Wall clock time and date at job start Tue Mar 9 2021 12:58:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81402 * 1 3 3 C 1.81405 * 103.00083 * 2 1 4 4 H 1.08998 * 112.84909 * 43.80542 * 3 2 1 5 5 C 1.53783 * 113.61097 * 174.99753 * 3 2 1 6 6 C 1.53779 * 87.07658 * 139.98088 * 5 3 2 7 7 H 1.09005 * 113.61642 * 89.20117 * 6 5 3 8 8 C 1.53004 * 113.61572 * 220.01741 * 6 5 3 9 9 N 1.46504 * 109.47285 * 183.47170 * 8 6 5 10 10 C 1.34770 * 119.99723 * 180.02562 * 9 8 6 11 11 O 1.21613 * 120.00662 * 359.97438 * 10 9 8 12 12 C 1.47385 * 119.99488 * 180.02562 * 10 9 8 13 13 C 1.36411 * 127.19467 * 359.97438 * 12 10 9 14 14 O 1.33651 * 108.39754 * 180.02562 * 13 12 10 15 15 C 1.34214 * 110.90899 * 359.97438 * 14 13 12 16 16 C 1.50699 * 125.43765 * 179.97438 * 15 14 13 17 17 O 1.42903 * 109.47152 * 120.03099 * 16 15 14 18 18 Si 1.86293 * 109.47431 * 0.02991 * 16 15 14 19 19 C 1.34183 * 109.12463 * 0.23207 * 15 14 13 20 20 C 1.53775 * 87.17518 * 334.61063 * 6 5 3 21 21 H 1.08995 * 109.47162 * 180.02562 * 1 2 3 22 22 H 1.09003 * 109.46943 * 300.00240 * 1 2 3 23 23 H 1.09001 * 109.46890 * 59.99945 * 1 2 3 24 24 H 1.08999 * 113.61788 * 25.43785 * 5 3 2 25 25 H 1.08997 * 113.68961 * 254.54066 * 5 3 2 26 26 H 1.09000 * 109.46799 * 63.46991 * 8 6 5 27 27 H 1.09002 * 109.47051 * 303.47583 * 8 6 5 28 28 H 0.97002 * 119.99874 * 0.02562 * 9 8 6 29 29 H 1.07996 * 125.80225 * 0.05472 * 13 12 10 30 30 H 1.09008 * 109.47393 * 240.02494 * 16 15 14 31 31 H 0.96700 * 114.00311 * 180.02562 * 17 16 15 32 32 H 1.48501 * 109.99918 * 298.67862 * 18 16 15 33 33 H 1.48506 * 109.99973 * 59.99460 * 18 16 15 34 34 H 1.07997 * 127.02335 * 179.73313 * 19 15 14 35 35 H 1.09001 * 113.61971 * 139.94394 * 20 6 5 36 36 H 1.09001 * 113.61362 * 270.83670 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7675 0.0000 4 1 1.6110 2.3430 0.6953 5 6 3.7284 2.0519 0.1229 6 6 3.5207 3.1737 -0.9083 7 1 3.2659 4.1351 -0.4623 8 6 4.6480 3.2765 -1.9377 9 7 4.4012 4.4198 -2.8198 10 6 5.2691 4.7064 -3.8102 11 8 6.2574 4.0164 -3.9714 12 6 5.0210 5.8570 -4.6972 13 6 3.9683 6.7233 -4.6493 14 8 4.1172 7.6225 -5.6268 15 6 5.2369 7.3866 -6.3282 16 6 5.7206 8.1994 -7.5014 17 8 7.0094 8.7416 -7.2062 18 14 4.5233 9.5880 -7.8308 19 6 5.8539 6.3080 -5.8217 20 6 2.2998 2.3838 -1.4086 21 1 -0.3633 -1.0276 0.0005 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5139 -0.8900 24 1 4.3573 1.2381 -0.2381 25 1 4.0270 2.4132 1.1069 26 1 4.6840 2.3619 -2.5296 27 1 5.5989 3.4135 -1.4226 28 1 3.6131 4.9705 -2.6910 29 1 3.1534 6.6888 -3.9415 30 1 5.7882 7.5612 -8.3825 31 1 7.3831 9.2781 -7.9187 32 1 3.1869 9.0366 -8.1704 33 1 4.4222 10.4655 -6.6369 34 1 6.7747 5.8629 -6.1685 35 1 1.4454 3.0127 -1.6588 36 1 2.5374 1.6609 -2.1890 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18360570_13456056.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:32 Heat of formation + Delta-G solvation = -21.462755 kcal Electronic energy + Delta-G solvation = -19436.264879 eV Core-core repulsion = 16209.149427 eV Total energy + Delta-G solvation = -3227.115452 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 284.091 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -43.74638 -40.79426 -39.65089 -37.98437 -35.52684 -33.96800 -32.09753 -30.05347 -29.43723 -26.90816 -26.65882 -25.19884 -23.55273 -22.21857 -21.27641 -20.37603 -19.07822 -18.71523 -17.75917 -17.27249 -17.19422 -16.86613 -16.65870 -16.07205 -15.94510 -15.80121 -15.27181 -14.80735 -14.69587 -14.27007 -14.20479 -14.15826 -14.11981 -13.71850 -13.63897 -13.56221 -12.91396 -12.72412 -12.11136 -12.05341 -11.89939 -11.52994 -11.03865 -10.88525 -10.84473 -10.58449 -10.14209 -9.78703 -8.67989 -5.14627 0.20299 0.69231 0.87090 1.09985 1.51155 1.54677 1.63431 1.95559 2.03815 2.36208 3.18315 3.25286 3.29238 3.46439 3.50940 3.58762 3.60442 3.84533 3.99353 4.14099 4.16889 4.17456 4.18715 4.36683 4.50479 4.57553 4.58705 4.61991 4.69750 4.72337 4.75815 4.84006 4.90156 5.17963 5.22082 5.36364 5.82171 6.40679 6.43274 7.19776 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.253 6.253 3 C -0.084 4.084 4 H 0.106 0.894 5 C -0.100 4.100 6 C -0.122 4.122 7 H 0.101 0.899 8 C 0.132 3.868 9 N -0.727 5.727 10 C 0.588 3.412 11 O -0.529 6.529 12 C -0.234 4.234 13 C 0.029 3.971 14 O -0.174 6.174 15 C -0.017 4.017 16 C -0.036 4.036 17 O -0.543 6.543 18 Si 0.712 3.288 19 C -0.117 4.117 20 C -0.124 4.124 21 H 0.101 0.899 22 H 0.076 0.924 23 H 0.077 0.923 24 H 0.096 0.904 25 H 0.083 0.917 26 H 0.075 0.925 27 H 0.074 0.926 28 H 0.398 0.602 29 H 0.214 0.786 30 H 0.095 0.905 31 H 0.391 0.609 32 H -0.252 1.252 33 H -0.250 1.250 34 H 0.164 0.836 35 H 0.073 0.927 36 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.969 4.104 -1.828 5.995 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.025 6.025 3 C -0.213 4.213 4 H 0.124 0.876 5 C -0.139 4.139 6 C -0.142 4.142 7 H 0.119 0.881 8 C 0.008 3.992 9 N -0.379 5.379 10 C 0.375 3.625 11 O -0.406 6.406 12 C -0.239 4.239 13 C -0.041 4.041 14 O -0.070 6.070 15 C -0.064 4.064 16 C -0.146 4.146 17 O -0.350 6.350 18 Si 0.612 3.388 19 C -0.136 4.136 20 C -0.163 4.163 21 H 0.120 0.880 22 H 0.095 0.905 23 H 0.096 0.904 24 H 0.115 0.885 25 H 0.102 0.898 26 H 0.093 0.907 27 H 0.092 0.908 28 H 0.232 0.768 29 H 0.230 0.770 30 H 0.113 0.887 31 H 0.241 0.759 32 H -0.177 1.177 33 H -0.174 1.174 34 H 0.182 0.818 35 H 0.091 0.909 36 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -3.625 2.969 -1.184 4.833 hybrid contribution -1.171 0.536 0.565 1.406 sum -4.796 3.505 -0.619 5.973 Atomic orbital electron populations 1.23373 0.94145 1.06652 1.04912 1.87011 1.07540 1.10284 1.97617 1.24702 1.01063 0.94360 1.01135 0.87609 1.22755 0.93366 0.97892 0.99881 1.22767 0.95683 0.99009 0.96734 0.88095 1.21393 0.98151 0.88885 0.90746 1.45793 1.26830 1.32395 1.32905 1.17221 0.82664 0.83040 0.79563 1.90828 1.27935 1.50687 1.71125 1.21533 0.99086 1.00882 1.02362 1.24449 0.99643 0.88973 0.91066 1.83692 1.39166 1.47473 1.36706 1.21164 0.88261 0.98809 0.98198 1.23800 0.93503 1.04251 0.93007 1.86465 1.31444 1.71119 1.46004 0.95117 0.77724 0.80013 0.85991 1.22507 1.00561 0.95686 0.94893 1.23448 0.98035 0.99160 0.95687 0.88041 0.90497 0.90441 0.88536 0.89806 0.90694 0.90778 0.76839 0.76998 0.88684 0.75938 1.17692 1.17415 0.81795 0.90856 0.88360 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.14 10.76 101.05 1.09 1.23 16 2 S -0.25 -0.25 22.18 -107.50 -2.38 -2.63 16 3 C -0.08 0.12 4.28 -25.83 -0.11 0.00 16 4 H 0.11 -0.22 8.14 -51.93 -0.42 -0.64 16 5 C -0.10 0.17 7.23 -25.92 -0.19 -0.01 16 6 C -0.12 0.33 3.75 -89.81 -0.34 -0.01 16 7 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 8 C 0.13 -0.07 5.50 -4.04 -0.02 -0.09 16 9 N -0.73 0.28 5.55 -61.39 -0.34 -0.06 16 10 C 0.59 2.05 7.81 -12.54 -0.10 1.95 16 11 O -0.53 -4.09 16.98 5.27 0.09 -4.00 16 12 C -0.23 -0.61 6.31 -103.27 -0.65 -1.26 16 13 C 0.03 0.00 11.61 30.07 0.35 0.35 16 14 O -0.17 -0.40 8.89 7.66 0.07 -0.33 16 15 C -0.02 -0.04 6.24 -35.74 -0.22 -0.27 16 16 C -0.04 0.02 2.96 36.01 0.11 0.13 16 17 O -0.54 0.19 12.84 -35.23 -0.45 -0.26 16 18 Si 0.71 -1.12 32.08 -169.99 -5.45 -6.57 16 19 C -0.12 -0.41 10.88 -37.45 -0.41 -0.82 16 20 C -0.12 0.28 7.24 -25.83 -0.19 0.09 16 21 H 0.10 -0.15 8.14 -51.93 -0.42 -0.57 16 22 H 0.08 -0.14 8.14 -51.92 -0.42 -0.56 16 23 H 0.08 -0.14 8.14 -51.92 -0.42 -0.56 16 24 H 0.10 -0.08 8.06 -51.93 -0.42 -0.50 16 25 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 26 H 0.07 0.06 7.87 -51.93 -0.41 -0.35 16 27 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 28 H 0.40 -1.42 7.44 -40.82 -0.30 -1.73 16 29 H 0.21 -1.04 7.47 -52.49 -0.39 -1.43 16 30 H 0.10 -0.26 7.96 -51.92 -0.41 -0.68 16 31 H 0.39 -2.32 8.74 45.56 0.40 -1.92 16 32 H -0.25 -0.30 7.11 56.52 0.40 0.11 16 33 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 34 H 0.16 0.57 8.06 -52.49 -0.42 0.15 16 35 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 36 H 0.10 -0.10 7.88 -51.93 -0.41 -0.51 16 LS Contribution 325.93 15.07 4.91 4.91 Total: 0.00 -10.26 325.93 -9.19 -19.46 By element: Atomic # 1 Polarization: -6.86 SS G_CDS: -4.95 Total: -11.81 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: -0.68 Total: 1.29 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -0.34 Total: -0.06 kcal Atomic # 8 Polarization: -4.30 SS G_CDS: -0.29 Total: -4.59 kcal Atomic # 14 Polarization: -1.12 SS G_CDS: -5.45 Total: -6.57 kcal Atomic # 16 Polarization: -0.25 SS G_CDS: -2.38 Total: -2.63 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -10.26 -9.19 -19.46 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18360570_13456056.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.006 kcal (2) G-P(sol) polarization free energy of solvation -10.264 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -12.270 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.193 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.457 kcal (6) G-S(sol) free energy of system = (1) + (5) -21.463 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds