Wall clock time and date at job start Tue Mar 9 2021 12:57:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35660 * 116.99596 * 2 1 4 4 C 1.40144 * 120.14418 * 180.02562 * 3 2 1 5 5 C 1.47531 * 120.19037 * 0.04510 * 4 3 2 6 6 O 1.21588 * 120.00417 * 359.97438 * 5 4 3 7 7 N 1.34783 * 119.99860 * 179.97438 * 5 4 3 8 8 C 1.46495 * 120.00035 * 180.02562 * 7 5 4 9 9 C 1.53006 * 109.46951 * 180.02562 * 8 7 5 10 10 H 1.08998 * 112.84721 * 316.18891 * 9 8 7 11 11 C 1.53782 * 113.61486 * 87.50075 * 9 8 7 12 12 C 1.53787 * 87.07868 * 139.97871 * 11 9 8 13 13 H 1.09004 * 113.68851 * 89.12490 * 12 11 9 14 14 S 1.81398 * 113.61533 * 220.01386 * 12 11 9 15 15 C 1.81396 * 103.00074 * 272.50258 * 14 12 11 16 16 C 1.53781 * 87.08324 * 334.57026 * 12 11 9 17 17 C 1.39707 * 119.61420 * 180.02562 * 4 3 2 18 18 C 1.37788 * 119.91033 * 359.97438 * 17 4 3 19 19 C 1.50699 * 119.85099 * 180.02562 * 18 17 4 20 20 O 1.42901 * 109.46830 * 300.00212 * 19 18 17 21 21 Si 1.86298 * 109.46950 * 180.02562 * 19 18 17 22 22 C 1.38552 * 120.29591 * 0.27805 * 18 17 4 23 23 C 1.38055 * 120.39254 * 359.44677 * 22 18 17 24 24 H 1.08999 * 109.47333 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.46813 * 300.00307 * 1 2 3 26 26 H 1.08997 * 109.47287 * 59.99350 * 1 2 3 27 27 H 0.97004 * 119.99713 * 0.02562 * 7 5 4 28 28 H 1.09002 * 109.47340 * 299.99370 * 8 7 5 29 29 H 1.09000 * 109.47441 * 60.00323 * 8 7 5 30 30 H 1.08997 * 113.61531 * 254.52882 * 11 9 8 31 31 H 1.09001 * 113.61295 * 25.43491 * 11 9 8 32 32 H 1.08996 * 109.47069 * 60.00103 * 15 14 12 33 33 H 1.09001 * 109.46739 * 179.97438 * 15 14 12 34 34 H 1.08999 * 109.47142 * 299.99493 * 15 14 12 35 35 H 1.09009 * 113.60809 * 270.88284 * 16 12 11 36 36 H 1.08992 * 113.69457 * 139.99422 * 16 12 11 37 37 H 1.08001 * 120.04266 * 180.02562 * 17 4 3 38 38 H 1.08991 * 109.47351 * 60.00360 * 19 18 17 39 39 H 0.96708 * 114.00246 * 299.99864 * 20 19 18 40 40 H 1.48506 * 109.99834 * 180.02562 * 21 19 18 41 41 H 1.48502 * 110.00011 * 301.31529 * 21 19 18 42 42 H 1.08010 * 119.79949 * 179.70095 * 22 18 17 43 43 H 1.08000 * 119.95537 * 180.25477 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2088 0.0000 4 6 3.4442 1.2857 -0.0005 5 6 4.2550 0.0532 -0.0021 6 8 3.7095 -1.0334 -0.0025 7 7 5.6005 0.1317 -0.0032 8 6 6.4057 -1.0921 -0.0053 9 6 7.8911 -0.7253 -0.0055 10 1 8.1279 0.0809 -0.6998 11 6 8.4751 -0.5200 1.4023 12 6 9.7329 -1.2494 0.9012 13 1 10.4750 -0.5869 0.4557 14 16 10.4463 -2.3882 2.1197 15 6 11.5593 -1.3200 3.0739 16 6 8.8256 -1.9402 -0.1305 17 6 4.0668 2.5364 0.0000 18 6 3.3038 3.6838 0.0005 19 6 3.9768 5.0321 0.0005 20 8 4.7927 5.1571 1.1670 21 14 2.6825 6.3721 0.0021 22 6 1.9206 3.6033 0.0063 23 6 1.2924 2.3740 0.0001 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3633 0.5139 0.8900 26 1 -0.3634 0.5139 -0.8899 27 1 6.0357 0.9987 -0.0025 28 1 6.1769 -1.6791 0.8842 29 1 6.1754 -1.6770 -0.8958 30 1 8.6484 0.5261 1.6548 31 1 7.9377 -1.0611 2.1811 32 1 10.9847 -0.5176 3.5366 33 1 12.0511 -1.9078 3.8490 34 1 12.3106 -0.8926 2.4099 35 1 8.3840 -2.8696 0.2294 36 1 9.2806 -2.0415 -1.1157 37 1 5.1447 2.6038 -0.0008 38 1 4.5984 5.1280 -0.8896 39 1 4.3046 5.0819 1.9985 40 1 3.3335 7.7069 0.0015 41 1 1.8071 6.2341 -1.1894 42 1 1.3304 4.5079 0.0116 43 1 0.2138 2.3196 0.0006 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18360570_12496546.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:35 Heat of formation + Delta-G solvation = -46.476571 kcal Electronic energy + Delta-G solvation = -24980.970034 eV Core-core repulsion = 21313.468523 eV Total energy + Delta-G solvation = -3667.501511 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.123 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.73311 -40.47545 -39.42777 -39.20897 -37.18527 -35.37242 -32.82744 -31.87847 -29.99231 -29.36560 -28.49654 -26.82089 -26.23040 -25.31907 -23.92347 -22.44993 -21.51629 -20.59695 -19.53133 -18.45438 -18.09605 -17.65265 -17.00054 -16.90771 -16.79484 -16.38648 -16.21509 -15.97478 -15.92844 -15.78401 -15.21472 -14.76751 -14.73177 -14.58818 -14.35730 -14.24792 -14.10874 -13.70698 -13.56660 -13.49537 -13.45373 -13.17295 -12.78526 -12.45277 -12.16560 -12.11090 -11.97274 -11.85429 -11.80075 -11.44218 -10.86427 -10.76505 -10.44723 -10.24540 -9.95100 -9.28042 -8.62538 -5.13349 -0.25476 0.18144 0.75008 1.19814 1.53166 1.60275 1.87477 1.90534 2.17797 2.22280 2.74323 3.31058 3.34166 3.35832 3.49179 3.54258 3.62124 3.64069 3.69446 3.95208 4.05328 4.12026 4.19227 4.19468 4.19739 4.21971 4.27401 4.33173 4.45376 4.56607 4.58669 4.63218 4.65803 4.69971 4.76198 4.79945 4.86175 4.91870 4.98427 5.06256 5.21785 5.27239 5.47659 5.51992 6.28356 6.47163 6.57653 7.37211 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.192 3.808 4 C -0.174 4.174 5 C 0.560 3.440 6 O -0.516 6.516 7 N -0.730 5.730 8 C 0.133 3.867 9 C -0.121 4.121 10 H 0.100 0.900 11 C -0.123 4.123 12 C -0.084 4.084 13 H 0.105 0.895 14 S -0.255 6.255 15 C -0.122 4.122 16 C -0.100 4.100 17 C -0.020 4.020 18 C -0.169 4.169 19 C -0.062 4.062 20 O -0.541 6.541 21 Si 0.686 3.314 22 C -0.048 4.048 23 C -0.214 4.214 24 H 0.105 0.895 25 H 0.059 0.941 26 H 0.058 0.942 27 H 0.398 0.602 28 H 0.073 0.927 29 H 0.072 0.928 30 H 0.073 0.927 31 H 0.098 0.902 32 H 0.077 0.923 33 H 0.100 0.900 34 H 0.076 0.924 35 H 0.096 0.904 36 H 0.082 0.918 37 H 0.135 0.865 38 H 0.114 0.886 39 H 0.380 0.620 40 H -0.254 1.254 41 H -0.257 1.257 42 H 0.134 0.866 43 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.359 4.562 1.307 4.936 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.178 4.178 5 C 0.347 3.653 6 O -0.391 6.391 7 N -0.383 5.383 8 C 0.009 3.991 9 C -0.142 4.142 10 H 0.118 0.882 11 C -0.162 4.162 12 C -0.212 4.212 13 H 0.124 0.876 14 S -0.026 6.026 15 C -0.291 4.291 16 C -0.139 4.139 17 C -0.039 4.039 18 C -0.170 4.170 19 C -0.173 4.173 20 O -0.346 6.346 21 Si 0.588 3.412 22 C -0.066 4.066 23 C -0.232 4.232 24 H 0.123 0.877 25 H 0.078 0.922 26 H 0.076 0.924 27 H 0.233 0.767 28 H 0.091 0.909 29 H 0.090 0.910 30 H 0.092 0.908 31 H 0.116 0.884 32 H 0.096 0.904 33 H 0.119 0.881 34 H 0.095 0.905 35 H 0.114 0.886 36 H 0.101 0.899 37 H 0.153 0.847 38 H 0.132 0.868 39 H 0.227 0.773 40 H -0.178 1.178 41 H -0.182 1.182 42 H 0.151 0.849 43 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -1.683 3.195 0.599 3.660 hybrid contribution 0.684 1.549 -0.500 1.765 sum -0.999 4.744 0.098 4.849 Atomic orbital electron populations 1.23238 0.78188 1.04778 1.01438 1.86390 1.21198 1.25172 1.86161 1.19100 0.90961 0.85067 0.90518 1.19347 0.90904 0.93916 1.13592 1.17942 0.81841 0.88662 0.76851 1.90853 1.71525 1.28597 1.48157 1.45879 1.05914 1.09884 1.76654 1.21345 0.88134 0.86674 1.02903 1.22764 0.93486 0.99525 0.98391 0.88152 1.23417 0.94935 1.01057 0.96838 1.24679 0.98644 0.99729 0.98184 0.87634 1.86985 1.55476 1.20454 1.39675 1.23368 1.00881 1.02334 1.02477 1.22762 0.94965 0.97699 0.98501 1.20954 0.99870 0.89839 0.93208 1.20119 0.93541 0.96016 1.07325 1.24955 1.01817 0.99250 0.91260 1.86496 1.37325 1.95383 1.15443 0.94779 0.80204 0.77635 0.88577 1.20993 0.93650 0.97326 0.94615 1.21233 1.00753 0.91565 1.09677 0.87650 0.92249 0.92356 0.76660 0.90860 0.91000 0.90804 0.88368 0.90408 0.88086 0.90518 0.88586 0.89906 0.84730 0.86823 0.77267 1.17838 1.18240 0.84920 0.84128 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.98 16 2 O -0.28 -1.00 8.57 -40.56 -0.35 -1.35 16 3 C 0.19 0.44 6.70 -38.70 -0.26 0.19 16 4 C -0.17 -0.38 5.89 -104.84 -0.62 -0.99 16 5 C 0.56 2.09 7.76 -12.47 -0.10 2.00 16 6 O -0.52 -3.98 15.16 -16.59 -0.25 -4.24 16 7 N -0.73 -0.29 5.51 -61.35 -0.34 -0.63 16 8 C 0.13 0.01 5.51 -4.04 -0.02 -0.01 16 9 C -0.12 0.24 3.75 -89.80 -0.34 -0.09 16 10 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 11 C -0.12 0.19 7.22 -25.91 -0.19 0.01 16 12 C -0.08 0.07 4.28 -25.92 -0.11 -0.04 16 13 H 0.11 -0.16 8.14 -51.93 -0.42 -0.58 16 14 S -0.25 -0.34 22.17 -107.50 -2.38 -2.72 16 15 C -0.12 0.10 10.76 101.05 1.09 1.19 16 16 C -0.10 0.13 7.23 -25.92 -0.19 -0.06 16 17 C -0.02 0.01 9.09 -39.20 -0.36 -0.35 16 18 C -0.17 0.17 5.39 -104.67 -0.56 -0.39 16 19 C -0.06 0.10 2.82 36.01 0.10 0.20 16 20 O -0.54 0.74 12.76 -35.23 -0.45 0.29 16 21 Si 0.69 -1.50 29.77 -169.99 -5.06 -6.56 16 22 C -0.05 0.07 8.66 -39.53 -0.34 -0.28 16 23 C -0.21 0.08 9.03 -39.48 -0.36 -0.27 16 24 H 0.11 -0.18 8.14 -51.93 -0.42 -0.60 16 25 H 0.06 -0.15 7.66 -51.93 -0.40 -0.54 16 26 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 27 H 0.40 -0.83 6.50 -40.82 -0.27 -1.10 16 28 H 0.07 0.10 7.84 -51.93 -0.41 -0.31 16 29 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 30 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.10 -0.04 7.85 -51.93 -0.41 -0.45 16 32 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 33 H 0.10 -0.12 8.14 -51.92 -0.42 -0.55 16 34 H 0.08 -0.11 8.14 -51.92 -0.42 -0.53 16 35 H 0.10 -0.04 8.06 -51.92 -0.42 -0.46 16 36 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 37 H 0.14 -0.28 6.40 -52.49 -0.34 -0.62 16 38 H 0.11 -0.16 7.96 -51.93 -0.41 -0.57 16 39 H 0.38 -1.87 8.70 45.56 0.40 -1.48 16 40 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 41 H -0.26 -0.03 7.11 56.52 0.40 0.37 16 42 H 0.13 -0.47 4.85 -52.48 -0.25 -0.72 16 43 H 0.14 -0.37 6.30 -52.49 -0.33 -0.70 16 LS Contribution 365.11 15.07 5.50 5.50 Total: 0.00 -8.85 365.11 -10.82 -19.67 By element: Atomic # 1 Polarization: -5.81 SS G_CDS: -6.24 Total: -12.05 kcal Atomic # 6 Polarization: 3.33 SS G_CDS: -1.26 Total: 2.07 kcal Atomic # 7 Polarization: -0.29 SS G_CDS: -0.34 Total: -0.63 kcal Atomic # 8 Polarization: -4.24 SS G_CDS: -1.05 Total: -5.29 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.06 Total: -6.56 kcal Atomic # 16 Polarization: -0.34 SS G_CDS: -2.38 Total: -2.72 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -8.85 -10.82 -19.67 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18360570_12496546.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.803 kcal (2) G-P(sol) polarization free energy of solvation -8.853 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.656 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.820 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.674 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.477 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds