Wall clock time and date at job start Tue Mar 9 2021 12:59:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81400 * 1 3 3 C 1.81396 * 103.00067 * 2 1 4 4 H 1.09000 * 112.90991 * 43.75060 * 3 2 1 5 5 C 1.53786 * 113.61571 * 174.99869 * 3 2 1 6 6 C 1.53781 * 87.17350 * 140.02404 * 5 3 2 7 7 H 1.08999 * 113.61567 * 89.07405 * 6 5 3 8 8 C 1.52991 * 113.61529 * 219.97788 * 6 5 3 9 9 N 1.46508 * 109.47429 * 184.99923 * 8 6 5 10 10 C 1.34777 * 120.00013 * 180.02562 * 9 8 6 11 11 O 1.21698 * 119.99818 * 359.97438 * 10 9 8 12 12 C 1.46677 * 119.99665 * 180.02562 * 10 9 8 13 13 C 1.37867 * 126.22983 * 180.02562 * 12 10 9 14 14 C 1.39837 * 107.08265 * 179.97438 * 13 12 10 15 15 C 1.35454 * 107.86561 * 0.02562 * 14 13 12 16 16 C 1.50700 * 125.56321 * 179.97438 * 15 14 13 17 17 O 1.42910 * 109.46836 * 245.02643 * 16 15 14 18 18 Si 1.86300 * 109.47425 * 5.02092 * 16 15 14 19 19 N 1.35533 * 108.87253 * 359.76734 * 15 14 13 20 20 C 1.53781 * 87.08070 * 334.52830 * 6 5 3 21 21 H 1.08999 * 109.47388 * 180.02562 * 1 2 3 22 22 H 1.09000 * 109.46955 * 300.00272 * 1 2 3 23 23 H 1.09004 * 109.46830 * 59.99795 * 1 2 3 24 24 H 1.09002 * 113.61357 * 25.43320 * 5 3 2 25 25 H 1.09002 * 113.61608 * 254.61482 * 5 3 2 26 26 H 1.08997 * 109.47550 * 304.99814 * 8 6 5 27 27 H 1.09002 * 109.47334 * 65.00084 * 8 6 5 28 28 H 0.96996 * 119.99136 * 0.02562 * 9 8 6 29 29 H 1.08001 * 126.46307 * 359.97438 * 13 12 10 30 30 H 1.08005 * 126.06939 * 180.02562 * 14 13 12 31 31 H 1.08994 * 109.47476 * 125.02762 * 16 15 14 32 32 H 0.96692 * 113.99959 * 59.99665 * 17 16 15 33 33 H 1.48497 * 110.00292 * 180.02562 * 18 16 15 34 34 H 1.48506 * 110.00019 * 301.32370 * 18 16 15 35 35 H 0.96997 * 125.67982 * 180.26461 * 19 15 14 36 36 H 1.09005 * 113.61471 * 139.98321 * 20 6 5 37 37 H 1.09003 * 113.61469 * 270.88099 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7675 0.0000 4 1 1.6109 2.3441 0.6943 5 6 3.7284 2.0520 0.1228 6 6 3.5229 3.1750 -0.9074 7 1 3.2666 4.1357 -0.4607 8 6 4.6516 3.2783 -1.9349 9 7 4.4259 4.4441 -2.7930 10 6 5.2989 4.7352 -3.7777 11 8 6.2748 4.0298 -3.9538 12 6 5.0731 5.9027 -4.6364 13 6 5.8780 6.3173 -5.6761 14 6 5.2907 7.4650 -6.2178 15 6 4.1627 7.7259 -5.5146 16 6 3.2213 8.8761 -5.7633 17 8 3.2381 9.7572 -4.6383 18 14 3.7620 9.8032 -7.2861 19 7 4.0166 6.7812 -4.5539 20 6 2.3033 2.3842 -1.4093 21 1 -0.3634 -1.0276 0.0005 22 1 -0.3633 0.5139 0.8900 23 1 -0.3633 0.5139 -0.8900 24 1 4.3573 1.2381 -0.2381 25 1 4.0259 2.4120 1.1077 26 1 5.6050 3.3869 -1.4178 27 1 4.6705 2.3757 -2.5458 28 1 3.6482 5.0064 -2.6522 29 1 6.7901 5.8448 -6.0096 30 1 5.6693 8.0411 -7.0492 31 1 2.2113 8.4937 -5.9103 32 1 4.1072 10.1358 -4.4482 33 1 2.8419 10.9404 -7.5419 34 1 5.1495 10.3026 -7.1108 35 1 3.2893 6.7330 -3.9139 36 1 1.4488 3.0125 -1.6610 37 1 2.5425 1.6611 -2.1892 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18360570_6580494.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:37 Heat of formation + Delta-G solvation = 1.250374 kcal Electronic energy + Delta-G solvation = -19475.374349 eV Core-core repulsion = 16346.962474 eV Total energy + Delta-G solvation = -3128.411875 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.103 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -42.52800 -40.68187 -39.62027 -37.81880 -35.72287 -32.28583 -31.56827 -29.96438 -29.43637 -26.81152 -26.66442 -24.34099 -22.96077 -21.53884 -21.34108 -20.67847 -19.77353 -18.26225 -17.61560 -17.02337 -16.85277 -16.55167 -16.29131 -16.08405 -15.38630 -15.14719 -15.07476 -14.99037 -14.49361 -14.37315 -14.12616 -14.08219 -13.96644 -13.63713 -13.53884 -13.50026 -12.84918 -12.33655 -12.00129 -11.89832 -11.83794 -11.40732 -11.32766 -10.84215 -10.80341 -10.32738 -10.07740 -9.29191 -8.73571 -4.82072 0.28943 0.75224 1.23245 1.54333 1.61884 1.70363 1.89313 1.99957 2.21953 2.26527 3.34479 3.36227 3.39820 3.57729 3.60460 3.73977 3.82540 4.10163 4.25424 4.28222 4.29323 4.30054 4.32460 4.51482 4.57403 4.70446 4.72210 4.78286 4.83798 4.91708 4.95726 4.99227 5.11213 5.19699 5.38607 5.57676 5.78374 6.26869 6.40781 6.44915 7.01717 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.110 4.110 2 S -0.318 6.318 3 C -0.073 4.073 4 H 0.118 0.882 5 C -0.103 4.103 6 C -0.105 4.105 7 H 0.122 0.878 8 C 0.133 3.867 9 N -0.713 5.713 10 C 0.586 3.414 11 O -0.573 6.573 12 C -0.062 4.062 13 C -0.119 4.119 14 C -0.206 4.206 15 C 0.033 3.967 16 C -0.062 4.062 17 O -0.548 6.548 18 Si 0.793 3.207 19 N -0.511 5.511 20 C -0.118 4.118 21 H 0.102 0.898 22 H 0.085 0.915 23 H 0.085 0.915 24 H 0.083 0.917 25 H 0.091 0.909 26 H 0.065 0.935 27 H 0.061 0.939 28 H 0.410 0.590 29 H 0.145 0.855 30 H 0.166 0.834 31 H 0.136 0.864 32 H 0.390 0.610 33 H -0.299 1.299 34 H -0.283 1.283 35 H 0.428 0.572 36 H 0.089 0.911 37 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.652 3.253 0.012 6.521 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.278 4.278 2 S -0.090 6.090 3 C -0.201 4.201 4 H 0.137 0.863 5 C -0.143 4.143 6 C -0.125 4.125 7 H 0.140 0.860 8 C 0.009 3.991 9 N -0.365 5.365 10 C 0.375 3.625 11 O -0.452 6.452 12 C -0.176 4.176 13 C -0.146 4.146 14 C -0.230 4.230 15 C -0.086 4.086 16 C -0.171 4.171 17 O -0.356 6.356 18 Si 0.696 3.304 19 N -0.108 5.108 20 C -0.158 4.158 21 H 0.121 0.879 22 H 0.104 0.896 23 H 0.104 0.896 24 H 0.101 0.899 25 H 0.110 0.890 26 H 0.083 0.917 27 H 0.079 0.921 28 H 0.246 0.754 29 H 0.162 0.838 30 H 0.183 0.817 31 H 0.153 0.847 32 H 0.239 0.761 33 H -0.227 1.227 34 H -0.209 1.209 35 H 0.268 0.732 36 H 0.107 0.893 37 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges -4.801 2.351 -0.213 5.350 hybrid contribution -0.848 1.245 1.533 2.149 sum -5.649 3.597 1.320 6.825 Atomic orbital electron populations 1.23371 0.91695 1.07053 1.05728 1.87239 1.10455 1.13499 1.97771 1.24775 1.01198 0.92189 1.01965 0.86350 1.22782 0.93141 0.97829 1.00506 1.22676 0.94511 0.99587 0.95701 0.86008 1.21374 0.98786 0.87617 0.91312 1.45727 1.27234 1.30534 1.33002 1.17265 0.82411 0.83067 0.79804 1.90855 1.30860 1.51723 1.71796 1.20279 0.95145 0.97263 1.04939 1.21491 1.00164 0.97400 0.95520 1.20945 0.97043 1.00548 1.04427 1.21253 0.99485 0.94338 0.93525 1.25047 1.02956 0.89694 0.99355 1.86577 1.37541 1.63184 1.48339 0.93282 0.76262 0.80121 0.80693 1.41880 1.20590 1.20604 1.27757 1.23412 0.98647 0.98899 0.94846 0.87929 0.89618 0.89593 0.89876 0.89040 0.91706 0.92068 0.75361 0.83768 0.81694 0.84654 0.76052 1.22674 1.20889 0.73199 0.89269 0.89758 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.33 10.76 113.37 1.22 1.55 16 2 S -0.32 -0.71 22.18 -56.49 -1.25 -1.96 16 3 C -0.07 0.27 4.29 31.21 0.13 0.40 16 4 H 0.12 -0.71 8.14 -2.39 -0.02 -0.73 16 5 C -0.10 0.42 7.22 31.12 0.22 0.64 16 6 C -0.10 0.71 3.76 -10.27 -0.04 0.67 16 7 H 0.12 -1.29 8.14 -2.39 -0.02 -1.31 16 8 C 0.13 -0.20 5.51 86.37 0.48 0.27 16 9 N -0.71 1.48 5.55 -467.07 -2.59 -1.11 16 10 C 0.59 3.36 7.79 86.45 0.67 4.03 16 11 O -0.57 -8.57 16.88 -4.34 -0.07 -8.64 16 12 C -0.06 -0.17 7.06 40.35 0.28 0.11 16 13 C -0.12 -0.46 10.65 22.57 0.24 -0.22 16 14 C -0.21 0.17 9.32 22.01 0.21 0.37 16 15 C 0.03 -0.10 6.46 41.34 0.27 0.16 16 16 C -0.06 0.35 3.08 71.24 0.22 0.57 16 17 O -0.55 1.56 12.88 -148.98 -1.92 -0.36 16 18 Si 0.79 -4.38 30.56 68.60 2.10 -2.28 16 19 N -0.51 1.79 5.99 -171.93 -1.03 0.76 16 20 C -0.12 0.68 7.23 31.21 0.23 0.90 16 21 H 0.10 -0.34 8.14 -2.39 -0.02 -0.36 16 22 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 23 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 24 H 0.08 -0.08 8.06 -2.39 -0.02 -0.10 16 25 H 0.09 -0.50 8.14 -2.39 -0.02 -0.52 16 26 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 27 H 0.06 0.12 7.84 -2.39 -0.02 0.10 16 28 H 0.41 -3.59 7.60 -92.71 -0.70 -4.29 16 29 H 0.14 0.69 8.06 -2.91 -0.02 0.67 16 30 H 0.17 -0.76 6.19 -2.91 -0.02 -0.78 16 31 H 0.14 -1.16 7.96 -2.39 -0.02 -1.18 16 32 H 0.39 -2.84 8.70 -74.06 -0.64 -3.48 16 33 H -0.30 -0.57 7.11 99.48 0.71 0.14 16 34 H -0.28 0.22 7.11 99.48 0.71 0.93 16 35 H 0.43 -3.88 8.19 -92.71 -0.76 -4.64 16 36 H 0.09 -0.77 8.14 -2.38 -0.02 -0.79 16 37 H 0.08 -0.19 7.86 -2.39 -0.02 -0.20 16 Total: 0.00 -19.86 326.99 -1.61 -21.47 By element: Atomic # 1 Polarization: -16.37 SS G_CDS: -0.97 Total: -17.34 kcal Atomic # 6 Polarization: 5.34 SS G_CDS: 4.13 Total: 9.47 kcal Atomic # 7 Polarization: 3.27 SS G_CDS: -3.62 Total: -0.35 kcal Atomic # 8 Polarization: -7.01 SS G_CDS: -1.99 Total: -9.00 kcal Atomic # 14 Polarization: -4.38 SS G_CDS: 2.10 Total: -2.28 kcal Atomic # 16 Polarization: -0.71 SS G_CDS: -1.25 Total: -1.96 kcal Total: -19.86 -1.61 -21.47 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18360570_6580494.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.717 kcal (2) G-P(sol) polarization free energy of solvation -19.859 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.859 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.608 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.467 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.250 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds