Wall clock time and date at job start Tue Mar 9 2021 12:58:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81394 * 1 3 3 C 1.81404 * 102.99741 * 2 1 4 4 H 1.08998 * 112.85317 * 43.80351 * 3 2 1 5 5 C 1.53785 * 113.61494 * 175.00283 * 3 2 1 6 6 C 1.53779 * 87.08084 * 140.06299 * 5 3 2 7 7 H 1.09005 * 113.61609 * 89.19873 * 6 5 3 8 8 C 1.53008 * 113.61460 * 220.01807 * 6 5 3 9 9 N 1.46493 * 109.47098 * 185.00037 * 8 6 5 10 10 C 1.34780 * 120.00121 * 179.97438 * 9 8 6 11 11 O 1.21517 * 119.99680 * 359.97438 * 10 9 8 12 12 C 1.48169 * 120.00175 * 180.02562 * 10 9 8 13 13 N 1.32713 * 119.72279 * 359.97305 * 12 10 9 14 14 C 1.31523 * 121.64208 * 179.72918 * 13 12 10 15 15 C 1.38565 * 120.89905 * 0.58356 * 14 13 12 16 16 C 1.50699 * 120.32080 * 179.70381 * 15 14 13 17 17 O 1.42903 * 109.47152 * 244.73034 * 16 15 14 18 18 Si 1.86305 * 109.47184 * 4.72506 * 16 15 14 19 19 C 1.38625 * 119.35223 * 359.43456 * 15 14 13 20 20 C 1.38582 * 118.48871 * 0.26877 * 19 15 14 21 21 C 1.53782 * 87.08275 * 334.56506 * 6 5 3 22 22 H 1.08999 * 109.47280 * 299.99886 * 1 2 3 23 23 H 1.08995 * 109.47548 * 60.00293 * 1 2 3 24 24 H 1.09001 * 109.46840 * 180.02562 * 1 2 3 25 25 H 1.09000 * 113.61436 * 25.51606 * 5 3 2 26 26 H 1.08997 * 113.61098 * 254.61140 * 5 3 2 27 27 H 1.08992 * 109.47097 * 64.99922 * 8 6 5 28 28 H 1.09003 * 109.46658 * 304.99937 * 8 6 5 29 29 H 0.97003 * 120.00560 * 0.02562 * 9 8 6 30 30 H 1.08001 * 119.55123 * 180.31826 * 14 13 12 31 31 H 1.08997 * 109.47198 * 124.72711 * 16 15 14 32 32 H 0.96700 * 114.00311 * 180.02562 * 17 16 15 33 33 H 1.48499 * 109.99670 * 178.68093 * 18 16 15 34 34 H 1.48497 * 110.00233 * 300.00062 * 18 16 15 35 35 H 1.08000 * 120.75203 * 180.29565 * 19 15 14 36 36 H 1.08005 * 120.47121 * 179.97438 * 20 19 15 37 37 H 1.09003 * 113.61609 * 139.98014 * 21 6 5 38 38 H 1.08995 * 113.61568 * 270.88157 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8139 0.0000 0.0000 3 6 2.2219 1.7676 0.0000 4 1 1.6108 2.3431 0.6952 5 6 3.7282 2.0521 0.1227 6 6 3.5200 3.1753 -0.9068 7 1 3.2651 4.1361 -0.4593 8 6 4.6470 3.2798 -1.9363 9 7 4.4188 4.4456 -2.7935 10 6 5.2903 4.7383 -3.7791 11 8 6.2656 4.0354 -3.9563 12 6 5.0598 5.9178 -4.6458 13 7 3.9932 6.6820 -4.4470 14 6 3.7546 7.7406 -5.1902 15 6 4.6088 8.0920 -6.2231 16 6 4.3193 9.3039 -7.0708 17 8 4.0583 8.8939 -8.4147 18 14 2.8298 10.1944 -6.3930 19 6 5.7351 7.3211 -6.4655 20 6 5.9643 6.2149 -5.6628 21 6 2.3002 2.3836 -1.4069 22 1 -0.3634 0.5138 0.8900 23 1 -0.3634 0.5137 -0.8899 24 1 -0.3633 -1.0277 0.0005 25 1 4.3572 1.2389 -0.2395 26 1 4.0257 2.4122 1.1076 27 1 4.6656 2.3775 -2.5475 28 1 5.6011 3.3891 -1.4207 29 1 3.6409 5.0074 -2.6514 30 1 2.8787 8.3417 -4.9955 31 1 5.1803 9.9721 -7.0555 32 1 3.8639 9.6242 -9.0180 33 1 2.5531 11.4091 -7.2013 34 1 1.6491 9.2941 -6.4086 35 1 6.4186 7.5770 -7.2616 36 1 6.8317 5.5918 -5.8236 37 1 1.4448 3.0112 -1.6569 38 1 2.5387 1.6611 -2.1873 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18360570_13287726.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:04 Heat of formation + Delta-G solvation = -1.464513 kcal Electronic energy + Delta-G solvation = -20550.729240 eV Core-core repulsion = 17293.973498 eV Total energy + Delta-G solvation = -3256.755742 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.103 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -41.80602 -40.54083 -39.57663 -38.04378 -35.55083 -33.92521 -32.99603 -30.08152 -29.62682 -27.57297 -26.81231 -25.01898 -24.44968 -23.25426 -21.76360 -20.74832 -19.22676 -18.78384 -18.15757 -17.54365 -16.88724 -16.87170 -16.57647 -16.27023 -16.07580 -15.60237 -15.29027 -15.13405 -14.93151 -14.55675 -14.30547 -14.15884 -14.12077 -14.04837 -13.95006 -13.57203 -13.49881 -12.83802 -12.59914 -12.15115 -11.98509 -11.85261 -11.45058 -11.28811 -11.05928 -10.83403 -10.76001 -10.56298 -10.29639 -10.00416 -8.62796 -5.13848 -0.53503 0.09386 0.74855 1.05622 1.42886 1.60001 1.67082 1.79141 2.04630 2.68381 2.94149 3.15362 3.31937 3.36345 3.53103 3.54239 3.67773 3.71812 3.75594 3.89082 4.07895 4.19145 4.19902 4.21791 4.22112 4.27279 4.55544 4.57175 4.64509 4.68441 4.75263 4.77300 4.84251 4.91948 4.96776 4.98888 5.25839 5.37467 5.44231 6.22588 6.35886 6.65940 7.17986 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.255 6.255 3 C -0.084 4.084 4 H 0.106 0.894 5 C -0.100 4.100 6 C -0.121 4.121 7 H 0.103 0.897 8 C 0.129 3.871 9 N -0.709 5.709 10 C 0.572 3.428 11 O -0.529 6.529 12 C 0.081 3.919 13 N -0.453 5.453 14 C 0.105 3.895 15 C -0.103 4.103 16 C -0.076 4.076 17 O -0.534 6.534 18 Si 0.683 3.317 19 C -0.052 4.052 20 C -0.108 4.108 21 C -0.123 4.123 22 H 0.076 0.924 23 H 0.077 0.923 24 H 0.100 0.900 25 H 0.096 0.904 26 H 0.083 0.917 27 H 0.075 0.925 28 H 0.075 0.925 29 H 0.412 0.588 30 H 0.164 0.836 31 H 0.084 0.916 32 H 0.384 0.616 33 H -0.255 1.255 34 H -0.250 1.250 35 H 0.146 0.854 36 H 0.153 0.847 37 H 0.074 0.926 38 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.129 5.642 1.275 6.164 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.026 6.026 3 C -0.212 4.212 4 H 0.124 0.876 5 C -0.139 4.139 6 C -0.141 4.141 7 H 0.121 0.879 8 C 0.005 3.995 9 N -0.361 5.361 10 C 0.356 3.644 11 O -0.405 6.405 12 C -0.058 4.058 13 N -0.164 5.164 14 C -0.054 4.054 15 C -0.105 4.105 16 C -0.186 4.186 17 O -0.342 6.342 18 Si 0.583 3.417 19 C -0.078 4.078 20 C -0.129 4.129 21 C -0.163 4.163 22 H 0.095 0.905 23 H 0.096 0.904 24 H 0.119 0.881 25 H 0.114 0.886 26 H 0.102 0.898 27 H 0.093 0.907 28 H 0.093 0.907 29 H 0.248 0.752 30 H 0.181 0.819 31 H 0.102 0.898 32 H 0.233 0.767 33 H -0.180 1.180 34 H -0.174 1.174 35 H 0.164 0.836 36 H 0.171 0.829 37 H 0.093 0.907 38 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -2.055 3.626 1.988 4.618 hybrid contribution -0.641 1.649 -1.852 2.561 sum -2.696 5.275 0.136 5.926 Atomic orbital electron populations 1.23367 0.94155 1.06600 1.04938 1.86979 1.07550 1.10453 1.97634 1.24681 1.01074 0.94224 1.01254 0.87586 1.22766 0.93347 0.97889 0.99897 1.22763 0.95647 0.99041 0.96651 0.87916 1.21444 0.98317 0.88389 0.91340 1.45802 1.27669 1.29930 1.32679 1.17836 0.82791 0.83516 0.80242 1.90824 1.28909 1.50270 1.70463 1.21163 0.92531 0.95738 0.96327 1.67530 1.17926 1.04309 1.26620 1.22591 0.98074 0.93236 0.91530 1.20520 0.95957 0.97252 0.96784 1.24731 1.09950 0.98184 0.85716 1.86585 1.92344 1.37294 1.18002 0.95071 0.77247 0.79151 0.90194 1.21534 0.96129 0.92651 0.97519 1.22209 1.00078 0.96991 0.93586 1.23419 0.98221 0.99098 0.95575 0.90498 0.90421 0.88096 0.88590 0.89834 0.90687 0.90702 0.75181 0.81907 0.89830 0.76716 1.18021 1.17423 0.83597 0.82919 0.90748 0.88433 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.10 10.76 101.05 1.09 1.19 16 2 S -0.25 -0.32 22.18 -107.50 -2.38 -2.70 16 3 C -0.08 0.08 4.27 -25.91 -0.11 -0.03 16 4 H 0.11 -0.18 8.14 -51.93 -0.42 -0.60 16 5 C -0.10 0.15 7.23 -25.92 -0.19 -0.03 16 6 C -0.12 0.26 3.75 -89.80 -0.34 -0.08 16 7 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 8 C 0.13 -0.03 5.51 -4.04 -0.02 -0.05 16 9 N -0.71 -0.43 5.54 -61.15 -0.34 -0.77 16 10 C 0.57 1.85 7.81 -12.18 -0.10 1.76 16 11 O -0.53 -3.29 16.32 5.35 0.09 -3.20 16 12 C 0.08 0.19 6.75 -83.01 -0.56 -0.37 16 13 N -0.45 -0.66 9.54 -9.80 -0.09 -0.75 16 14 C 0.11 0.01 9.84 -17.56 -0.17 -0.16 16 15 C -0.10 0.01 5.40 -104.36 -0.56 -0.56 16 16 C -0.08 0.14 2.81 36.01 0.10 0.24 16 17 O -0.53 0.25 12.82 -35.23 -0.45 -0.21 16 18 Si 0.68 -1.81 29.87 -169.99 -5.08 -6.89 16 19 C -0.05 -0.01 9.83 -39.31 -0.39 -0.40 16 20 C -0.11 -0.15 9.63 -39.06 -0.38 -0.53 16 21 C -0.12 0.19 7.22 -25.92 -0.19 0.00 16 22 H 0.08 -0.12 8.14 -51.92 -0.42 -0.54 16 23 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 24 H 0.10 -0.12 8.14 -51.92 -0.42 -0.55 16 25 H 0.10 -0.07 8.06 -51.93 -0.42 -0.49 16 26 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 27 H 0.07 0.06 7.84 -51.93 -0.41 -0.35 16 28 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 29 H 0.41 -0.35 7.80 -40.82 -0.32 -0.67 16 30 H 0.16 -0.35 4.88 -52.49 -0.26 -0.61 16 31 H 0.08 -0.31 7.96 -51.93 -0.41 -0.73 16 32 H 0.38 -1.69 8.74 45.56 0.40 -1.29 16 33 H -0.26 0.14 7.11 56.52 0.40 0.54 16 34 H -0.25 -0.08 7.06 56.52 0.40 0.31 16 35 H 0.15 -0.22 8.06 -52.49 -0.42 -0.65 16 36 H 0.15 0.14 7.64 -52.48 -0.40 -0.26 16 37 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 38 H 0.10 -0.04 7.86 -51.93 -0.41 -0.45 16 LS Contribution 335.25 15.07 5.05 5.05 Total: 0.00 -7.41 335.25 -10.25 -17.65 By element: Atomic # 1 Polarization: -3.94 SS G_CDS: -5.23 Total: -9.17 kcal Atomic # 6 Polarization: 2.79 SS G_CDS: -1.81 Total: 0.98 kcal Atomic # 7 Polarization: -1.08 SS G_CDS: -0.43 Total: -1.51 kcal Atomic # 8 Polarization: -3.05 SS G_CDS: -0.36 Total: -3.41 kcal Atomic # 14 Polarization: -1.81 SS G_CDS: -5.08 Total: -6.89 kcal Atomic # 16 Polarization: -0.32 SS G_CDS: -2.38 Total: -2.70 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -7.41 -10.25 -17.65 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18360570_13287726.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.190 kcal (2) G-P(sol) polarization free energy of solvation -7.407 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.783 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.247 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.654 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.465 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds