5826 1.1179 12 6 7.6105 2.1523 -0.5349 13 6 7.9217 1.8242 -1.8177 14 16 9.6112 1.7598 -2.0338 15 6 9.9171 2.1850 -0.3588 16 6 11.2865 2.3338 0.2525 17 8 11.4441 3.6640 0.7500 18 14 12.5840 1.9968 -1.0413 19 6 8.7745 2.3634 0.2936 20 6 2.7535 1.6488 -1.3017 21 1 -0.3633 0.5139 0.8899 22 1 -0.3633 0.5138 -0.8900 23 1 -0.3634 -1.0276 -0.0005 24 1 3.3384 1.8470 1.6848 25 1 3.9088 0.4212 0.7139 26 1 2.4676 3.9433 -0.0182 27 1 4.0478 4.0855 0.7888 28 1 3.8776 5.5416 -1.0969 29 1 5.3555 1.7709 -1.7858 30 1 7.1964 1.6308 -2.5942 31 1 11.3977 1.6238 1.0720 32 1 12.3044 3.8318 1.1586 33 1 12.4509 0.6058 -1.5439 34 1 12.4431 2.9582 -2.1643 35 1 8.7210 2.6346 1.3376 36 1 3.1167 0.7740 -1.8409 37 1 2.2134 2.3465 -1.9418 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18341582_6894386.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:36 Heat of formation + Delta-G solvation = -93.656521 kcal Electronic energy + Delta-G solvation = -22389.985077 eV Core-core repulsion = 18841.056876 eV Total energy + Delta-G solvation = -3548.928201 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 300.091 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.88739 -40.21424 -38.70670 -38.00698 -37.16288 -36.71963 -34.44724 -31.86260 -28.75977 -27.31832 -27.02738 -26.91997 -26.03502 -23.72962 -21.89939 -20.52382 -20.29929 -18.87325 -18.60083 -18.43099 -18.11589 -17.89532 -16.90120 -16.47516 -16.28489 -16.03440 -16.01707 -15.71130 -15.32984 -15.24204 -14.65952 -14.34044 -13.97365 -13.93610 -13.80118 -13.69626 -13.53848 -13.11186 -12.73977 -12.69589 -12.54029 -12.35534 -12.11901 -11.93036 -11.81271 -11.29082 -10.81925 -10.55410 -10.50871 -10.26939 -10.00961 -9.61939 -5.20425 -0.46606 0.26245 0.60364 0.74496 1.19181 1.59560 1.88103 1.93627 2.20129 2.82673 2.94860 3.18624 3.32778 3.49981 3.61922 3.67546 3.78759 3.91228 3.95908 4.12597 4.19628 4.32168 4.41321 4.44162 4.52021 4.53537 4.58455 4.61469 4.62602 4.81123 4.85950 4.87086 4.90020 4.97230 5.06082 5.38815 6.20245 6.39049 6.71863 6.83972 7.08044 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.397 6.397 3 C 0.067 3.933 4 H 0.112 0.888 5 C -0.131 4.131 6 C 0.151 3.849 7 C 0.086 3.914 8 O -0.580 6.580 9 N -0.691 5.691 10 C 0.582 3.418 11 O -0.570 6.570 12 C -0.177 4.177 13 C -0.186 4.186 14 S 0.184 5.816 15 C -0.210 4.210 16 C -0.049 4.049 17 O -0.564 6.564 18 Si 0.761 3.239 19 C -0.070 4.070 20 C -0.139 4.139 21 H 0.052 0.948 22 H 0.054 0.946 23 H 0.092 0.908 24 H 0.075 0.925 25 H 0.083 0.917 26 H 0.082 0.918 27 H 0.042 0.958 28 H 0.397 0.603 29 H 0.411 0.589 30 H 0.200 0.800 31 H 0.101 0.899 32 H 0.406 0.594 33 H -0.261 1.261 34 H -0.273 1.273 35 H 0.143 0.857 36 H 0.100 0.900 37 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.887 -0.093 -2.361 2.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.316 6.316 3 C 0.009 3.991 4 H 0.130 0.870 5 C -0.169 4.169 6 C 0.065 3.935 7 C 0.007 3.993 8 O -0.388 6.388 9 N -0.342 5.342 10 C 0.369 3.631 11 O -0.450 6.450 12 C -0.195 4.195 13 C -0.324 4.324 14 S 0.449 5.551 15 C -0.326 4.326 16 C -0.161 4.161 17 O -0.374 6.374 18 Si 0.662 3.338 19 C -0.099 4.099 20 C -0.177 4.177 21 H 0.070 0.930 22 H 0.073 0.927 23 H 0.110 0.890 24 H 0.094 0.906 25 H 0.101 0.899 26 H 0.100 0.900 27 H 0.060 0.940 28 H 0.247 0.753 29 H 0.248 0.752 30 H 0.217 0.783 31 H 0.119 0.881 32 H 0.258 0.742 33 H -0.187 1.187 34 H -0.199 1.199 35 H 0.161 0.839 36 H 0.118 0.882 37 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges 1.480 -1.099 -4.078 4.476 hybrid contribution -1.757 0.935 1.446 2.460 sum -0.277 -0.165 -2.633 2.652 Atomic orbital electron populations 1.22998 0.79483 1.03832 1.01079 1.87929 1.21514 1.27566 1.94625 1.23654 0.93586 0.85951 0.95952 0.87024 1.23503 0.95785 0.99282 0.98361 1.21506 0.81196 0.93487 0.97357 1.22224 0.98981 0.88743 0.89344 1.86392 1.84825 1.23189 1.44370 1.45486 1.04737 1.67768 1.16246 1.17715 0.84426 0.75935 0.85065 1.90753 1.86104 1.49614 1.18571 1.20253 0.93967 1.10986 0.94252 1.26093 1.02688 1.03518 1.00113 1.83118 0.98870 1.65495 1.07606 1.23823 0.98941 1.12105 0.97756 1.24320 0.96759 0.88593 1.06405 1.86469 1.42636 1.27630 1.80703 0.93658 0.84929 0.78580 0.76586 1.21028 0.89427 0.98432 1.00980 1.23750 0.95428 1.01058 0.97430 0.92960 0.92713 0.88966 0.90627 0.89885 0.89997 0.94007 0.75307 0.75195 0.78258 0.88088 0.74215 1.18660 1.19929 0.83894 0.88189 0.88564 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 10.85 113.37 1.23 1.19 16 2 O -0.40 -1.59 10.71 -148.98 -1.60 -3.19 16 3 C 0.07 0.04 3.96 31.12 0.12 0.16 16 4 H 0.11 -0.40 7.40 -2.39 -0.02 -0.42 16 5 C -0.13 -0.62 6.40 31.12 0.20 -0.42 16 6 C 0.15 0.45 0.91 4.13 0.00 0.46 16 7 C 0.09 0.19 6.17 71.98 0.44 0.64 16 8 O -0.58 -1.45 13.39 -148.98 -1.99 -3.44 16 9 N -0.69 -3.00 4.94 -423.97 -2.10 -5.09 16 10 C 0.58 6.10 7.45 86.59 0.65 6.74 16 11 O -0.57 -9.82 15.33 -4.13 -0.06 -9.88 16 12 C -0.18 -1.46 5.98 -19.87 -0.12 -1.58 16 13 C -0.19 -0.49 10.38 67.30 0.70 0.21 16 14 S 0.18 0.62 20.18 -56.49 -1.14 -0.52 16 15 C -0.21 -1.29 5.72 24.51 0.14 -1.15 16 16 C -0.05 -0.02 2.94 71.24 0.21 0.19 16 17 O -0.56 -0.66 12.82 -148.98 -1.91 -2.57 16 18 Si 0.76 -2.23 30.91 68.60 2.12 -0.11 16 19 C -0.07 -0.67 9.91 22.67 0.22 -0.45 16 20 C -0.14 0.11 7.18 31.12 0.22 0.33 16 21 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 22 H 0.05 -0.23 8.14 -2.38 -0.02 -0.25 16 23 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 24 H 0.08 0.47 8.10 -2.39 -0.02 0.45 16 25 H 0.08 0.67 8.14 -2.39 -0.02 0.65 16 26 H 0.08 -0.26 7.35 -2.39 -0.02 -0.28 16 27 H 0.04 0.28 7.42 -2.39 -0.02 0.27 16 28 H 0.40 -2.01 9.12 -74.05 -0.68 -2.68 16 29 H 0.41 -0.28 7.22 -92.71 -0.67 -0.95 16 30 H 0.20 -0.87 7.02 -2.91 -0.02 -0.89 16 31 H 0.10 -0.34 7.96 -2.39 -0.02 -0.36 16 32 H 0.41 -4.07 8.74 -74.05 -0.65 -4.72 16 33 H -0.26 -0.23 7.11 99.48 0.71 0.47 16 34 H -0.27 -0.96 7.11 99.48 0.71 -0.25 16 35 H 0.14 1.65 8.06 -2.91 -0.02 1.63 16 36 H 0.10 -0.07 8.14 -2.39 -0.02 -0.09 16 37 H 0.10 -0.29 8.10 -2.38 -0.02 -0.31 16 Total: 0.00 -23.25 327.54 -3.49 -26.73 By element: Atomic # 1 Polarization: -7.43 SS G_CDS: -0.83 Total: -8.26 kcal Atomic # 6 Polarization: 2.30 SS G_CDS: 4.02 Total: 6.33 kcal Atomic # 7 Polarization: -3.00 SS G_CDS: -2.10 Total: -5.09 kcal Atomic # 8 Polarization: -13.51 SS G_CDS: -5.56 Total: -19.08 kcal Atomic # 14 Polarization: -2.23 SS G_CDS: 2.12 Total: -0.11 kcal Atomic # 16 Polarization: 0.62 SS G_CDS: -1.14 Total: -0.52 kcal Total: -23.25 -3.49 -26.73 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18341582_6894386.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.924 kcal (2) G-P(sol) polarization free energy of solvation -23.246 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.170 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.486 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.732 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.657 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds