Wall clock time and date at job start Tue Mar 9 2021 12:58:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35986 * 117.00276 * 2 1 4 4 C 1.38555 * 120.06881 * 0.32819 * 3 2 1 5 5 C 1.38276 * 120.02074 * 180.24790 * 4 3 2 6 6 C 1.50703 * 119.92271 * 179.72126 * 5 4 3 7 7 O 1.42896 * 109.47055 * 299.72750 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 179.72642 * 6 5 4 9 9 C 1.38208 * 120.15614 * 359.44779 * 5 4 3 10 10 C 1.38387 * 120.12949 * 0.25434 * 9 5 4 11 11 Cl 1.73600 * 120.00746 * 180.02562 * 10 9 5 12 12 C 1.38617 * 119.97644 * 0.02562 * 10 9 5 13 13 O 1.36024 * 120.07221 * 180.02562 * 12 10 9 14 14 C 1.42901 * 116.99804 * 90.00746 * 13 12 10 15 15 C 1.53000 * 109.47401 * 89.99858 * 14 13 12 16 16 C 1.50705 * 109.47009 * 209.99729 * 14 13 12 17 17 O 1.21283 * 119.99909 * 0.02562 * 16 14 13 18 18 N 1.34777 * 120.00200 * 179.97438 * 16 14 13 19 19 C 1.46500 * 119.99756 * 180.02562 * 18 16 14 20 20 C 1.53004 * 109.46666 * 180.02562 * 19 18 16 21 21 H 1.08994 * 112.85066 * 43.80366 * 20 19 18 22 22 C 1.53779 * 113.61187 * 174.99981 * 20 19 18 23 23 C 1.53782 * 87.08025 * 139.98153 * 22 20 19 24 24 H 1.08995 * 113.61506 * 89.20105 * 23 22 20 25 25 S 1.81401 * 113.61459 * 220.01886 * 23 22 20 26 26 C 1.81400 * 103.00050 * 184.99842 * 25 23 22 27 27 C 1.53775 * 113.61497 * 272.49728 * 20 19 18 28 28 H 1.08993 * 109.47283 * 180.02562 * 1 2 3 29 29 H 1.09009 * 109.46381 * 299.99526 * 1 2 3 30 30 H 1.08996 * 109.47054 * 59.99311 * 1 2 3 31 31 H 1.08003 * 119.98956 * 359.96282 * 4 3 2 32 32 H 1.09002 * 109.47152 * 59.72558 * 6 5 4 33 33 H 0.96703 * 114.00193 * 180.02562 * 7 6 5 34 34 H 1.48495 * 110.00011 * 60.00027 * 8 6 5 35 35 H 1.48509 * 109.99497 * 181.32041 * 8 6 5 36 36 H 1.07994 * 119.93878 * 180.27121 * 9 5 4 37 37 H 1.08994 * 109.46964 * 329.99181 * 14 13 12 38 38 H 1.08994 * 109.46987 * 299.99871 * 15 14 13 39 39 H 1.08999 * 109.47164 * 59.99713 * 15 14 13 40 40 H 1.08997 * 109.46934 * 179.97438 * 15 14 13 41 41 H 0.97000 * 119.99705 * 0.02562 * 18 16 14 42 42 H 1.08999 * 109.47217 * 300.00239 * 19 18 16 43 43 H 1.08998 * 109.47290 * 60.00135 * 19 18 16 44 44 H 1.09004 * 113.61405 * 254.52914 * 22 20 19 45 45 H 1.08998 * 113.61562 * 25.43571 * 22 20 19 46 46 H 1.09003 * 109.46831 * 60.00166 * 26 25 23 47 47 H 1.08998 * 109.46966 * 179.97438 * 26 25 23 48 48 H 1.09000 * 109.47072 * 300.00243 * 26 25 23 49 49 H 1.09010 * 113.61565 * 334.56931 * 27 20 19 50 50 H 1.08999 * 113.61755 * 105.46847 * 27 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2933 2.3746 0.0069 5 6 1.9221 3.6061 0.0017 6 6 1.1007 4.8696 0.0028 7 8 0.2759 4.9025 -1.1636 8 14 2.2350 6.3475 0.0033 9 6 3.3022 3.6810 0.0012 10 6 4.0607 2.5235 0.0005 11 17 5.7939 2.6213 0.0005 12 6 3.4360 1.2861 -0.0001 13 8 4.1796 0.1471 -0.0002 14 6 4.5336 -0.3966 1.2730 15 6 3.4521 -1.3793 1.7265 16 6 5.8526 -1.1173 1.1623 17 8 6.4325 -1.1605 0.0980 18 7 6.3882 -1.7128 2.2462 19 6 7.6706 -2.4128 2.1387 20 6 8.0497 -2.9951 3.5019 21 1 7.2104 -3.4748 4.0053 22 6 9.3235 -3.8560 3.4713 23 6 9.6965 -3.2120 4.8171 24 1 9.3091 -3.7513 5.6814 25 16 11.4596 -2.8131 4.9679 26 6 11.6006 -2.2275 6.6790 27 6 8.8279 -2.0150 4.3955 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3632 0.5138 0.8901 30 1 -0.3633 0.5139 -0.8899 31 1 0.2147 2.3192 0.0116 32 1 0.4722 4.8936 0.8931 33 1 -0.2813 5.6901 -1.2292 34 1 3.0972 6.3265 -1.2055 35 1 1.4373 7.5998 0.0366 36 1 3.7896 4.6446 0.0015 37 1 4.6203 0.4099 2.0010 38 1 2.4982 -0.8581 1.8066 39 1 3.3655 -2.1858 0.9984 40 1 3.7225 -1.7943 2.6975 41 1 5.9246 -1.6779 3.0975 42 1 7.5844 -3.2194 1.4107 43 1 8.4408 -1.7125 1.8154 44 1 9.1288 -4.9264 3.5385 45 1 10.0050 -3.5988 2.6604 46 1 11.2904 -3.0195 7.3607 47 1 12.6356 -1.9553 6.8857 48 1 10.9605 -1.3564 6.8187 49 1 9.3740 -1.2544 3.8372 50 1 8.2332 -1.5991 5.2087 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18360570_13428712.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:27 Heat of formation + Delta-G solvation = -83.248028 kcal Electronic energy + Delta-G solvation = -33533.597269 eV Core-core repulsion = 28874.944006 eV Total energy + Delta-G solvation = -4658.653264 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.115 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -41.97204 -41.04056 -39.91156 -39.20960 -38.90046 -37.81431 -37.06069 -35.63281 -33.30567 -31.61274 -31.35712 -29.89971 -29.19645 -28.53954 -26.71895 -26.67509 -25.47675 -23.90691 -23.57421 -22.63006 -21.68063 -20.53206 -19.64190 -18.74389 -18.71478 -18.40152 -18.01042 -17.39731 -17.18419 -16.83392 -16.68387 -16.63817 -16.24293 -15.96200 -15.92667 -15.57799 -15.37533 -15.14251 -14.91805 -14.59838 -14.52574 -14.28261 -14.10415 -14.02825 -13.96970 -13.83615 -13.49945 -13.44801 -13.36625 -13.18955 -12.92735 -12.85862 -12.78798 -12.58421 -12.41874 -12.17328 -11.97102 -11.88323 -11.77951 -11.76573 -11.34970 -11.34033 -10.81800 -10.68010 -10.58015 -10.15907 -9.83993 -9.40317 -8.70605 -4.95971 -0.33431 -0.02598 0.78736 0.84682 1.22535 1.50138 1.56810 1.64908 1.69070 1.93808 2.16760 2.22111 2.68809 3.21823 3.38789 3.45030 3.58507 3.61325 3.69951 3.74876 3.80626 3.84540 3.85034 4.00476 4.03895 4.07932 4.17824 4.28444 4.31691 4.32640 4.35986 4.37321 4.42756 4.60949 4.62802 4.71404 4.73672 4.75315 4.77024 4.77741 4.83625 4.84342 4.86962 4.98154 5.04967 5.10276 5.19572 5.24201 5.30333 5.46601 5.93217 6.33237 6.50658 6.56126 7.17322 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.311 6.311 3 C 0.127 3.873 4 C -0.163 4.163 5 C -0.026 4.026 6 C -0.075 4.075 7 O -0.554 6.554 8 Si 0.745 3.255 9 C -0.137 4.137 10 C -0.024 4.024 11 Cl -0.049 7.049 12 C 0.054 3.946 13 O -0.310 6.310 14 C 0.073 3.927 15 C -0.161 4.161 16 C 0.513 3.487 17 O -0.565 6.565 18 N -0.708 5.708 19 C 0.134 3.866 20 C -0.102 4.102 21 H 0.128 0.872 22 C -0.105 4.105 23 C -0.071 4.071 24 H 0.121 0.879 25 S -0.323 6.323 26 C -0.109 4.109 27 C -0.118 4.118 28 H 0.119 0.881 29 H 0.077 0.923 30 H 0.060 0.940 31 H 0.163 0.837 32 H 0.117 0.883 33 H 0.400 0.600 34 H -0.304 1.304 35 H -0.276 1.276 36 H 0.153 0.847 37 H 0.106 0.894 38 H 0.081 0.919 39 H 0.057 0.943 40 H 0.102 0.898 41 H 0.418 0.582 42 H 0.061 0.939 43 H 0.054 0.946 44 H 0.092 0.908 45 H 0.079 0.921 46 H 0.086 0.914 47 H 0.101 0.899 48 H 0.086 0.914 49 H 0.081 0.919 50 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.976 1.117 11.372 13.935 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.224 6.224 3 C 0.080 3.920 4 C -0.182 4.182 5 C -0.027 4.027 6 C -0.185 4.185 7 O -0.365 6.365 8 Si 0.651 3.349 9 C -0.155 4.155 10 C -0.051 4.051 11 Cl -0.020 7.020 12 C 0.008 3.992 13 O -0.226 6.226 14 C 0.014 3.986 15 C -0.218 4.218 16 C 0.299 3.701 17 O -0.443 6.443 18 N -0.362 5.362 19 C 0.010 3.990 20 C -0.122 4.122 21 H 0.146 0.854 22 C -0.145 4.145 23 C -0.200 4.200 24 H 0.139 0.861 25 S -0.095 6.095 26 C -0.277 4.277 27 C -0.158 4.158 28 H 0.137 0.863 29 H 0.096 0.904 30 H 0.079 0.921 31 H 0.180 0.820 32 H 0.134 0.866 33 H 0.251 0.749 34 H -0.232 1.232 35 H -0.202 1.202 36 H 0.170 0.830 37 H 0.123 0.877 38 H 0.100 0.900 39 H 0.076 0.924 40 H 0.121 0.879 41 H 0.256 0.744 42 H 0.079 0.921 43 H 0.072 0.928 44 H 0.110 0.890 45 H 0.097 0.903 46 H 0.105 0.895 47 H 0.120 0.880 48 H 0.105 0.895 49 H 0.099 0.901 50 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -5.866 0.847 9.226 10.966 hybrid contribution -1.653 0.519 0.222 1.746 sum -7.519 1.365 9.448 12.152 Atomic orbital electron populations 1.23465 0.76023 1.05941 1.02671 1.86211 1.23481 1.24995 1.87733 1.19181 0.90413 0.86164 0.96229 1.21307 1.01735 0.90039 1.05092 1.19206 0.91974 0.94685 0.96819 1.24828 0.99698 1.02219 0.91718 1.86536 1.58266 1.48191 1.43518 0.94287 0.79653 0.74048 0.86952 1.20821 0.93087 0.97207 1.04432 1.21037 0.85949 0.93621 1.04496 1.98412 1.08476 1.98468 1.96619 1.17764 0.87368 0.85341 1.08706 1.86251 1.69910 1.38038 1.28373 1.22363 0.92858 0.97601 0.85763 1.22255 0.98162 0.98821 1.02557 1.20619 0.86456 0.78954 0.84058 1.90745 1.63300 1.60456 1.29800 1.45713 1.23258 1.55163 1.12115 1.21319 0.84308 0.95635 0.97714 1.22683 0.97849 0.97424 0.94240 0.85449 1.22794 0.96118 1.00591 0.94948 1.24745 0.91062 1.01870 1.02300 0.86120 1.87268 1.15735 1.85913 1.20582 1.23363 1.06833 1.04365 0.93162 1.23356 0.97055 0.95505 0.99877 0.86250 0.90416 0.92108 0.81967 0.86562 0.74886 1.23151 1.20220 0.82977 0.87654 0.90002 0.92424 0.87903 0.74400 0.92112 0.92764 0.88972 0.90257 0.89540 0.88029 0.89541 0.90060 0.88948 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.07 9.81 113.37 1.11 1.04 16 2 O -0.31 -0.73 8.18 -79.52 -0.65 -1.38 16 3 C 0.13 0.51 6.54 22.56 0.15 0.66 16 4 C -0.16 -0.07 8.60 22.35 0.19 0.13 16 5 C -0.03 -0.02 5.42 -19.86 -0.11 -0.12 16 6 C -0.08 0.29 2.81 71.24 0.20 0.49 16 7 O -0.55 0.73 12.75 -148.98 -1.90 -1.17 16 8 Si 0.75 -2.30 29.78 68.60 2.04 -0.25 16 9 C -0.14 -0.38 8.45 22.30 0.19 -0.19 16 10 C -0.02 -0.16 6.33 22.40 0.14 -0.02 16 11 Cl -0.05 -0.42 28.50 -2.72 -0.08 -0.50 16 12 C 0.05 0.42 5.56 22.58 0.13 0.54 16 13 O -0.31 -3.40 8.48 -67.41 -0.57 -3.97 16 14 C 0.07 0.25 3.20 29.85 0.10 0.35 16 15 C -0.16 0.34 8.99 71.98 0.65 0.98 16 16 C 0.51 3.58 7.23 87.66 0.63 4.21 16 17 O -0.57 -10.21 16.50 16.00 0.26 -9.95 16 18 N -0.71 1.10 5.45 -463.05 -2.52 -1.42 16 19 C 0.13 -0.06 5.51 86.38 0.48 0.42 16 20 C -0.10 0.65 3.75 -10.27 -0.04 0.62 16 21 H 0.13 -1.39 8.14 -2.39 -0.02 -1.41 16 22 C -0.11 0.35 7.23 31.12 0.23 0.58 16 23 C -0.07 0.24 4.28 31.12 0.13 0.37 16 24 H 0.12 -0.73 8.14 -2.39 -0.02 -0.75 16 25 S -0.32 -0.91 22.17 -56.49 -1.25 -2.16 16 26 C -0.11 0.30 10.76 113.37 1.22 1.52 16 27 C -0.12 0.63 7.22 31.12 0.22 0.85 16 28 H 0.12 -1.02 8.14 -2.39 -0.02 -1.04 16 29 H 0.08 -0.73 7.65 -2.38 -0.02 -0.75 16 30 H 0.06 -0.34 7.68 -2.39 -0.02 -0.35 16 31 H 0.16 -0.65 6.30 -2.91 -0.02 -0.67 16 32 H 0.12 -1.16 7.96 -2.39 -0.02 -1.18 16 33 H 0.40 -3.76 8.74 -74.05 -0.65 -4.41 16 34 H -0.30 -1.81 7.11 99.48 0.71 -1.11 16 35 H -0.28 -0.04 7.11 99.48 0.71 0.66 16 36 H 0.15 -0.03 4.86 -2.91 -0.01 -0.05 16 37 H 0.11 -0.08 7.91 -2.39 -0.02 -0.10 16 38 H 0.08 -0.19 6.28 -2.39 -0.02 -0.20 16 39 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 40 H 0.10 -0.93 7.56 -2.39 -0.02 -0.95 16 41 H 0.42 -3.85 7.89 -92.71 -0.73 -4.58 16 42 H 0.06 0.16 8.14 -2.39 -0.02 0.14 16 43 H 0.05 0.21 7.84 -2.39 -0.02 0.19 16 44 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 45 H 0.08 0.03 8.06 -2.39 -0.02 0.01 16 46 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 47 H 0.10 -0.30 8.14 -2.39 -0.02 -0.32 16 48 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 49 H 0.08 -0.10 7.86 -2.38 -0.02 -0.12 16 50 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 Total: 0.00 -27.99 435.73 0.59 -27.40 By element: Atomic # 1 Polarization: -18.68 SS G_CDS: -0.36 Total: -19.03 kcal Atomic # 6 Polarization: 6.81 SS G_CDS: 5.62 Total: 12.42 kcal Atomic # 7 Polarization: 1.10 SS G_CDS: -2.52 Total: -1.42 kcal Atomic # 8 Polarization: -13.60 SS G_CDS: -2.86 Total: -16.45 kcal Atomic # 14 Polarization: -2.30 SS G_CDS: 2.04 Total: -0.25 kcal Atomic # 16 Polarization: -0.91 SS G_CDS: -1.25 Total: -2.16 kcal Atomic # 17 Polarization: -0.42 SS G_CDS: -0.08 Total: -0.50 kcal Total: -27.99 0.59 -27.40 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18360570_13428712.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.851 kcal (2) G-P(sol) polarization free energy of solvation -27.991 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.842 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.594 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.397 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.248 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds