Wall clock time and date at job start Tue Mar 9 2021 12:59:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81400 * 1 3 3 C 1.81396 * 103.00067 * 2 1 4 4 H 1.09000 * 112.90991 * 43.75060 * 3 2 1 5 5 C 1.53786 * 113.61571 * 174.99869 * 3 2 1 6 6 C 1.53781 * 87.17350 * 140.02404 * 5 3 2 7 7 H 1.08999 * 113.61567 * 89.07405 * 6 5 3 8 8 C 1.52991 * 113.61529 * 219.97788 * 6 5 3 9 9 N 1.46508 * 109.47429 * 184.99923 * 8 6 5 10 10 C 1.34777 * 120.00013 * 180.02562 * 9 8 6 11 11 O 1.21698 * 119.99818 * 359.97438 * 10 9 8 12 12 C 1.46677 * 119.99665 * 180.02562 * 10 9 8 13 13 C 1.37867 * 126.22983 * 180.02562 * 12 10 9 14 14 C 1.39837 * 107.08265 * 179.97438 * 13 12 10 15 15 C 1.35454 * 107.86561 * 0.02562 * 14 13 12 16 16 C 1.50700 * 125.56321 * 179.97438 * 15 14 13 17 17 O 1.42910 * 109.46836 * 245.02643 * 16 15 14 18 18 Si 1.86300 * 109.47425 * 5.02092 * 16 15 14 19 19 N 1.35533 * 108.87253 * 359.76734 * 15 14 13 20 20 C 1.53781 * 87.08070 * 334.52830 * 6 5 3 21 21 H 1.08999 * 109.47388 * 180.02562 * 1 2 3 22 22 H 1.09000 * 109.46955 * 300.00272 * 1 2 3 23 23 H 1.09004 * 109.46830 * 59.99795 * 1 2 3 24 24 H 1.09002 * 113.61357 * 25.43320 * 5 3 2 25 25 H 1.09002 * 113.61608 * 254.61482 * 5 3 2 26 26 H 1.08997 * 109.47550 * 304.99814 * 8 6 5 27 27 H 1.09002 * 109.47334 * 65.00084 * 8 6 5 28 28 H 0.96996 * 119.99136 * 0.02562 * 9 8 6 29 29 H 1.08001 * 126.46307 * 359.97438 * 13 12 10 30 30 H 1.08005 * 126.06939 * 180.02562 * 14 13 12 31 31 H 1.08994 * 109.47476 * 125.02762 * 16 15 14 32 32 H 0.96692 * 113.99959 * 59.99665 * 17 16 15 33 33 H 1.48497 * 110.00292 * 180.02562 * 18 16 15 34 34 H 1.48506 * 110.00019 * 301.32370 * 18 16 15 35 35 H 0.96997 * 125.67982 * 180.26461 * 19 15 14 36 36 H 1.09005 * 113.61471 * 139.98321 * 20 6 5 37 37 H 1.09003 * 113.61469 * 270.88099 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7675 0.0000 4 1 1.6109 2.3441 0.6943 5 6 3.7284 2.0520 0.1228 6 6 3.5229 3.1750 -0.9074 7 1 3.2666 4.1357 -0.4607 8 6 4.6516 3.2783 -1.9349 9 7 4.4259 4.4441 -2.7930 10 6 5.2989 4.7352 -3.7777 11 8 6.2748 4.0298 -3.9538 12 6 5.0731 5.9027 -4.6364 13 6 5.8780 6.3173 -5.6761 14 6 5.2907 7.4650 -6.2178 15 6 4.1627 7.7259 -5.5146 16 6 3.2213 8.8761 -5.7633 17 8 3.2381 9.7572 -4.6383 18 14 3.7620 9.8032 -7.2861 19 7 4.0166 6.7812 -4.5539 20 6 2.3033 2.3842 -1.4093 21 1 -0.3634 -1.0276 0.0005 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5139 -0.8900 24 1 4.3573 1.2381 -0.2381 25 1 4.0259 2.4120 1.1077 26 1 5.6050 3.3869 -1.4178 27 1 4.6705 2.3757 -2.5458 28 1 3.6482 5.0064 -2.6522 29 1 6.7901 5.8448 -6.0096 30 1 5.6693 8.0411 -7.0492 31 1 2.2113 8.4937 -5.9103 32 1 4.1072 10.1358 -4.4482 33 1 2.8419 10.9404 -7.5419 34 1 5.1495 10.3026 -7.1108 35 1 3.2893 6.7330 -3.9139 36 1 1.4488 3.0125 -1.6610 37 1 2.5425 1.6611 -2.1892 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18360570_6580494.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:37 Heat of formation + Delta-G solvation = 0.901720 kcal Electronic energy + Delta-G solvation = -19475.389468 eV Core-core repulsion = 16346.962474 eV Total energy + Delta-G solvation = -3128.426994 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.103 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -42.52893 -40.68546 -39.59768 -37.91212 -35.62249 -32.30804 -31.56427 -30.06619 -29.49546 -26.94594 -26.75215 -24.41435 -22.92812 -21.56196 -21.35436 -20.75425 -19.81122 -18.32264 -17.63180 -17.02269 -16.84738 -16.64789 -16.28915 -16.13990 -15.42089 -15.19593 -15.08589 -15.00974 -14.57715 -14.38623 -14.20219 -14.11026 -13.97344 -13.67357 -13.66428 -13.59801 -12.92098 -12.38872 -12.08882 -11.95926 -11.91368 -11.55583 -11.21839 -10.91525 -10.84966 -10.23955 -10.09417 -9.28669 -8.69481 -5.00147 0.35065 0.67606 1.08277 1.52987 1.54440 1.56983 1.80329 1.98967 2.12380 2.38587 3.16728 3.21302 3.25241 3.43199 3.50655 3.57161 3.77491 3.97784 4.12909 4.15452 4.15835 4.19678 4.25571 4.39575 4.47101 4.54509 4.59195 4.67513 4.71263 4.77991 4.86427 4.98660 5.07530 5.13803 5.28531 5.57195 5.80961 6.16348 6.20365 6.39337 7.10639 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.252 6.252 3 C -0.084 4.084 4 H 0.106 0.894 5 C -0.099 4.099 6 C -0.122 4.122 7 H 0.100 0.900 8 C 0.132 3.868 9 N -0.731 5.731 10 C 0.589 3.411 11 O -0.523 6.523 12 C -0.050 4.050 13 C -0.098 4.098 14 C -0.199 4.199 15 C 0.023 3.977 16 C -0.062 4.062 17 O -0.535 6.535 18 Si 0.719 3.281 19 N -0.524 5.524 20 C -0.123 4.123 21 H 0.101 0.899 22 H 0.076 0.924 23 H 0.077 0.923 24 H 0.097 0.903 25 H 0.083 0.917 26 H 0.075 0.925 27 H 0.076 0.924 28 H 0.394 0.606 29 H 0.153 0.847 30 H 0.151 0.849 31 H 0.119 0.881 32 H 0.381 0.619 33 H -0.256 1.256 34 H -0.255 1.255 35 H 0.416 0.584 36 H 0.072 0.928 37 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.109 2.056 -0.310 4.605 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.023 6.023 3 C -0.213 4.213 4 H 0.124 0.876 5 C -0.139 4.139 6 C -0.143 4.143 7 H 0.118 0.882 8 C 0.008 3.992 9 N -0.383 5.383 10 C 0.376 3.624 11 O -0.398 6.398 12 C -0.163 4.163 13 C -0.124 4.124 14 C -0.224 4.224 15 C -0.095 4.095 16 C -0.171 4.171 17 O -0.341 6.341 18 Si 0.617 3.383 19 N -0.120 5.120 20 C -0.163 4.163 21 H 0.120 0.880 22 H 0.095 0.905 23 H 0.096 0.904 24 H 0.115 0.885 25 H 0.102 0.898 26 H 0.093 0.907 27 H 0.094 0.906 28 H 0.227 0.773 29 H 0.171 0.829 30 H 0.168 0.832 31 H 0.137 0.863 32 H 0.229 0.771 33 H -0.181 1.181 34 H -0.179 1.179 35 H 0.253 0.747 36 H 0.091 0.909 37 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -3.210 1.160 -0.570 3.461 hybrid contribution -1.311 1.560 1.632 2.610 sum -4.522 2.720 1.062 5.382 Atomic orbital electron populations 1.23376 0.94137 1.06674 1.04916 1.87006 1.07547 1.10153 1.97607 1.24713 1.01064 0.94440 1.01108 0.87621 1.22757 0.93393 0.97856 0.99858 1.22764 0.95726 0.98973 0.96796 0.88208 1.21405 0.98259 0.88287 0.91222 1.45872 1.27502 1.30701 1.34230 1.17053 0.82729 0.83176 0.79417 1.90886 1.28693 1.49983 1.70268 1.20472 0.94136 0.96953 1.04781 1.21344 0.99899 0.96429 0.94776 1.20744 0.96860 1.00943 1.03805 1.21084 0.99802 0.94485 0.94132 1.24902 1.02244 0.90277 0.99655 1.86595 1.36535 1.63016 1.47961 0.94208 0.79763 0.82312 0.81989 1.41948 1.20962 1.21417 1.27714 1.23474 0.97981 0.99129 0.95719 0.88015 0.90499 0.90437 0.88488 0.89836 0.90698 0.90555 0.77258 0.82913 0.83152 0.86327 0.77115 1.18065 1.17874 0.74697 0.90939 0.88312 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.16 10.76 101.05 1.09 1.25 16 2 S -0.25 -0.19 22.18 -107.50 -2.38 -2.58 16 3 C -0.08 0.13 4.29 -25.77 -0.11 0.02 16 4 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 5 C -0.10 0.20 7.22 -25.92 -0.19 0.01 16 6 C -0.12 0.36 3.76 -89.81 -0.34 0.03 16 7 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 8 C 0.13 -0.13 5.51 -4.04 -0.02 -0.16 16 9 N -0.73 0.72 5.55 -61.62 -0.34 0.38 16 10 C 0.59 1.41 7.79 -12.85 -0.10 1.31 16 11 O -0.52 -3.34 16.88 5.19 0.09 -3.25 16 12 C -0.05 -0.06 7.06 -81.98 -0.58 -0.64 16 13 C -0.10 -0.15 10.65 -39.12 -0.42 -0.57 16 14 C -0.20 0.04 9.32 -39.98 -0.37 -0.33 16 15 C 0.02 -0.02 6.46 -81.95 -0.53 -0.55 16 16 C -0.06 0.12 3.08 36.01 0.11 0.23 16 17 O -0.53 0.36 12.88 -35.23 -0.45 -0.10 16 18 Si 0.72 -1.74 30.56 -169.99 -5.19 -6.93 16 19 N -0.52 0.64 5.99 -5.70 -0.03 0.61 16 20 C -0.12 0.31 7.23 -25.78 -0.19 0.12 16 21 H 0.10 -0.17 8.14 -51.92 -0.42 -0.59 16 22 H 0.08 -0.15 8.14 -51.92 -0.42 -0.57 16 23 H 0.08 -0.15 8.14 -51.92 -0.42 -0.57 16 24 H 0.10 -0.11 8.06 -51.93 -0.42 -0.53 16 25 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 26 H 0.07 0.00 8.14 -51.93 -0.42 -0.43 16 27 H 0.08 0.01 7.84 -51.93 -0.41 -0.40 16 28 H 0.39 -1.45 7.60 -40.82 -0.31 -1.76 16 29 H 0.15 0.21 8.06 -52.49 -0.42 -0.22 16 30 H 0.15 -0.30 6.19 -52.48 -0.32 -0.63 16 31 H 0.12 -0.36 7.96 -51.93 -0.41 -0.78 16 32 H 0.38 -1.16 8.70 45.56 0.40 -0.76 16 33 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 34 H -0.25 0.07 7.11 56.52 0.40 0.47 16 35 H 0.42 -1.50 8.19 -40.82 -0.33 -1.84 16 36 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 37 H 0.10 -0.13 7.86 -51.93 -0.41 -0.54 16 LS Contribution 326.99 15.07 4.93 4.93 Total: 0.00 -7.65 326.99 -10.26 -17.91 By element: Atomic # 1 Polarization: -6.47 SS G_CDS: -5.22 Total: -11.70 kcal Atomic # 6 Polarization: 2.37 SS G_CDS: -1.64 Total: 0.73 kcal Atomic # 7 Polarization: 1.36 SS G_CDS: -0.38 Total: 0.99 kcal Atomic # 8 Polarization: -2.98 SS G_CDS: -0.37 Total: -3.35 kcal Atomic # 14 Polarization: -1.74 SS G_CDS: -5.19 Total: -6.93 kcal Atomic # 16 Polarization: -0.19 SS G_CDS: -2.38 Total: -2.58 kcal Total LS contribution 4.93 Total: 4.93 kcal Total: -7.65 -10.26 -17.91 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18360570_6580494.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.811 kcal (2) G-P(sol) polarization free energy of solvation -7.649 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.162 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.260 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.909 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.902 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds