Wall clock time and date at job start Tue Mar 9 2021 12:58:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81400 * 1 3 3 C 1.81396 * 103.00067 * 2 1 4 4 H 1.09000 * 112.90991 * 43.75060 * 3 2 1 5 5 C 1.53786 * 113.61571 * 174.99869 * 3 2 1 6 6 C 1.53781 * 87.17350 * 140.02404 * 5 3 2 7 7 H 1.09003 * 113.61462 * 89.16045 * 6 5 3 8 8 C 1.52991 * 113.61529 * 219.97788 * 6 5 3 9 9 N 1.46508 * 109.47429 * 184.99923 * 8 6 5 10 10 C 1.34777 * 120.00013 * 180.02562 * 9 8 6 11 11 O 1.21281 * 120.00116 * 359.97438 * 10 9 8 12 12 C 1.50698 * 119.99720 * 180.02562 * 10 9 8 13 13 O 1.42897 * 109.47008 * 179.97438 * 12 10 9 14 14 C 1.35904 * 117.00158 * 180.02562 * 13 12 10 15 15 C 1.38738 * 120.05209 * 359.72907 * 14 13 12 16 16 C 1.38148 * 119.94208 * 179.74755 * 15 14 13 17 17 C 1.38265 * 120.05241 * 0.50481 * 16 15 14 18 18 C 1.50705 * 119.94198 * 179.74870 * 17 16 15 19 19 O 1.42900 * 109.47151 * 245.02086 * 18 17 16 20 20 Si 1.86296 * 109.47001 * 5.01875 * 18 17 16 21 21 C 1.38263 * 120.11514 * 359.76263 * 17 16 15 22 22 C 1.38140 * 120.05501 * 359.97438 * 21 17 16 23 23 C 1.53781 * 87.08070 * 334.52830 * 6 5 3 24 24 H 1.08999 * 109.47388 * 180.02562 * 1 2 3 25 25 H 1.09000 * 109.46955 * 300.00272 * 1 2 3 26 26 H 1.09004 * 109.46830 * 59.99795 * 1 2 3 27 27 H 1.09002 * 113.61357 * 25.43320 * 5 3 2 28 28 H 1.09002 * 113.61608 * 254.61482 * 5 3 2 29 29 H 1.08997 * 109.47550 * 304.99814 * 8 6 5 30 30 H 1.09002 * 109.47334 * 65.00084 * 8 6 5 31 31 H 0.96996 * 119.99136 * 0.02562 * 9 8 6 32 32 H 1.08993 * 109.47235 * 299.99988 * 12 10 9 33 33 H 1.09005 * 109.47230 * 60.00102 * 12 10 9 34 34 H 1.07999 * 120.02705 * 359.97438 * 15 14 13 35 35 H 1.07996 * 119.97056 * 180.22267 * 16 15 14 36 36 H 1.09001 * 109.47254 * 125.01696 * 18 17 16 37 37 H 0.96697 * 113.99809 * 180.02562 * 19 18 17 38 38 H 1.48506 * 110.00066 * 178.68243 * 20 18 17 39 39 H 1.48498 * 110.00080 * 300.00015 * 20 18 17 40 40 H 1.08003 * 119.97263 * 179.97438 * 21 17 16 41 41 H 1.08006 * 120.02994 * 179.97438 * 22 21 17 42 42 H 1.09005 * 113.61471 * 139.98321 * 23 6 5 43 43 H 1.08996 * 113.61178 * 270.79663 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7675 0.0000 4 1 1.6109 2.3441 0.6943 5 6 3.7284 2.0520 0.1228 6 6 3.5229 3.1750 -0.9074 7 1 3.2680 4.1361 -0.4606 8 6 4.6516 3.2783 -1.9349 9 7 4.4259 4.4441 -2.7930 10 6 5.2989 4.7352 -3.7777 11 8 6.2715 4.0322 -3.9533 12 6 5.0670 5.9347 -4.6599 13 8 6.1212 6.0310 -5.6197 14 6 6.0632 7.0664 -6.4982 15 6 5.0101 7.9678 -6.4411 16 6 4.9562 9.0224 -7.3318 17 6 5.9451 9.1740 -8.2862 18 6 5.8808 10.3221 -9.2602 19 8 5.7027 9.8143 -10.5840 20 14 4.4478 11.4289 -8.8217 21 6 6.9927 8.2738 -8.3487 22 6 7.0541 7.2207 -7.4568 23 6 2.3033 2.3842 -1.4093 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3633 0.5139 0.8900 26 1 -0.3633 0.5139 -0.8900 27 1 4.3573 1.2381 -0.2381 28 1 4.0259 2.4120 1.1077 29 1 5.6050 3.3869 -1.4178 30 1 4.6705 2.3757 -2.5458 31 1 3.6482 5.0064 -2.6522 32 1 4.1134 5.8267 -5.1767 33 1 5.0489 6.8372 -4.0488 34 1 4.2352 7.8472 -5.6986 35 1 4.1386 9.7264 -7.2855 36 1 6.8085 10.8924 -9.2115 37 1 5.6530 10.4994 -11.2647 38 1 4.3925 12.5823 -9.7556 39 1 3.1770 10.6633 -8.8844 40 1 7.7637 8.3941 -9.0954 41 1 7.8724 6.5175 -7.5063 42 1 1.4488 3.0125 -1.6610 43 1 2.5423 1.6622 -2.1901 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18360570_2989410.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:47 Heat of formation + Delta-G solvation = -45.977041 kcal Electronic energy + Delta-G solvation = -23729.893871 eV Core-core repulsion = 20062.414021 eV Total energy + Delta-G solvation = -3667.479850 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.123 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -41.52520 -40.76071 -39.84444 -38.84568 -37.29395 -35.57892 -32.47049 -31.82528 -30.77879 -29.94125 -28.48263 -26.90292 -26.16643 -24.41053 -23.72220 -22.24333 -21.74742 -20.68461 -19.46257 -18.62830 -18.48887 -17.52647 -17.43943 -17.25906 -16.85606 -16.75036 -16.44605 -15.89680 -15.66849 -15.50759 -15.25142 -14.87652 -14.82211 -14.42890 -14.33910 -14.17965 -14.09508 -13.93057 -13.65547 -13.61654 -13.53624 -13.38973 -12.90730 -12.46899 -12.19731 -12.06649 -11.93542 -11.88487 -11.68183 -11.54341 -10.93667 -10.82434 -10.48872 -10.21329 -9.99915 -9.18195 -8.68629 -5.00264 0.32033 0.34362 0.68461 1.26106 1.44172 1.49117 1.54423 1.55913 1.92008 2.54034 2.64430 3.21412 3.25649 3.36078 3.42352 3.52948 3.58517 3.73250 3.81484 3.85875 3.88702 3.94024 3.98069 4.13844 4.16567 4.16973 4.27775 4.37003 4.47378 4.49309 4.55525 4.60139 4.66817 4.68673 4.72109 4.78923 4.87357 4.98463 5.14481 5.18875 5.28205 5.29478 5.55113 5.70222 6.22225 6.36861 6.43854 7.07982 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.253 6.253 3 C -0.085 4.085 4 H 0.106 0.894 5 C -0.100 4.100 6 C -0.121 4.121 7 H 0.102 0.898 8 C 0.132 3.868 9 N -0.727 5.727 10 C 0.515 3.485 11 O -0.512 6.512 12 C 0.040 3.960 13 O -0.288 6.288 14 C 0.134 3.866 15 C -0.206 4.206 16 C -0.074 4.074 17 C -0.110 4.110 18 C -0.072 4.072 19 O -0.536 6.536 20 Si 0.681 3.319 21 C -0.050 4.050 22 C -0.145 4.145 23 C -0.123 4.123 24 H 0.101 0.899 25 H 0.076 0.924 26 H 0.077 0.923 27 H 0.096 0.904 28 H 0.083 0.917 29 H 0.074 0.926 30 H 0.075 0.925 31 H 0.402 0.598 32 H 0.095 0.905 33 H 0.096 0.904 34 H 0.132 0.868 35 H 0.130 0.870 36 H 0.076 0.924 37 H 0.379 0.621 38 H -0.262 1.262 39 H -0.256 1.256 40 H 0.133 0.867 41 H 0.136 0.864 42 H 0.073 0.927 43 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.398 5.170 3.584 7.676 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.024 6.024 3 C -0.214 4.214 4 H 0.124 0.876 5 C -0.139 4.139 6 C -0.141 4.141 7 H 0.120 0.880 8 C 0.009 3.991 9 N -0.381 5.381 10 C 0.299 3.701 11 O -0.385 6.385 12 C -0.039 4.039 13 O -0.200 6.200 14 C 0.088 3.912 15 C -0.225 4.225 16 C -0.091 4.091 17 C -0.111 4.111 18 C -0.181 4.181 19 O -0.344 6.344 20 Si 0.583 3.417 21 C -0.068 4.068 22 C -0.164 4.164 23 C -0.163 4.163 24 H 0.120 0.880 25 H 0.095 0.905 26 H 0.096 0.904 27 H 0.114 0.886 28 H 0.102 0.898 29 H 0.093 0.907 30 H 0.093 0.907 31 H 0.236 0.764 32 H 0.112 0.888 33 H 0.114 0.886 34 H 0.150 0.850 35 H 0.147 0.853 36 H 0.094 0.906 37 H 0.227 0.773 38 H -0.187 1.187 39 H -0.181 1.181 40 H 0.151 0.849 41 H 0.154 0.846 42 H 0.092 0.908 43 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -3.621 3.349 3.550 6.077 hybrid contribution -1.369 1.341 -0.992 2.158 sum -4.990 4.690 2.558 7.310 Atomic orbital electron populations 1.23375 0.94123 1.06663 1.04924 1.87016 1.07565 1.10229 1.97611 1.24719 1.01061 0.94404 1.01168 0.87572 1.22763 0.93394 0.97890 0.99893 1.22761 0.95633 0.99037 0.96699 0.87984 1.21405 0.98310 0.88219 0.91199 1.45791 1.27707 1.30798 1.33823 1.20035 0.83222 0.85923 0.80925 1.90798 1.28272 1.50234 1.69219 1.22468 0.91754 0.98232 0.91424 1.86173 1.46029 1.45394 1.42425 1.19065 0.94714 0.87152 0.90226 1.21139 0.99960 0.97689 1.03672 1.20759 0.97229 0.96785 0.94375 1.19152 0.96595 0.98084 0.97238 1.24737 1.09232 0.99886 0.84268 1.86602 1.95395 1.36832 1.15540 0.95141 0.77765 0.78303 0.90496 1.20837 0.97322 0.92156 0.96507 1.20510 0.99599 1.00499 0.95769 1.23470 0.98052 0.99129 0.95660 0.88043 0.90487 0.90425 0.88554 0.89817 0.90743 0.90688 0.76351 0.88761 0.88628 0.85005 0.85272 0.90647 0.77316 1.18691 1.18085 0.84911 0.84577 0.90816 0.88379 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.18 10.76 101.05 1.09 1.27 16 2 S -0.25 -0.16 22.18 -107.50 -2.38 -2.54 16 3 C -0.08 0.16 4.29 -25.77 -0.11 0.05 16 4 H 0.11 -0.27 8.14 -51.93 -0.42 -0.69 16 5 C -0.10 0.23 7.22 -25.92 -0.19 0.05 16 6 C -0.12 0.43 3.76 -89.81 -0.34 0.09 16 7 H 0.10 -0.49 8.14 -51.93 -0.42 -0.92 16 8 C 0.13 -0.21 5.51 -4.04 -0.02 -0.24 16 9 N -0.73 1.62 5.56 -60.29 -0.33 1.28 16 10 C 0.51 0.63 7.91 -10.99 -0.09 0.54 16 11 O -0.51 -3.33 16.50 -14.35 -0.24 -3.57 16 12 C 0.04 -0.04 5.22 36.00 0.19 0.15 16 13 O -0.29 -0.86 9.67 -39.35 -0.38 -1.24 16 14 C 0.13 0.29 6.69 -39.22 -0.26 0.02 16 15 C -0.21 -0.03 9.04 -39.43 -0.36 -0.39 16 16 C -0.07 -0.03 8.66 -39.60 -0.34 -0.37 16 17 C -0.11 -0.15 5.39 -104.60 -0.56 -0.71 16 18 C -0.07 0.00 2.79 36.01 0.10 0.10 16 19 O -0.54 -0.72 12.81 -35.23 -0.45 -1.17 16 20 Si 0.68 -0.74 29.85 -169.99 -5.07 -5.82 16 21 C -0.05 -0.08 9.68 -39.61 -0.38 -0.47 16 22 C -0.15 -0.33 9.99 -39.44 -0.39 -0.72 16 23 C -0.12 0.36 7.23 -25.78 -0.19 0.17 16 24 H 0.10 -0.18 8.14 -51.92 -0.42 -0.60 16 25 H 0.08 -0.16 8.14 -51.92 -0.42 -0.59 16 26 H 0.08 -0.16 8.14 -51.92 -0.42 -0.59 16 27 H 0.10 -0.13 8.06 -51.93 -0.42 -0.55 16 28 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 29 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.07 -0.01 7.84 -51.93 -0.41 -0.42 16 31 H 0.40 -2.22 8.47 -40.82 -0.35 -2.56 16 32 H 0.09 -0.32 7.65 -51.93 -0.40 -0.72 16 33 H 0.10 -0.37 7.67 -51.93 -0.40 -0.77 16 34 H 0.13 -0.38 6.30 -52.49 -0.33 -0.71 16 35 H 0.13 -0.20 4.86 -52.49 -0.26 -0.45 16 36 H 0.08 -0.13 7.96 -51.93 -0.41 -0.54 16 37 H 0.38 -1.00 8.74 45.56 0.40 -0.61 16 38 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 39 H -0.26 -0.48 7.05 56.52 0.40 -0.08 16 40 H 0.13 0.07 8.06 -52.48 -0.42 -0.36 16 41 H 0.14 0.22 8.06 -52.48 -0.42 -0.20 16 42 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 43 H 0.10 -0.16 7.86 -51.93 -0.41 -0.57 16 LS Contribution 371.51 15.07 5.60 5.60 Total: 0.00 -9.98 371.51 -11.53 -21.51 By element: Atomic # 1 Polarization: -7.18 SS G_CDS: -6.40 Total: -13.59 kcal Atomic # 6 Polarization: 1.40 SS G_CDS: -1.86 Total: -0.46 kcal Atomic # 7 Polarization: 1.62 SS G_CDS: -0.33 Total: 1.28 kcal Atomic # 8 Polarization: -4.91 SS G_CDS: -1.07 Total: -5.98 kcal Atomic # 14 Polarization: -0.74 SS G_CDS: -5.07 Total: -5.82 kcal Atomic # 16 Polarization: -0.16 SS G_CDS: -2.38 Total: -2.54 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -9.98 -11.53 -21.51 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18360570_2989410.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.469 kcal (2) G-P(sol) polarization free energy of solvation -9.983 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.452 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.525 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.508 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.977 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds