Wall clock time and date at job start Tue Mar 9 2021 12:58:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81403 * 1 3 3 C 1.81393 * 103.00152 * 2 1 4 4 H 1.09003 * 112.85169 * 316.19934 * 3 2 1 5 5 C 1.53957 * 113.74325 * 87.40404 * 3 2 1 6 6 C 1.53782 * 87.02124 * 139.94377 * 5 3 2 7 7 H 1.09000 * 113.61140 * 89.22834 * 6 5 3 8 8 C 1.52995 * 113.61652 * 220.04574 * 6 5 3 9 9 N 1.46501 * 109.47428 * 274.13840 * 8 6 5 10 10 C 1.34775 * 119.99896 * 179.97438 * 9 8 6 11 11 O 1.21277 * 120.00139 * 0.02562 * 10 9 8 12 12 C 1.50704 * 120.00018 * 179.97438 * 10 9 8 13 13 C 1.50696 * 109.47178 * 180.02562 * 12 10 9 14 14 C 1.34852 * 125.88991 * 274.96040 * 13 12 10 15 15 C 1.40897 * 107.41174 * 179.80838 * 14 13 12 16 16 C 1.34849 * 107.42061 * 0.37848 * 15 14 13 17 17 C 1.50699 * 125.89093 * 179.88782 * 16 15 14 18 18 O 1.42901 * 109.46830 * 119.68856 * 17 16 15 19 19 Si 1.86298 * 109.46950 * 359.69293 * 17 16 15 20 20 N 1.36340 * 125.88900 * 95.00278 * 13 12 10 21 21 C 1.53781 * 113.61708 * 185.00287 * 3 2 1 22 22 H 1.09005 * 109.46986 * 299.99750 * 1 2 3 23 23 H 1.09000 * 109.47068 * 59.99596 * 1 2 3 24 24 H 1.08998 * 109.47375 * 179.97438 * 1 2 3 25 25 H 1.08998 * 113.61627 * 25.42329 * 5 3 2 26 26 H 1.09004 * 113.66530 * 254.47072 * 5 3 2 27 27 H 1.09003 * 109.47232 * 154.13665 * 8 6 5 28 28 H 1.09004 * 109.46968 * 34.13693 * 8 6 5 29 29 H 0.96998 * 119.99426 * 359.97438 * 9 8 6 30 30 H 1.09003 * 109.46755 * 60.00321 * 12 10 9 31 31 H 1.09004 * 109.47106 * 300.00557 * 12 10 9 32 32 H 1.07997 * 126.29295 * 0.02562 * 14 13 12 33 33 H 1.07998 * 126.28655 * 180.24347 * 15 14 13 34 34 H 1.08991 * 109.47351 * 239.69003 * 17 16 15 35 35 H 0.96708 * 114.00246 * 299.99864 * 18 17 16 36 36 H 1.48506 * 109.99834 * 180.02562 * 19 17 16 37 37 H 1.48502 * 110.00011 * 301.31529 * 19 17 16 38 38 H 0.97000 * 125.63551 * 359.94123 * 20 13 12 39 39 H 1.08996 * 113.61881 * 105.38844 * 21 3 2 40 40 H 1.09008 * 113.68952 * 334.49280 * 21 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7674 0.0000 4 1 1.6110 2.3430 -0.6953 5 6 2.2994 2.3858 1.4078 6 6 3.5203 3.1751 0.9067 7 1 3.2654 4.1358 0.4592 8 6 4.6473 3.2796 1.9361 9 7 4.4001 4.4241 2.8165 10 6 5.2677 4.7123 3.8068 11 8 6.2533 4.0245 3.9687 12 6 5.0138 5.8900 4.7121 13 6 6.1238 5.9928 5.7261 14 6 6.1878 5.3289 6.8981 15 6 7.3862 5.7100 7.5336 16 6 8.0047 6.5985 6.7296 17 6 9.3213 7.2761 7.0095 18 8 10.2574 6.9402 5.9834 19 14 9.9754 6.7052 8.6579 20 7 7.2362 6.7735 5.6171 21 6 3.7284 2.0519 -0.1229 22 1 -0.3633 0.5138 0.8901 23 1 -0.3633 0.5139 -0.8899 24 1 -0.3634 -1.0276 -0.0005 25 1 2.5368 1.6640 2.1893 26 1 1.4448 3.0150 1.6568 27 1 5.5983 3.4160 1.4212 28 1 4.6832 2.3659 2.5295 29 1 3.6120 4.9745 2.6867 30 1 4.0625 5.7542 5.2267 31 1 4.9785 6.8036 4.1186 32 1 5.4568 4.6305 7.2780 33 1 7.7427 5.3570 8.4900 34 1 9.1769 8.3562 7.0303 35 1 10.4347 5.9926 5.9074 36 1 11.2734 7.3668 8.9459 37 1 8.9967 7.0201 9.7294 38 1 7.4463 7.3569 4.8712 39 1 4.0259 2.4120 -1.1077 40 1 4.3585 1.2393 0.2389 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18360570_14644196.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:36 Heat of formation + Delta-G solvation = -1.538095 kcal Electronic energy + Delta-G solvation = -21012.539745 eV Core-core repulsion = 17728.469334 eV Total energy + Delta-G solvation = -3284.070411 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.119 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -42.26353 -40.79545 -39.70277 -37.63326 -35.45755 -33.18677 -31.83500 -30.25677 -29.86504 -28.62911 -26.89196 -25.24401 -23.98894 -21.91160 -21.27541 -21.08373 -20.58165 -18.92955 -18.25691 -17.62220 -17.04034 -16.93276 -16.50632 -16.36708 -16.10149 -15.34022 -15.33974 -14.89123 -14.85289 -14.53896 -14.41557 -14.19889 -14.05926 -13.98140 -13.80156 -13.63835 -13.58806 -13.50972 -12.93551 -12.69378 -12.04387 -11.98348 -11.89019 -11.86144 -11.51866 -10.91086 -10.79883 -10.58000 -10.09747 -9.69094 -8.87169 -8.67678 -4.92257 0.69669 1.17196 1.33187 1.55113 1.66183 1.72578 1.95680 1.98194 2.31061 2.52756 3.25606 3.29074 3.47411 3.49721 3.61267 3.65740 3.86615 3.92027 4.01115 4.07732 4.14652 4.17402 4.19611 4.36009 4.45157 4.50651 4.57889 4.61436 4.62411 4.70553 4.73507 4.82808 4.84614 4.90942 5.19502 5.34339 5.37938 5.39591 6.07977 6.22425 6.42717 6.57458 6.68802 7.23244 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.253 6.253 3 C -0.084 4.084 4 H 0.105 0.895 5 C -0.123 4.123 6 C -0.121 4.121 7 H 0.100 0.900 8 C 0.131 3.869 9 N -0.732 5.732 10 C 0.510 3.490 11 O -0.522 6.522 12 C -0.072 4.072 13 C 0.035 3.965 14 C -0.173 4.173 15 C -0.188 4.188 16 C -0.011 4.011 17 C -0.049 4.049 18 O -0.547 6.547 19 Si 0.720 3.280 20 N -0.535 5.535 21 C -0.100 4.100 22 H 0.077 0.923 23 H 0.076 0.924 24 H 0.101 0.899 25 H 0.098 0.902 26 H 0.073 0.927 27 H 0.070 0.930 28 H 0.073 0.927 29 H 0.400 0.600 30 H 0.117 0.883 31 H 0.098 0.902 32 H 0.136 0.864 33 H 0.141 0.859 34 H 0.109 0.891 35 H 0.383 0.617 36 H -0.256 1.256 37 H -0.255 1.255 38 H 0.412 0.588 39 H 0.082 0.918 40 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.785 1.259 -1.659 5.218 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.025 6.025 3 C -0.213 4.213 4 H 0.123 0.877 5 C -0.162 4.162 6 C -0.141 4.141 7 H 0.118 0.882 8 C 0.007 3.993 9 N -0.386 5.386 10 C 0.295 3.705 11 O -0.396 6.396 12 C -0.113 4.113 13 C -0.078 4.078 14 C -0.198 4.198 15 C -0.213 4.213 16 C -0.124 4.124 17 C -0.160 4.160 18 O -0.353 6.353 19 Si 0.620 3.380 20 N -0.130 5.130 21 C -0.140 4.140 22 H 0.096 0.904 23 H 0.095 0.905 24 H 0.120 0.880 25 H 0.116 0.884 26 H 0.092 0.908 27 H 0.088 0.912 28 H 0.091 0.909 29 H 0.234 0.766 30 H 0.135 0.865 31 H 0.117 0.883 32 H 0.154 0.846 33 H 0.159 0.841 34 H 0.127 0.873 35 H 0.231 0.769 36 H -0.181 1.181 37 H -0.179 1.179 38 H 0.249 0.751 39 H 0.101 0.899 40 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -3.125 0.805 -0.956 3.366 hybrid contribution -1.780 1.924 -1.018 2.812 sum -4.905 2.730 -1.974 5.950 Atomic orbital electron populations 1.23373 0.94133 1.06652 1.04919 1.87007 1.07554 1.10294 1.97618 1.24707 1.01037 0.94350 1.01213 0.87652 1.23438 0.98056 0.99112 0.95627 1.22755 0.95738 0.98891 0.96729 0.88175 1.21345 0.97865 0.89181 0.90861 1.45980 1.27211 1.32237 1.33126 1.20588 0.83003 0.86102 0.80791 1.90773 1.27803 1.50726 1.70316 1.20130 0.97995 0.97763 0.95369 1.19475 0.90631 0.99966 0.97752 1.20590 0.99864 1.03880 0.95429 1.20650 0.97527 1.02029 1.01067 1.20839 0.96470 1.04730 0.90369 1.24834 0.85809 1.01759 1.03588 1.86463 1.62084 1.30318 1.56417 0.93941 0.79890 0.90816 0.73368 1.41782 1.17101 1.36150 1.17955 1.22759 0.93373 0.97948 0.99894 0.90417 0.90510 0.88047 0.88392 0.90837 0.91165 0.90907 0.76558 0.86532 0.88328 0.84587 0.84126 0.87337 0.76935 1.18080 1.17914 0.75123 0.89914 0.88582 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.17 10.76 101.05 1.09 1.26 16 2 S -0.25 -0.18 22.19 -107.50 -2.39 -2.57 16 3 C -0.08 0.14 4.27 -25.83 -0.11 0.03 16 4 H 0.11 -0.24 8.14 -51.93 -0.42 -0.66 16 5 C -0.12 0.33 7.24 -25.83 -0.19 0.14 16 6 C -0.12 0.39 3.75 -89.81 -0.34 0.05 16 7 H 0.10 -0.43 8.14 -51.93 -0.42 -0.85 16 8 C 0.13 -0.18 5.50 -4.04 -0.02 -0.20 16 9 N -0.73 1.53 5.56 -60.29 -0.33 1.20 16 10 C 0.51 0.35 7.82 -10.98 -0.09 0.26 16 11 O -0.52 -2.87 16.03 5.56 0.09 -2.78 16 12 C -0.07 0.12 6.24 -29.04 -0.18 -0.06 16 13 C 0.04 0.05 5.66 -81.79 -0.46 -0.41 16 14 C -0.17 -0.42 10.77 -39.78 -0.43 -0.85 16 15 C -0.19 -0.41 9.37 -39.78 -0.37 -0.78 16 16 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 17 C -0.05 -0.04 3.08 36.01 0.11 0.07 16 18 O -0.55 -0.72 12.88 -35.23 -0.45 -1.17 16 19 Si 0.72 -0.21 30.58 -169.99 -5.20 -5.41 16 20 N -0.54 -0.74 6.07 -5.44 -0.03 -0.78 16 21 C -0.10 0.21 7.23 -25.92 -0.19 0.02 16 22 H 0.08 -0.16 8.14 -51.92 -0.42 -0.58 16 23 H 0.08 -0.16 8.14 -51.92 -0.42 -0.58 16 24 H 0.10 -0.18 8.14 -51.92 -0.42 -0.60 16 25 H 0.10 -0.14 7.88 -51.93 -0.41 -0.55 16 26 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 27 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 28 H 0.07 0.01 7.88 -51.93 -0.41 -0.40 16 29 H 0.40 -1.99 8.47 -40.82 -0.35 -2.34 16 30 H 0.12 -0.45 8.14 -51.93 -0.42 -0.87 16 31 H 0.10 -0.39 8.14 -51.93 -0.42 -0.82 16 32 H 0.14 0.18 8.06 -52.49 -0.42 -0.25 16 33 H 0.14 0.06 6.22 -52.49 -0.33 -0.27 16 34 H 0.11 0.08 7.96 -51.93 -0.41 -0.33 16 35 H 0.38 -0.67 8.70 45.56 0.40 -0.28 16 36 H -0.26 -0.64 7.11 56.52 0.40 -0.24 16 37 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 38 H 0.41 -0.09 8.96 -40.82 -0.37 -0.45 16 39 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 40 H 0.10 -0.11 8.06 -51.92 -0.42 -0.52 16 LS Contribution 349.33 15.07 5.26 5.26 Total: 0.00 -8.79 349.33 -10.90 -19.69 By element: Atomic # 1 Polarization: -6.31 SS G_CDS: -6.14 Total: -12.45 kcal Atomic # 6 Polarization: 0.70 SS G_CDS: -1.71 Total: -1.01 kcal Atomic # 7 Polarization: 0.79 SS G_CDS: -0.37 Total: 0.42 kcal Atomic # 8 Polarization: -3.58 SS G_CDS: -0.36 Total: -3.95 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: -5.20 Total: -5.41 kcal Atomic # 16 Polarization: -0.18 SS G_CDS: -2.39 Total: -2.57 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -8.79 -10.90 -19.69 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18360570_14644196.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.155 kcal (2) G-P(sol) polarization free energy of solvation -8.792 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.362 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.901 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.693 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.538 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds