Wall clock time and date at job start Tue Mar 9 2021 12:57:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81399 * 1 3 3 C 1.81402 * 102.99864 * 2 1 4 4 H 1.08996 * 112.84775 * 43.80025 * 3 2 1 5 5 C 1.53782 * 113.61397 * 175.00266 * 3 2 1 6 6 C 1.53781 * 87.08224 * 139.97866 * 5 3 2 7 7 H 1.09006 * 113.61315 * 89.19522 * 6 5 3 8 8 C 1.52997 * 113.61559 * 220.01642 * 6 5 3 9 9 N 1.46497 * 109.46983 * 185.00108 * 8 6 5 10 10 C 1.34780 * 119.99566 * 180.02562 * 9 8 6 11 11 O 1.21280 * 120.00423 * 359.97438 * 10 9 8 12 12 C 1.50701 * 119.99795 * 180.02562 * 10 9 8 13 13 C 1.50703 * 109.47064 * 179.97438 * 12 10 9 14 14 C 1.38234 * 119.99770 * 269.72517 * 13 12 10 15 15 C 1.38239 * 119.99901 * 179.76875 * 14 13 12 16 16 C 1.38240 * 119.99645 * 0.50240 * 15 14 13 17 17 C 1.50698 * 119.99659 * 179.72727 * 16 15 14 18 18 O 1.42902 * 109.47191 * 245.02464 * 17 16 15 19 19 Si 1.86305 * 109.47327 * 5.02366 * 17 16 15 20 20 C 1.38227 * 120.00205 * 359.74956 * 16 15 14 21 21 C 1.38232 * 119.99860 * 89.99959 * 13 12 10 22 22 C 1.53782 * 113.61210 * 272.49884 * 3 2 1 23 23 H 1.09006 * 109.47090 * 180.02562 * 1 2 3 24 24 H 1.09000 * 109.47418 * 300.00148 * 1 2 3 25 25 H 1.08993 * 109.47358 * 60.00460 * 1 2 3 26 26 H 1.08994 * 113.61682 * 25.42832 * 5 3 2 27 27 H 1.09005 * 113.68520 * 254.53705 * 5 3 2 28 28 H 1.09001 * 109.46832 * 64.99925 * 8 6 5 29 29 H 1.09002 * 109.47153 * 305.00115 * 8 6 5 30 30 H 0.96995 * 120.00423 * 359.97438 * 9 8 6 31 31 H 1.09002 * 109.47060 * 299.99722 * 12 10 9 32 32 H 1.09001 * 109.47380 * 59.99809 * 12 10 9 33 33 H 1.07998 * 120.00015 * 0.02562 * 14 13 12 34 34 H 1.08001 * 119.99843 * 180.23314 * 15 14 13 35 35 H 1.09005 * 109.47093 * 125.02619 * 17 16 15 36 36 H 0.96698 * 113.99980 * 59.99946 * 18 17 16 37 37 H 1.48501 * 109.99791 * 180.02562 * 19 17 16 38 38 H 1.48501 * 109.99886 * 301.31841 * 19 17 16 39 39 H 1.07996 * 120.00251 * 179.97438 * 20 16 15 40 40 H 1.07998 * 120.00407 * 0.02562 * 21 13 12 41 41 H 1.08998 * 113.61766 * 105.46878 * 22 3 2 42 42 H 1.08998 * 113.61542 * 334.56587 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2220 1.7675 0.0000 4 1 1.6108 2.3430 0.6952 5 6 3.7283 2.0520 0.1227 6 6 3.5205 3.1738 -0.9084 7 1 3.2656 4.1352 -0.4624 8 6 4.6478 3.2766 -1.9377 9 7 4.4200 4.4413 -2.7967 10 6 5.2914 4.7318 -3.7830 11 8 6.2642 4.0294 -3.9593 12 6 5.0574 5.9303 -4.6663 13 6 6.1677 6.0314 -5.6802 14 6 7.3039 6.7634 -5.3902 15 6 8.3245 6.8523 -6.3184 16 6 8.2043 6.2177 -7.5406 17 6 9.3142 6.3197 -8.5549 18 8 8.8460 7.0290 -9.7037 19 14 10.7567 7.2315 -7.8074 20 6 7.0659 5.4900 -7.8326 21 6 6.0475 5.3969 -6.9024 22 6 2.3007 2.3815 -1.4077 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3634 0.5138 0.8900 25 1 -0.3634 0.5137 -0.8900 26 1 4.3572 1.2382 -0.2381 27 1 4.0269 2.4134 1.1068 28 1 4.6664 2.3734 -2.5476 29 1 5.6018 3.3865 -1.4220 30 1 3.6418 5.0029 -2.6560 31 1 4.1031 5.8210 -5.1816 32 1 5.0396 6.8334 -4.0562 33 1 7.3960 7.2625 -4.4369 34 1 9.2138 7.4211 -6.0903 35 1 9.6302 5.3189 -8.8496 36 1 8.5479 7.9294 -9.5155 37 1 11.8578 7.3393 -8.7980 38 1 10.3311 8.5861 -7.3725 39 1 6.9718 4.9946 -8.7876 40 1 5.1578 4.8290 -7.1309 41 1 1.4455 3.0089 -1.6589 42 1 2.5393 1.6578 -2.1870 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18360570_12335836.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:07 Heat of formation + Delta-G solvation = -21.395377 kcal Electronic energy + Delta-G solvation = -22014.960133 eV Core-core repulsion = 18667.228416 eV Total energy + Delta-G solvation = -3347.731717 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.123 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -41.20132 -40.41433 -39.62732 -37.69108 -35.45702 -34.04741 -31.89916 -30.58424 -29.93450 -28.75581 -26.88911 -25.74939 -24.03804 -23.77863 -22.17267 -21.46358 -20.58610 -18.53630 -18.25261 -17.62541 -17.13233 -16.98273 -16.72311 -16.47005 -16.14115 -16.04823 -15.70187 -15.32024 -14.90829 -14.78544 -14.67814 -14.47274 -14.30763 -14.17809 -13.86757 -13.63720 -13.57383 -13.24950 -13.20000 -12.88405 -12.75675 -12.21370 -12.04330 -11.96749 -11.86138 -11.52413 -11.51235 -10.91351 -10.79999 -10.52393 -10.08743 -9.81531 -9.58916 -8.67767 -4.89994 0.28452 0.51442 0.69715 1.33889 1.55039 1.63025 1.68023 1.99572 2.12182 2.80830 3.25693 3.30022 3.42953 3.47637 3.58893 3.62127 3.78796 3.86419 3.92891 4.06187 4.07838 4.14539 4.17231 4.19654 4.24556 4.38906 4.50400 4.51339 4.58189 4.61073 4.62983 4.70667 4.72944 4.73621 4.83054 4.91100 5.03453 5.11479 5.19803 5.40442 5.42828 5.59167 5.62496 6.04494 6.44928 6.45207 7.24283 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.254 6.254 3 C -0.084 4.084 4 H 0.106 0.894 5 C -0.101 4.101 6 C -0.121 4.121 7 H 0.101 0.899 8 C 0.131 3.869 9 N -0.733 5.733 10 C 0.513 3.487 11 O -0.526 6.526 12 C -0.104 4.104 13 C -0.062 4.062 14 C -0.100 4.100 15 C -0.116 4.116 16 C -0.117 4.117 17 C -0.075 4.075 18 O -0.530 6.530 19 Si 0.687 3.313 20 C -0.090 4.090 21 C -0.104 4.104 22 C -0.123 4.123 23 H 0.101 0.899 24 H 0.076 0.924 25 H 0.077 0.923 26 H 0.095 0.905 27 H 0.083 0.917 28 H 0.072 0.928 29 H 0.071 0.929 30 H 0.401 0.599 31 H 0.104 0.896 32 H 0.104 0.896 33 H 0.124 0.876 34 H 0.126 0.874 35 H 0.118 0.882 36 H 0.375 0.625 37 H -0.258 1.258 38 H -0.261 1.261 39 H 0.125 0.875 40 H 0.122 0.878 41 H 0.073 0.927 42 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.572 2.688 3.802 6.526 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.025 6.025 3 C -0.213 4.213 4 H 0.124 0.876 5 C -0.140 4.140 6 C -0.141 4.141 7 H 0.119 0.881 8 C 0.007 3.993 9 N -0.386 5.386 10 C 0.299 3.701 11 O -0.401 6.401 12 C -0.143 4.143 13 C -0.063 4.063 14 C -0.118 4.118 15 C -0.134 4.134 16 C -0.117 4.117 17 C -0.185 4.185 18 O -0.336 6.336 19 Si 0.588 3.412 20 C -0.108 4.108 21 C -0.122 4.122 22 C -0.163 4.163 23 H 0.119 0.881 24 H 0.095 0.905 25 H 0.096 0.904 26 H 0.114 0.886 27 H 0.101 0.899 28 H 0.090 0.910 29 H 0.089 0.911 30 H 0.235 0.765 31 H 0.122 0.878 32 H 0.123 0.877 33 H 0.142 0.858 34 H 0.144 0.856 35 H 0.136 0.864 36 H 0.222 0.778 37 H -0.183 1.183 38 H -0.186 1.186 39 H 0.143 0.857 40 H 0.140 0.860 41 H 0.091 0.909 42 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -2.524 1.380 3.356 4.421 hybrid contribution -2.270 1.895 -0.312 2.974 sum -4.794 3.276 3.044 6.556 Atomic orbital electron populations 1.23371 0.94134 1.06646 1.04916 1.87010 1.07556 1.10348 1.97627 1.24679 1.01080 0.94333 1.01205 0.87619 1.22765 0.93341 0.97967 0.99910 1.22760 0.95716 0.98896 0.96720 0.88115 1.21350 0.98009 0.88675 0.91263 1.46002 1.27943 1.30584 1.34026 1.20559 0.82692 0.86298 0.80598 1.90768 1.28623 1.50865 1.69826 1.20692 0.99255 0.97785 0.96609 1.19271 0.95061 0.97716 0.94251 1.20903 0.92965 0.98917 0.99052 1.20986 0.98741 0.99982 0.93678 1.20248 0.96812 0.99213 0.95440 1.25027 1.01634 1.02846 0.89030 1.86603 1.84350 1.30517 1.32143 0.94837 0.78264 0.82324 0.85747 1.20966 0.92778 0.97827 0.99262 1.21017 0.99184 0.98709 0.93298 1.23413 0.98104 0.99123 0.95612 0.88054 0.90500 0.90433 0.88605 0.89883 0.90989 0.91057 0.76539 0.87777 0.87744 0.85827 0.85614 0.86446 0.77751 1.18270 1.18573 0.85658 0.86003 0.90866 0.88426 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.17 10.76 101.05 1.09 1.26 16 2 S -0.25 -0.18 22.17 -107.50 -2.38 -2.57 16 3 C -0.08 0.14 4.28 -25.92 -0.11 0.03 16 4 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 5 C -0.10 0.21 7.23 -25.92 -0.19 0.03 16 6 C -0.12 0.39 3.75 -89.81 -0.34 0.06 16 7 H 0.10 -0.44 8.14 -51.93 -0.42 -0.86 16 8 C 0.13 -0.18 5.51 -4.04 -0.02 -0.21 16 9 N -0.73 1.52 5.56 -60.30 -0.33 1.18 16 10 C 0.51 0.32 7.82 -10.98 -0.09 0.23 16 11 O -0.53 -2.80 16.03 5.56 0.09 -2.71 16 12 C -0.10 0.19 5.83 -29.03 -0.17 0.02 16 13 C -0.06 -0.05 4.37 -104.62 -0.46 -0.51 16 14 C -0.10 -0.09 9.70 -39.58 -0.38 -0.48 16 15 C -0.12 -0.12 8.67 -39.58 -0.34 -0.46 16 16 C -0.12 -0.18 5.35 -104.63 -0.56 -0.73 16 17 C -0.08 -0.07 2.80 36.00 0.10 0.03 16 18 O -0.53 -1.09 12.83 -35.23 -0.45 -1.54 16 19 Si 0.69 0.03 29.88 -169.99 -5.08 -5.05 16 20 C -0.09 -0.17 9.69 -39.58 -0.38 -0.55 16 21 C -0.10 -0.14 9.70 -39.58 -0.38 -0.53 16 22 C -0.12 0.33 7.22 -25.92 -0.19 0.14 16 23 H 0.10 -0.17 8.14 -51.92 -0.42 -0.60 16 24 H 0.08 -0.16 8.14 -51.92 -0.42 -0.58 16 25 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 26 H 0.10 -0.11 8.06 -51.93 -0.42 -0.53 16 27 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 28 H 0.07 0.01 7.84 -51.93 -0.41 -0.40 16 29 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 30 H 0.40 -1.97 8.47 -40.82 -0.35 -2.32 16 31 H 0.10 -0.40 8.09 -51.93 -0.42 -0.82 16 32 H 0.10 -0.42 8.08 -51.93 -0.42 -0.84 16 33 H 0.12 -0.11 8.06 -52.49 -0.42 -0.53 16 34 H 0.13 -0.07 4.85 -52.49 -0.25 -0.33 16 35 H 0.12 0.05 7.96 -51.93 -0.41 -0.36 16 36 H 0.38 -0.32 8.70 45.56 0.40 0.07 16 37 H -0.26 -0.82 7.11 56.52 0.40 -0.42 16 38 H -0.26 -0.43 7.01 56.52 0.40 -0.03 16 39 H 0.13 0.15 8.06 -52.49 -0.42 -0.27 16 40 H 0.12 -0.01 8.06 -52.49 -0.42 -0.43 16 41 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 42 H 0.10 -0.14 7.85 -51.93 -0.41 -0.55 16 LS Contribution 362.50 15.07 5.46 5.46 Total: 0.00 -8.04 362.50 -11.67 -19.70 By element: Atomic # 1 Polarization: -6.26 SS G_CDS: -6.54 Total: -12.80 kcal Atomic # 6 Polarization: 0.75 SS G_CDS: -2.42 Total: -1.67 kcal Atomic # 7 Polarization: 1.52 SS G_CDS: -0.33 Total: 1.18 kcal Atomic # 8 Polarization: -3.89 SS G_CDS: -0.36 Total: -4.26 kcal Atomic # 14 Polarization: 0.03 SS G_CDS: -5.08 Total: -5.05 kcal Atomic # 16 Polarization: -0.18 SS G_CDS: -2.38 Total: -2.57 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -8.04 -11.67 -19.70 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18360570_12335836.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.693 kcal (2) G-P(sol) polarization free energy of solvation -8.035 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -9.728 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.667 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.702 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.395 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds