Wall clock time and date at job start Tue Mar 9 2021 12:57:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81393 * 1 3 3 C 1.81404 * 102.99831 * 2 1 4 4 H 1.08993 * 112.90848 * 316.25213 * 3 2 1 5 5 C 1.53962 * 113.66432 * 87.55391 * 3 2 1 6 6 C 1.53782 * 87.11063 * 139.88959 * 5 3 2 7 7 H 1.08996 * 113.68722 * 89.19879 * 6 5 3 8 8 C 1.53003 * 113.61259 * 220.08801 * 6 5 3 9 9 N 1.46493 * 109.47111 * 272.50057 * 8 6 5 10 10 C 1.34777 * 119.99981 * 180.02562 * 9 8 6 11 11 O 1.21281 * 119.99917 * 359.97438 * 10 9 8 12 12 C 1.50705 * 119.99857 * 179.97438 * 10 9 8 13 13 N 1.46507 * 109.46896 * 179.97438 * 12 10 9 14 14 C 1.35043 * 125.92773 * 125.00088 * 13 12 10 15 15 C 1.35081 * 107.97619 * 179.97438 * 14 13 12 16 16 C 1.50697 * 126.07650 * 180.02562 * 15 14 13 17 17 O 1.42895 * 109.47248 * 254.97668 * 16 15 14 18 18 Si 1.86301 * 109.46996 * 14.97617 * 16 15 14 19 19 C 1.40853 * 107.84838 * 0.02562 * 15 14 13 20 20 C 1.48423 * 126.03445 * 180.02562 * 19 15 14 21 21 C 1.39319 * 120.12068 * 324.72600 * 20 19 15 22 22 C 1.38026 * 119.87935 * 179.68123 * 21 20 19 23 23 C 1.38324 * 120.11614 * 0.61351 * 22 21 20 24 24 C 1.38325 * 120.24292 * 359.67995 * 23 22 21 25 25 C 1.38022 * 120.11826 * 359.97438 * 24 23 22 26 26 N 1.31615 * 107.92346 * 359.75315 * 19 15 14 27 27 C 1.53781 * 87.08260 * 334.63747 * 6 5 3 28 28 H 1.08995 * 109.47728 * 59.99829 * 1 2 3 29 29 H 1.09008 * 109.46736 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.47328 * 299.99521 * 1 2 3 31 31 H 1.08997 * 113.53543 * 25.33633 * 5 3 2 32 32 H 1.08994 * 113.66446 * 254.45836 * 5 3 2 33 33 H 1.08994 * 109.47052 * 32.49864 * 8 6 5 34 34 H 1.09002 * 109.46569 * 152.49796 * 8 6 5 35 35 H 0.97001 * 120.00454 * 359.97438 * 9 8 6 36 36 H 1.08994 * 109.47266 * 299.99773 * 12 10 9 37 37 H 1.08995 * 109.47440 * 59.99993 * 12 10 9 38 38 H 1.07996 * 126.01149 * 359.93885 * 14 13 12 39 39 H 1.09001 * 109.47379 * 134.97203 * 16 15 14 40 40 H 0.96697 * 114.00436 * 59.99820 * 17 16 15 41 41 H 1.48501 * 109.99999 * 180.02562 * 18 16 15 42 42 H 1.48504 * 109.99832 * 301.31563 * 18 16 15 43 43 H 1.08000 * 120.05841 * 359.97085 * 21 20 19 44 44 H 1.07992 * 119.94272 * 180.31545 * 22 21 20 45 45 H 1.07998 * 119.87578 * 179.69901 * 23 22 21 46 46 H 1.07999 * 119.94084 * 180.02562 * 24 23 22 47 47 H 1.08002 * 120.05922 * 180.02562 * 25 24 23 48 48 H 1.09002 * 113.61445 * 139.98212 * 27 6 5 49 49 H 1.09002 * 113.61408 * 270.79943 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8139 0.0000 0.0000 3 6 2.2219 1.7676 0.0000 4 1 1.6107 2.3441 -0.6942 5 6 2.3023 2.3832 1.4089 6 6 3.5231 3.1736 0.9091 7 1 3.2696 4.1356 0.4638 8 6 4.6513 3.2739 1.9378 9 7 4.4261 4.4384 2.7976 10 6 5.2990 4.7275 3.7829 11 8 6.2708 4.0233 3.9580 12 6 5.0677 5.9259 4.6670 13 7 6.1479 6.0218 5.6520 14 6 6.9379 7.0972 5.8594 15 6 7.8067 6.7918 6.8477 16 6 8.8720 7.7005 7.4049 17 8 10.1515 7.2867 6.9215 18 14 8.5401 9.4518 6.8630 19 6 7.5398 5.4733 7.2650 20 6 8.2582 4.7328 8.3321 21 6 9.6255 4.9254 8.5176 22 6 10.2874 4.2392 9.5157 23 6 9.5980 3.3521 10.3227 24 6 8.2416 3.1526 10.1389 25 6 7.5686 3.8389 9.1485 26 7 6.5371 5.0159 6.5455 27 6 3.7283 2.0521 -0.1228 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0278 0.0005 30 1 -0.3634 0.5137 0.8900 31 1 2.5402 1.6586 2.1876 32 1 1.4484 3.0120 1.6609 33 1 4.6687 2.3704 2.5472 34 1 5.6051 3.3824 1.4215 35 1 3.6491 5.0020 2.6573 36 1 5.0502 6.8292 4.0573 37 1 4.1140 5.8176 5.1835 38 1 6.8849 8.0359 5.3282 39 1 8.8608 7.6487 8.4936 40 1 10.2337 7.3077 5.9583 41 1 9.5842 10.3578 7.4055 42 1 8.5213 9.5297 5.3802 43 1 10.1657 5.6138 7.8846 44 1 11.3462 4.3914 9.6637 45 1 10.1207 2.8136 11.0994 46 1 7.7081 2.4592 10.7721 47 1 6.5094 3.6827 9.0061 48 1 4.0255 2.4135 -1.1072 49 1 4.3572 1.2376 0.2367 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18360570_12622748.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:39 Heat of formation + Delta-G solvation = 73.528298 kcal Electronic energy + Delta-G solvation = -30608.930461 eV Core-core repulsion = 26438.709462 eV Total energy + Delta-G solvation = -4170.220999 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.145 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.42863 -40.94449 -39.87957 -39.50127 -37.84596 -35.61526 -34.73292 -32.28027 -31.74163 -31.32281 -30.19977 -29.80451 -28.22455 -26.92322 -25.91706 -24.48718 -23.64253 -23.26277 -21.93960 -21.46124 -20.97136 -20.61678 -18.87656 -18.43420 -17.72424 -17.67498 -17.11370 -16.97922 -16.78170 -16.49077 -16.19512 -16.05062 -15.68335 -15.46742 -15.41759 -15.16988 -15.01007 -14.75758 -14.47998 -14.35370 -14.19297 -14.10661 -13.99076 -13.74612 -13.67245 -13.62098 -13.53180 -13.29820 -12.88708 -12.49322 -12.26611 -12.08605 -11.96641 -11.94095 -11.62964 -11.56142 -11.48248 -11.18569 -10.88082 -10.54941 -10.37788 -10.22446 -9.65533 -9.60536 -9.12524 -8.69758 -4.95664 0.29843 0.67124 0.73304 0.84240 1.22566 1.35607 1.45195 1.52921 1.57239 1.87281 1.99773 2.00565 3.11900 3.17324 3.23456 3.32776 3.42363 3.45741 3.53729 3.56755 3.63759 3.75066 3.83635 3.95794 4.12872 4.14635 4.15648 4.16395 4.26466 4.30110 4.45435 4.47405 4.53159 4.53609 4.58523 4.66059 4.67088 4.71003 4.77009 4.80135 4.85549 4.90908 4.97365 5.12841 5.19617 5.27466 5.39788 5.48380 5.79954 5.82483 5.86244 5.88551 6.27259 6.27856 6.51081 6.73333 7.05083 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.253 6.253 3 C -0.084 4.084 4 H 0.106 0.894 5 C -0.123 4.123 6 C -0.120 4.120 7 H 0.101 0.899 8 C 0.133 3.867 9 N -0.729 5.729 10 C 0.496 3.504 11 O -0.503 6.503 12 C 0.116 3.884 13 N -0.358 5.358 14 C 0.061 3.939 15 C -0.248 4.248 16 C -0.036 4.036 17 O -0.528 6.528 18 Si 0.686 3.314 19 C 0.134 3.866 20 C -0.021 4.021 21 C -0.099 4.099 22 C -0.125 4.125 23 C -0.112 4.112 24 C -0.127 4.127 25 C -0.091 4.091 26 N -0.249 5.249 27 C -0.100 4.100 28 H 0.076 0.924 29 H 0.101 0.899 30 H 0.077 0.923 31 H 0.098 0.902 32 H 0.073 0.927 33 H 0.074 0.926 34 H 0.072 0.928 35 H 0.402 0.598 36 H 0.128 0.872 37 H 0.119 0.881 38 H 0.178 0.822 39 H 0.116 0.884 40 H 0.375 0.625 41 H -0.256 1.256 42 H -0.261 1.261 43 H 0.153 0.847 44 H 0.124 0.876 45 H 0.122 0.878 46 H 0.124 0.876 47 H 0.123 0.877 48 H 0.083 0.917 49 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.784 5.485 -2.562 9.093 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.024 6.024 3 C -0.213 4.213 4 H 0.124 0.876 5 C -0.163 4.163 6 C -0.141 4.141 7 H 0.120 0.880 8 C 0.009 3.991 9 N -0.383 5.383 10 C 0.280 3.720 11 O -0.376 6.376 12 C -0.009 4.009 13 N -0.140 5.140 14 C -0.084 4.084 15 C -0.260 4.260 16 C -0.147 4.147 17 O -0.335 6.335 18 Si 0.587 3.413 19 C -0.032 4.032 20 C -0.023 4.023 21 C -0.118 4.118 22 C -0.143 4.143 23 C -0.130 4.130 24 C -0.145 4.145 25 C -0.111 4.111 26 N -0.070 5.070 27 C -0.140 4.140 28 H 0.095 0.905 29 H 0.120 0.880 30 H 0.096 0.904 31 H 0.116 0.884 32 H 0.092 0.908 33 H 0.092 0.908 34 H 0.090 0.910 35 H 0.236 0.764 36 H 0.146 0.854 37 H 0.137 0.863 38 H 0.195 0.805 39 H 0.134 0.866 40 H 0.223 0.777 41 H -0.180 1.180 42 H -0.186 1.186 43 H 0.171 0.829 44 H 0.142 0.858 45 H 0.140 0.860 46 H 0.142 0.858 47 H 0.141 0.859 48 H 0.101 0.899 49 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -5.921 3.688 -2.644 7.459 hybrid contribution -0.322 1.227 -0.928 1.572 sum -6.242 4.915 -3.572 8.711 Atomic orbital electron populations 1.23374 0.94104 1.06678 1.04923 1.87029 1.07582 1.10198 1.97611 1.24700 1.01014 0.94436 1.01178 0.87586 1.23450 0.98011 0.99128 0.95661 1.22756 0.95660 0.98989 0.96676 0.88048 1.21373 0.98134 0.88421 0.91166 1.45878 1.27782 1.30778 1.33826 1.20549 0.83565 0.86749 0.81171 1.90851 1.28327 1.49683 1.68705 1.21502 0.90273 0.99487 0.89653 1.47835 1.27316 1.10256 1.28553 1.22274 0.93475 0.93415 0.99235 1.20370 1.04499 0.97009 1.04075 1.24244 0.81773 1.05857 1.02777 1.86491 1.32330 1.87714 1.26948 0.95180 0.89613 0.75653 0.80830 1.20635 0.94405 0.92447 0.95687 1.17783 0.92926 0.97416 0.94179 1.21892 0.93182 0.98924 0.97807 1.21132 1.00111 0.97136 0.95921 1.21294 0.94534 0.97998 0.99224 1.21079 0.94721 1.00167 0.98520 1.21211 1.00067 0.95037 0.94737 1.77790 1.15540 1.09984 1.03642 1.22762 0.93432 0.97928 0.99856 0.90483 0.88029 0.90419 0.88401 0.90793 0.90791 0.91013 0.76426 0.85440 0.86341 0.80539 0.86595 0.77714 1.18013 1.18554 0.82944 0.85787 0.86017 0.85841 0.85898 0.89865 0.88603 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.17 10.76 101.05 1.09 1.26 16 2 S -0.25 -0.19 22.18 -107.50 -2.38 -2.57 16 3 C -0.08 0.15 4.29 -25.82 -0.11 0.04 16 4 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 5 C -0.12 0.35 7.23 -25.82 -0.19 0.16 16 6 C -0.12 0.43 3.76 -89.80 -0.34 0.09 16 7 H 0.10 -0.50 8.14 -51.93 -0.42 -0.92 16 8 C 0.13 -0.21 5.51 -4.04 -0.02 -0.23 16 9 N -0.73 1.95 5.56 -60.30 -0.33 1.62 16 10 C 0.50 0.27 7.86 -10.98 -0.09 0.18 16 11 O -0.50 -3.16 15.71 5.56 0.09 -3.08 16 12 C 0.12 -0.30 6.98 -5.19 -0.04 -0.33 16 13 N -0.36 -0.56 3.40 -62.58 -0.21 -0.78 16 14 C 0.06 0.00 9.96 -17.26 -0.17 -0.17 16 15 C -0.25 -0.45 5.34 -104.76 -0.56 -1.01 16 16 C -0.04 -0.01 2.00 36.00 0.07 0.06 16 17 O -0.53 -0.68 10.10 -35.23 -0.36 -1.04 16 18 Si 0.69 -0.98 30.81 -169.99 -5.24 -6.22 16 19 C 0.13 0.62 6.74 -82.78 -0.56 0.06 16 20 C -0.02 -0.10 5.80 -104.89 -0.61 -0.71 16 21 C -0.10 -0.40 8.94 -39.26 -0.35 -0.75 16 22 C -0.12 -0.37 10.03 -39.63 -0.40 -0.77 16 23 C -0.11 -0.28 10.04 -39.52 -0.40 -0.68 16 24 C -0.13 -0.36 10.03 -39.63 -0.40 -0.76 16 25 C -0.09 -0.37 9.75 -39.25 -0.38 -0.76 16 26 N -0.25 -1.31 11.64 33.43 0.39 -0.92 16 27 C -0.10 0.22 7.22 -25.92 -0.19 0.03 16 28 H 0.08 -0.16 8.14 -51.93 -0.42 -0.59 16 29 H 0.10 -0.17 8.14 -51.92 -0.42 -0.60 16 30 H 0.08 -0.16 8.14 -51.92 -0.42 -0.58 16 31 H 0.10 -0.14 7.85 -51.93 -0.41 -0.55 16 32 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 33 H 0.07 0.02 7.84 -51.93 -0.41 -0.38 16 34 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.40 -2.46 8.47 -40.82 -0.35 -2.80 16 36 H 0.13 -0.86 8.07 -51.93 -0.42 -1.27 16 37 H 0.12 -0.56 8.14 -51.93 -0.42 -0.98 16 38 H 0.18 -0.62 6.33 -52.49 -0.33 -0.95 16 39 H 0.12 0.06 7.84 -51.93 -0.41 -0.35 16 40 H 0.37 -0.44 8.70 45.56 0.40 -0.04 16 41 H -0.26 -0.51 7.11 56.52 0.40 -0.11 16 42 H -0.26 0.07 6.99 56.52 0.40 0.47 16 43 H 0.15 0.56 4.52 -52.49 -0.24 0.33 16 44 H 0.12 0.14 8.06 -52.49 -0.42 -0.28 16 45 H 0.12 0.05 8.06 -52.49 -0.42 -0.37 16 46 H 0.12 0.10 8.06 -52.49 -0.42 -0.32 16 47 H 0.12 0.45 8.06 -52.49 -0.42 0.02 16 48 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 49 H 0.10 -0.10 8.06 -51.93 -0.42 -0.52 16 LS Contribution 418.94 15.07 6.31 6.31 Total: 0.00 -11.57 418.94 -12.64 -24.21 By element: Atomic # 1 Polarization: -6.00 SS G_CDS: -7.28 Total: -13.28 kcal Atomic # 6 Polarization: -0.63 SS G_CDS: -3.63 Total: -4.26 kcal Atomic # 7 Polarization: 0.08 SS G_CDS: -0.16 Total: -0.08 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -0.27 Total: -4.11 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.24 Total: -6.22 kcal Atomic # 16 Polarization: -0.19 SS G_CDS: -2.38 Total: -2.57 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -11.57 -12.64 -24.21 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18360570_12622748.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.740 kcal (2) G-P(sol) polarization free energy of solvation -11.568 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 86.172 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.644 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.212 kcal (6) G-S(sol) free energy of system = (1) + (5) 73.528 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds