Wall clock time and date at job start Tue Mar 9 2021 12:59:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81394 * 1 3 3 C 1.81400 * 103.00022 * 2 1 4 4 H 1.09003 * 112.84953 * 43.80560 * 3 2 1 5 5 C 1.53777 * 113.61703 * 175.00038 * 3 2 1 6 6 C 1.53777 * 87.08361 * 139.98429 * 5 3 2 7 7 H 1.08992 * 113.61984 * 89.20096 * 6 5 3 8 8 C 1.53005 * 113.61610 * 220.02272 * 6 5 3 9 9 N 1.46493 * 109.47193 * 184.99687 * 8 6 5 10 10 C 1.34780 * 120.00089 * 179.97438 * 9 8 6 11 11 O 1.21283 * 119.99570 * 0.02562 * 10 9 8 12 12 C 1.50701 * 120.00221 * 179.97438 * 10 9 8 13 13 O 1.42901 * 109.47076 * 180.02562 * 12 10 9 14 14 C 1.35898 * 117.00043 * 180.02562 * 13 12 10 15 15 C 1.38707 * 120.05730 * 179.97438 * 14 13 12 16 16 C 1.38172 * 119.94461 * 179.97438 * 15 14 13 17 17 C 1.50696 * 119.97101 * 180.02562 * 16 15 14 18 18 O 1.42898 * 109.46949 * 64.98112 * 17 16 15 19 19 Si 1.86300 * 109.47178 * 184.97899 * 17 16 15 20 20 C 1.38241 * 120.05236 * 359.97438 * 16 15 14 21 21 C 1.38288 * 120.11556 * 359.97438 * 20 16 15 22 22 C 1.38119 * 120.05366 * 0.28328 * 21 20 16 23 23 C 1.53776 * 113.61758 * 272.49848 * 3 2 1 24 24 H 1.09005 * 109.46954 * 299.99858 * 1 2 3 25 25 H 1.08997 * 109.47523 * 59.99623 * 1 2 3 26 26 H 1.09001 * 109.46912 * 180.02562 * 1 2 3 27 27 H 1.09000 * 113.61294 * 25.43203 * 5 3 2 28 28 H 1.09005 * 113.69266 * 254.54162 * 5 3 2 29 29 H 1.08996 * 109.46991 * 64.99221 * 8 6 5 30 30 H 1.09004 * 109.46773 * 305.00048 * 8 6 5 31 31 H 0.97000 * 120.00391 * 359.97438 * 9 8 6 32 32 H 1.09004 * 109.46626 * 60.00490 * 12 10 9 33 33 H 1.08999 * 109.47060 * 300.00503 * 12 10 9 34 34 H 1.07998 * 120.02706 * 359.96025 * 15 14 13 35 35 H 1.09000 * 109.47732 * 304.98426 * 17 16 15 36 36 H 0.96708 * 114.00200 * 179.97438 * 18 17 16 37 37 H 1.48503 * 109.99935 * 300.00300 * 19 17 16 38 38 H 1.48502 * 109.99801 * 61.31764 * 19 17 16 39 39 H 1.08006 * 119.93966 * 180.02562 * 20 16 15 40 40 H 1.08002 * 119.96980 * 179.97438 * 21 20 16 41 41 H 1.07998 * 120.02956 * 179.72220 * 22 21 20 42 42 H 1.09006 * 113.61806 * 105.46899 * 23 3 2 43 43 H 1.09000 * 113.61306 * 334.56947 * 23 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8139 0.0000 0.0000 3 6 2.2220 1.7675 0.0000 4 1 1.6109 2.3430 0.6953 5 6 3.7282 2.0520 0.1228 6 6 3.5205 3.1739 -0.9083 7 1 3.2657 4.1352 -0.4623 8 6 4.6478 3.2767 -1.9377 9 7 4.4200 4.4414 -2.7966 10 6 5.2918 4.7326 -3.7823 11 8 6.2646 4.0300 -3.9586 12 6 5.0572 5.9303 -4.6663 13 8 6.1101 6.0264 -5.6276 14 6 6.0497 7.0602 -6.5077 15 6 7.0391 7.2142 -7.4675 16 6 6.9750 8.2658 -8.3615 17 6 8.0493 8.4334 -9.4049 18 8 8.0123 7.3271 -10.3086 19 14 7.7591 10.0144 -10.3467 20 6 5.9257 9.1637 -8.3001 21 6 4.9375 9.0117 -7.3448 22 6 4.9998 7.9652 -6.4455 23 6 2.3008 2.3816 -1.4076 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 0.5139 -0.8899 26 1 -0.3633 -1.0277 0.0005 27 1 4.3571 1.2382 -0.2381 28 1 4.0270 2.4133 1.1069 29 1 4.6664 2.3735 -2.5475 30 1 5.6018 3.3865 -1.4219 31 1 3.6418 5.0030 -2.6559 32 1 5.0380 6.8336 -4.0565 33 1 4.1035 5.8199 -5.1823 34 1 7.8589 6.5129 -7.5160 35 1 9.0244 8.4734 -8.9195 36 1 8.6779 7.3687 -11.0089 37 1 6.4328 9.9723 -11.0134 38 1 7.8267 11.1754 -9.4232 39 1 5.8772 9.9848 -9.0000 40 1 4.1189 9.7148 -7.2987 41 1 4.2302 7.8495 -5.6967 42 1 1.4455 3.0091 -1.6588 43 1 2.5393 1.6579 -2.1870 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18360570_4860298.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:19 Heat of formation + Delta-G solvation = -45.425548 kcal Electronic energy + Delta-G solvation = -23813.706873 eV Core-core repulsion = 20146.250937 eV Total energy + Delta-G solvation = -3667.455935 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.123 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.55772 -40.79089 -39.86757 -38.79869 -37.26843 -35.59251 -32.62609 -31.89944 -30.50637 -29.92077 -28.36164 -26.91806 -26.73637 -24.22822 -23.70758 -22.45938 -21.65524 -20.67812 -19.15610 -18.54562 -18.40218 -17.62473 -17.52793 -17.36677 -17.05931 -16.81715 -16.40932 -15.92328 -15.83155 -15.40495 -15.21138 -14.83442 -14.70228 -14.56482 -14.34982 -14.24070 -14.17952 -13.76356 -13.66305 -13.64072 -13.59185 -13.23245 -12.91617 -12.36207 -12.20338 -12.09501 -12.06771 -11.93771 -11.79159 -11.55081 -10.94604 -10.83201 -10.37503 -10.22422 -9.92252 -9.29259 -8.69089 -4.97291 0.16988 0.36872 0.67876 1.23871 1.44241 1.47730 1.53898 1.63973 1.96538 2.51119 2.61110 3.20841 3.24749 3.37742 3.41821 3.51345 3.57721 3.72321 3.78255 3.86274 3.86491 3.95760 3.96953 4.13421 4.16011 4.16357 4.17239 4.21944 4.46913 4.48286 4.54672 4.58638 4.59651 4.67710 4.71618 4.78069 4.86689 4.93977 5.13688 5.18690 5.28280 5.30097 5.41299 5.60360 6.20239 6.35051 6.62627 7.06645 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.253 6.253 3 C -0.084 4.084 4 H 0.106 0.894 5 C -0.100 4.100 6 C -0.121 4.121 7 H 0.102 0.898 8 C 0.132 3.868 9 N -0.727 5.727 10 C 0.515 3.485 11 O -0.511 6.511 12 C 0.040 3.960 13 O -0.287 6.287 14 C 0.131 3.869 15 C -0.117 4.117 16 C -0.035 4.035 17 C -0.075 4.075 18 O -0.544 6.544 19 Si 0.689 3.311 20 C -0.160 4.160 21 C -0.071 4.071 22 C -0.206 4.206 23 C -0.123 4.123 24 H 0.076 0.924 25 H 0.077 0.923 26 H 0.101 0.899 27 H 0.096 0.904 28 H 0.083 0.917 29 H 0.075 0.925 30 H 0.074 0.926 31 H 0.402 0.598 32 H 0.095 0.905 33 H 0.095 0.905 34 H 0.138 0.862 35 H 0.077 0.923 36 H 0.383 0.617 37 H -0.250 1.250 38 H -0.255 1.255 39 H 0.121 0.879 40 H 0.131 0.869 41 H 0.132 0.868 42 H 0.073 0.927 43 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.111 4.391 0.798 5.440 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.024 6.024 3 C -0.213 4.213 4 H 0.124 0.876 5 C -0.139 4.139 6 C -0.141 4.141 7 H 0.120 0.880 8 C 0.009 3.991 9 N -0.381 5.381 10 C 0.299 3.701 11 O -0.384 6.384 12 C -0.038 4.038 13 O -0.199 6.199 14 C 0.086 3.914 15 C -0.136 4.136 16 C -0.035 4.035 17 C -0.185 4.185 18 O -0.350 6.350 19 Si 0.590 3.410 20 C -0.178 4.178 21 C -0.089 4.089 22 C -0.225 4.225 23 C -0.163 4.163 24 H 0.095 0.905 25 H 0.096 0.904 26 H 0.120 0.880 27 H 0.115 0.885 28 H 0.102 0.898 29 H 0.093 0.907 30 H 0.093 0.907 31 H 0.236 0.764 32 H 0.112 0.888 33 H 0.113 0.887 34 H 0.156 0.844 35 H 0.095 0.905 36 H 0.231 0.769 37 H -0.175 1.175 38 H -0.179 1.179 39 H 0.138 0.862 40 H 0.149 0.851 41 H 0.149 0.851 42 H 0.092 0.908 43 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -2.587 3.315 1.010 4.325 hybrid contribution -1.741 1.100 0.789 2.206 sum -4.328 4.415 1.799 6.440 Atomic orbital electron populations 1.23374 0.94117 1.06669 1.04920 1.87017 1.07570 1.10230 1.97620 1.24672 1.01060 0.94431 1.01163 0.87577 1.22765 0.93402 0.97890 0.99882 1.22766 0.95646 0.99043 0.96695 0.88009 1.21409 0.98320 0.88236 0.91167 1.45786 1.27678 1.30901 1.33745 1.20016 0.83257 0.85882 0.80939 1.90799 1.28225 1.50165 1.69237 1.22469 0.91772 0.98250 0.91357 1.86173 1.46106 1.45396 1.42244 1.19011 0.94795 0.87360 0.90261 1.20257 0.99533 0.99270 0.94498 1.19133 0.94816 0.94603 0.94938 1.24742 0.99159 1.00686 0.93934 1.86508 1.60451 1.44743 1.43316 0.95289 0.85483 0.75125 0.85136 1.20825 0.95610 1.00458 1.00921 1.20850 0.97822 0.96772 0.93501 1.21273 0.99903 0.97906 1.03403 1.23427 0.98054 0.99145 0.95694 0.90492 0.90428 0.88031 0.88536 0.89802 0.90655 0.90746 0.76367 0.88754 0.88747 0.84412 0.90492 0.76898 1.17515 1.17941 0.86186 0.85109 0.85068 0.90814 0.88348 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.17 10.76 101.05 1.09 1.25 16 2 S -0.25 -0.19 22.17 -107.50 -2.38 -2.58 16 3 C -0.08 0.14 4.28 -25.92 -0.11 0.03 16 4 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 5 C -0.10 0.21 7.23 -25.92 -0.19 0.03 16 6 C -0.12 0.40 3.76 -89.81 -0.34 0.06 16 7 H 0.10 -0.46 8.14 -51.93 -0.42 -0.89 16 8 C 0.13 -0.17 5.51 -4.04 -0.02 -0.20 16 9 N -0.73 1.33 5.56 -60.29 -0.33 0.99 16 10 C 0.51 0.88 7.91 -10.98 -0.09 0.80 16 11 O -0.51 -3.55 16.50 -14.35 -0.24 -3.79 16 12 C 0.04 -0.01 5.22 36.01 0.19 0.17 16 13 O -0.29 -1.11 9.67 -39.33 -0.38 -1.49 16 14 C 0.13 0.43 6.69 -39.22 -0.26 0.17 16 15 C -0.12 -0.46 9.62 -39.43 -0.38 -0.84 16 16 C -0.03 -0.11 5.38 -104.65 -0.56 -0.67 16 17 C -0.07 -0.05 2.79 36.00 0.10 0.05 16 18 O -0.54 -0.57 12.81 -35.23 -0.45 -1.02 16 19 Si 0.69 -0.54 29.85 -169.99 -5.07 -5.62 16 20 C -0.16 -0.42 8.67 -39.56 -0.34 -0.76 16 21 C -0.07 -0.09 10.04 -39.61 -0.40 -0.49 16 22 C -0.21 -0.22 9.04 -39.43 -0.36 -0.58 16 23 C -0.12 0.33 7.22 -25.92 -0.19 0.14 16 24 H 0.08 -0.15 8.14 -51.92 -0.42 -0.58 16 25 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 26 H 0.10 -0.17 8.14 -51.92 -0.42 -0.59 16 27 H 0.10 -0.11 8.06 -51.93 -0.42 -0.53 16 28 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 29 H 0.08 0.01 7.84 -51.93 -0.41 -0.40 16 30 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.40 -2.05 8.47 -40.82 -0.35 -2.40 16 32 H 0.09 -0.29 7.65 -51.93 -0.40 -0.69 16 33 H 0.09 -0.27 7.67 -51.93 -0.40 -0.67 16 34 H 0.14 0.53 8.06 -52.49 -0.42 0.10 16 35 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 36 H 0.38 -1.61 8.74 45.56 0.40 -1.21 16 37 H -0.25 -0.56 7.05 56.52 0.40 -0.16 16 38 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 39 H 0.12 0.23 4.86 -52.48 -0.26 -0.03 16 40 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 41 H 0.13 -0.27 6.30 -52.49 -0.33 -0.60 16 42 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 43 H 0.10 -0.14 7.85 -51.93 -0.41 -0.55 16 LS Contribution 371.48 15.07 5.60 5.60 Total: 0.00 -10.46 371.48 -11.53 -21.99 By element: Atomic # 1 Polarization: -6.84 SS G_CDS: -6.40 Total: -13.25 kcal Atomic # 6 Polarization: 1.02 SS G_CDS: -1.86 Total: -0.83 kcal Atomic # 7 Polarization: 1.33 SS G_CDS: -0.33 Total: 0.99 kcal Atomic # 8 Polarization: -5.24 SS G_CDS: -1.07 Total: -6.30 kcal Atomic # 14 Polarization: -0.54 SS G_CDS: -5.07 Total: -5.62 kcal Atomic # 16 Polarization: -0.19 SS G_CDS: -2.38 Total: -2.58 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -10.46 -11.53 -21.99 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18360570_4860298.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.437 kcal (2) G-P(sol) polarization free energy of solvation -10.463 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.900 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.526 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.989 kcal (6) G-S(sol) free energy of system = (1) + (5) -45.426 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds