Wall clock time and date at job start Tue Mar 9 2021 13:44:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.34657 * 124.85063 * 2 1 4 4 C 1.36772 * 108.40053 * 180.02562 * 3 2 1 5 5 C 1.47252 * 126.94811 * 180.02562 * 4 3 2 6 6 O 1.21622 * 120.00559 * 179.97438 * 5 4 3 7 7 N 1.34777 * 119.99890 * 359.97438 * 5 4 3 8 8 C 1.47065 * 136.05665 * 359.62337 * 7 5 4 9 9 C 1.53758 * 87.89050 * 152.96637 * 8 7 5 10 10 O 1.42901 * 114.08938 * 139.77751 * 9 8 7 11 11 Si 1.63091 * 114.00082 * 116.56427 * 10 9 8 12 12 C 1.86300 * 109.47128 * 300.00096 * 11 10 9 13 13 C 1.86300 * 109.47154 * 59.99855 * 11 10 9 14 14 C 1.86294 * 109.47505 * 180.02562 * 11 10 9 15 15 C 1.53002 * 109.47392 * 59.99691 * 14 11 10 16 16 C 1.53001 * 109.47620 * 180.02562 * 14 11 10 17 17 C 1.53009 * 109.46989 * 300.00061 * 14 11 10 18 18 C 1.47075 * 136.06053 * 180.02562 * 7 5 4 19 19 C 1.46690 * 106.11185 * 0.02562 * 4 3 2 20 20 C 1.34485 * 106.33515 * 359.97438 * 19 4 3 21 21 C 1.50697 * 125.57502 * 179.73678 * 20 19 4 22 22 O 1.42902 * 109.47403 * 150.02683 * 21 20 19 23 23 Si 1.86291 * 109.47321 * 30.02237 * 21 20 19 24 24 H 1.48500 * 109.47102 * 60.00059 * 23 21 20 25 25 H 1.48500 * 109.47493 * 180.02562 * 23 21 20 26 26 H 1.48497 * 109.47157 * 300.00372 * 23 21 20 27 27 H 1.08993 * 109.47238 * 269.97976 * 1 2 3 28 28 H 1.09003 * 109.46968 * 29.97508 * 1 2 3 29 29 H 1.08998 * 109.46977 * 149.97404 * 1 2 3 30 30 H 1.08005 * 125.80427 * 0.02562 * 3 2 1 31 31 H 1.09003 * 113.46763 * 267.69493 * 8 7 5 32 32 H 1.08993 * 113.46902 * 38.14033 * 8 7 5 33 33 H 1.08995 * 114.39783 * 272.67987 * 9 8 7 34 34 H 1.09002 * 109.47303 * 59.99848 * 12 11 10 35 35 H 1.08996 * 109.47424 * 179.97438 * 12 11 10 36 36 H 1.09005 * 109.47414 * 299.99891 * 12 11 10 37 37 H 1.09005 * 109.47025 * 60.00486 * 13 11 10 38 38 H 1.09003 * 109.46931 * 180.02562 * 13 11 10 39 39 H 1.08992 * 109.47560 * 300.00189 * 13 11 10 40 40 H 1.08996 * 109.46890 * 60.00062 * 15 14 11 41 41 H 1.09002 * 109.47155 * 180.02562 * 15 14 11 42 42 H 1.09003 * 109.46824 * 300.00564 * 15 14 11 43 43 H 1.08999 * 109.47068 * 59.99519 * 16 14 11 44 44 H 1.09001 * 109.47385 * 180.02562 * 16 14 11 45 45 H 1.08996 * 109.46751 * 299.99992 * 16 14 11 46 46 H 1.08996 * 109.47342 * 59.99818 * 17 14 11 47 47 H 1.08997 * 109.46976 * 180.02562 * 17 14 11 48 48 H 1.08999 * 109.46810 * 299.99937 * 17 14 11 49 49 H 1.09003 * 113.46245 * 321.86535 * 18 7 5 50 50 H 1.09002 * 113.46664 * 92.23625 * 18 7 5 51 51 H 1.07996 * 126.83585 * 180.02562 * 19 4 3 52 52 H 1.09007 * 109.47135 * 270.02211 * 21 20 19 53 53 H 0.96700 * 113.99660 * 299.99761 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2344 1.1051 0.0000 4 6 3.5462 0.7177 -0.0006 5 6 4.7283 1.5957 -0.0003 6 8 5.8446 1.1129 -0.0004 7 7 4.5733 2.9346 0.0002 8 6 3.4378 3.8691 -0.0063 9 6 4.3466 4.8892 0.6992 10 8 4.1917 6.2303 0.2308 11 14 3.6375 7.2677 1.3607 12 6 1.9681 6.6986 1.9607 13 6 4.8275 7.3197 2.7931 14 6 3.4829 8.9696 0.6188 15 6 2.5053 8.9265 -0.5573 16 6 2.9636 9.9429 1.6789 17 6 4.8537 9.4373 0.1256 18 6 5.4653 4.1039 0.0001 19 6 3.5375 -0.7491 -0.0016 20 6 2.2448 -1.1197 -0.0009 21 6 1.7398 -2.5396 -0.0072 22 8 0.4818 -2.6008 0.6680 23 14 2.9662 -3.6387 0.8636 24 1 3.1342 -3.1793 2.2657 25 1 2.4689 -5.0380 0.8569 26 1 4.2733 -3.5751 0.1618 27 1 -0.3633 -0.0004 1.0276 28 1 -0.3633 0.8902 -0.5135 29 1 -0.3633 -0.8897 -0.5142 30 1 1.8767 2.1241 0.0004 31 1 3.1348 4.1771 -1.0070 32 1 2.5990 3.5371 0.6053 33 1 4.3554 4.8083 1.7861 34 1 2.0580 5.7028 2.3947 35 1 1.5978 7.3916 2.7161 36 1 1.2717 6.6682 1.1226 37 1 5.8043 7.6527 2.4420 38 1 4.4568 8.0127 3.5484 39 1 4.9175 6.3240 3.2271 40 1 1.5288 8.5932 -0.2060 41 1 2.4152 9.9222 -0.9916 42 1 2.8757 8.2331 -1.3124 43 1 3.6604 9.9735 2.5165 44 1 2.8728 10.9386 1.2447 45 1 1.9872 9.6099 2.0307 46 1 5.2242 8.7441 -0.6295 47 1 4.7634 10.4332 -0.3080 48 1 5.5502 9.4680 0.9635 49 1 6.3541 3.9718 0.6172 50 1 5.6972 4.4730 -0.9990 51 1 4.3980 -1.4017 -0.0018 52 1 1.6164 -2.8768 -1.0364 53 1 0.5166 -2.3144 1.5910 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18362370_13287730.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:44:44 Heat of formation + Delta-G solvation = -69.436333 kcal Electronic energy + Delta-G solvation = -30257.938504 eV Core-core repulsion = 26255.571166 eV Total energy + Delta-G solvation = -4002.367338 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 354.193 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.52370 -41.26948 -38.86684 -37.83676 -36.91688 -36.49872 -33.83145 -31.83693 -29.91431 -29.44141 -29.18863 -27.93828 -27.64121 -27.46530 -27.17395 -26.00323 -23.92154 -22.03911 -20.78343 -20.47136 -20.14342 -18.86556 -18.48775 -17.57946 -17.22583 -16.86305 -16.42010 -16.17008 -16.07874 -15.73782 -15.61685 -15.23981 -15.07059 -14.90595 -14.86779 -14.75163 -14.53136 -14.26566 -14.09159 -13.85951 -13.67021 -13.53099 -13.49050 -13.36654 -13.33787 -13.27322 -13.05653 -13.00484 -12.98613 -12.88566 -12.47141 -12.41330 -12.02450 -11.93239 -11.85832 -11.77980 -11.59616 -11.36634 -10.82162 -10.81475 -10.43995 -10.16380 -9.77983 -9.53891 -9.22487 0.74521 0.94381 1.17305 1.35822 1.49103 1.53182 1.62636 1.80416 1.91593 1.94284 2.03590 2.32073 2.68313 3.15429 3.17156 3.44924 3.59598 3.68172 3.71222 3.90930 4.04369 4.04658 4.06616 4.13588 4.21573 4.36369 4.38495 4.43566 4.44824 4.50522 4.53080 4.57155 4.63039 4.64069 4.65351 4.68725 4.72154 4.74351 4.78858 4.92985 4.96581 5.03597 5.04132 5.05138 5.12528 5.27167 5.33369 5.35514 5.43850 5.45034 5.51713 5.68540 5.95118 6.13235 6.30598 6.76568 7.39098 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.066 3.934 2 N -0.425 5.425 3 C 0.048 3.952 4 C -0.222 4.222 5 C 0.625 3.375 6 O -0.536 6.536 7 N -0.646 5.646 8 C 0.078 3.922 9 C 0.077 3.923 10 O -0.605 6.605 11 Si 1.286 2.714 12 C -0.510 4.510 13 C -0.512 4.512 14 C -0.375 4.375 15 C -0.134 4.134 16 C -0.137 4.137 17 C -0.135 4.135 18 C 0.105 3.895 19 C -0.140 4.140 20 C -0.020 4.020 21 C -0.056 4.056 22 O -0.543 6.543 23 Si 0.969 3.031 24 H -0.250 1.250 25 H -0.251 1.251 26 H -0.245 1.245 27 H 0.077 0.923 28 H 0.081 0.919 29 H 0.101 0.899 30 H 0.174 0.826 31 H 0.101 0.899 32 H 0.082 0.918 33 H 0.103 0.897 34 H 0.066 0.934 35 H 0.075 0.925 36 H 0.073 0.927 37 H 0.074 0.926 38 H 0.075 0.925 39 H 0.066 0.934 40 H 0.054 0.946 41 H 0.053 0.947 42 H 0.060 0.940 43 H 0.056 0.944 44 H 0.056 0.944 45 H 0.056 0.944 46 H 0.060 0.940 47 H 0.053 0.947 48 H 0.054 0.946 49 H 0.085 0.915 50 H 0.098 0.902 51 H 0.153 0.847 52 H 0.123 0.877 53 H 0.377 0.623 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.859 2.407 1.500 6.509 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.100 5.100 3 C -0.088 4.088 4 C -0.232 4.232 5 C 0.418 3.582 6 O -0.413 6.413 7 N -0.384 5.384 8 C -0.046 4.046 9 C 0.019 3.981 10 O -0.562 6.562 11 Si 1.417 2.583 12 C -0.612 4.612 13 C -0.614 4.614 14 C -0.418 4.418 15 C -0.191 4.191 16 C -0.194 4.194 17 C -0.192 4.192 18 C -0.018 4.018 19 C -0.164 4.164 20 C -0.129 4.129 21 C -0.166 4.166 22 O -0.348 6.348 23 Si 0.789 3.211 24 H -0.173 1.173 25 H -0.174 1.174 26 H -0.168 1.168 27 H 0.095 0.905 28 H 0.100 0.900 29 H 0.120 0.880 30 H 0.191 0.809 31 H 0.119 0.881 32 H 0.100 0.900 33 H 0.121 0.879 34 H 0.085 0.915 35 H 0.094 0.906 36 H 0.092 0.908 37 H 0.093 0.907 38 H 0.094 0.906 39 H 0.085 0.915 40 H 0.073 0.927 41 H 0.072 0.928 42 H 0.079 0.921 43 H 0.075 0.925 44 H 0.075 0.925 45 H 0.075 0.925 46 H 0.079 0.921 47 H 0.072 0.928 48 H 0.073 0.927 49 H 0.104 0.896 50 H 0.116 0.884 51 H 0.171 0.829 52 H 0.140 0.860 53 H 0.225 0.775 Dipole moment (debyes) X Y Z Total from point charges -5.119 1.087 1.061 5.340 hybrid contribution -0.460 1.057 0.600 1.299 sum -5.580 2.143 1.661 6.204 Atomic orbital electron populations 1.22277 0.76109 1.05206 1.03955 1.43514 1.07078 1.04894 1.54509 1.22265 0.90201 0.91885 1.04463 1.20151 0.91294 0.93601 1.18137 1.16807 0.88093 0.78332 0.75018 1.90809 1.26110 1.73512 1.50892 1.49010 1.11046 1.03338 1.75016 1.23753 0.91686 0.86844 1.02286 1.23374 0.97173 0.80149 0.97421 1.85430 1.85865 1.23873 1.61048 0.76778 0.63504 0.60902 0.57067 1.27057 1.21108 1.06115 1.06931 1.27060 1.13076 1.04522 1.16755 1.25791 0.98493 1.15958 1.01588 1.21517 0.98187 1.02174 0.97260 1.21559 1.00665 0.99291 0.97924 1.21522 0.95101 1.01505 1.01089 1.23227 0.94980 0.81419 1.02169 1.21740 0.95089 0.93141 1.06407 1.20821 0.90528 0.89264 1.12302 1.24767 0.93751 0.94531 1.03518 1.86485 1.29819 1.89622 1.28837 0.85421 0.77355 0.78161 0.80164 1.17267 1.17449 1.16827 0.90490 0.90035 0.87996 0.80910 0.88125 0.90005 0.87922 0.91478 0.90611 0.90763 0.90666 0.90616 0.91453 0.92702 0.92766 0.92120 0.92487 0.92454 0.92521 0.92075 0.92758 0.92656 0.89627 0.88353 0.82927 0.85973 0.77527 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.23 9.82 59.84 0.59 0.36 16 2 N -0.43 0.21 3.09 -119.90 -0.37 -0.16 16 3 C 0.05 0.00 10.51 -16.84 -0.18 -0.18 16 4 C -0.22 -0.69 6.29 -103.35 -0.65 -1.34 16 5 C 0.62 3.07 8.06 -12.60 -0.10 2.97 16 6 O -0.54 -4.80 17.75 5.26 0.09 -4.71 16 7 N -0.65 -1.04 3.69 -186.40 -0.69 -1.73 16 8 C 0.08 -0.16 6.99 -8.37 -0.06 -0.21 16 9 C 0.08 -0.14 3.92 -26.07 -0.10 -0.24 16 10 O -0.60 1.00 8.61 -35.23 -0.30 0.69 16 11 Si 1.29 -3.33 8.24 -169.99 -1.40 -4.73 16 12 C -0.51 1.34 8.65 101.05 0.87 2.22 16 13 C -0.51 0.88 8.64 101.05 0.87 1.75 16 14 C -0.37 0.57 0.53 -90.61 -0.05 0.52 16 15 C -0.13 0.17 7.85 37.16 0.29 0.46 16 16 C -0.14 0.22 7.85 37.16 0.29 0.51 16 17 C -0.14 0.12 7.85 37.16 0.29 0.41 16 18 C 0.10 0.02 8.45 -8.49 -0.07 -0.05 16 19 C -0.14 -0.40 9.50 -37.50 -0.36 -0.76 16 20 C -0.02 -0.01 6.13 -81.87 -0.50 -0.52 16 21 C -0.06 0.07 2.86 36.00 0.10 0.17 16 22 O -0.54 0.98 10.33 -35.23 -0.36 0.62 16 23 Si 0.97 -0.62 26.56 -169.99 -4.51 -5.13 16 24 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 25 H -0.25 -0.07 7.11 56.52 0.40 0.33 16 26 H -0.25 -0.13 6.81 56.52 0.38 0.26 16 27 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 28 H 0.08 -0.40 8.13 -51.93 -0.42 -0.82 16 29 H 0.10 -0.30 6.72 -51.93 -0.35 -0.65 16 30 H 0.17 -0.51 5.17 -52.48 -0.27 -0.78 16 31 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 32 H 0.08 -0.32 6.17 -51.93 -0.32 -0.65 16 33 H 0.10 -0.32 6.50 -51.93 -0.34 -0.66 16 34 H 0.07 -0.20 7.96 -51.93 -0.41 -0.62 16 35 H 0.07 -0.19 7.79 -51.93 -0.40 -0.60 16 36 H 0.07 -0.20 7.79 -51.93 -0.40 -0.61 16 37 H 0.07 -0.10 7.79 -51.93 -0.40 -0.50 16 38 H 0.07 -0.14 7.79 -51.93 -0.40 -0.55 16 39 H 0.07 -0.13 7.31 -51.93 -0.38 -0.51 16 40 H 0.05 -0.11 7.79 -51.93 -0.40 -0.51 16 41 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 42 H 0.06 -0.08 7.97 -51.93 -0.41 -0.49 16 43 H 0.06 -0.12 7.79 -51.93 -0.40 -0.52 16 44 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 45 H 0.06 -0.13 7.79 -51.93 -0.40 -0.53 16 46 H 0.06 -0.05 7.96 -51.93 -0.41 -0.46 16 47 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 48 H 0.05 -0.07 7.80 -51.93 -0.40 -0.48 16 49 H 0.09 0.03 8.14 -51.93 -0.42 -0.39 16 50 H 0.10 -0.02 8.14 -51.93 -0.42 -0.45 16 51 H 0.15 0.45 6.69 -52.49 -0.35 0.10 16 52 H 0.12 -0.24 7.96 -51.92 -0.41 -0.65 16 53 H 0.38 -1.68 8.70 45.56 0.40 -1.29 16 LS Contribution 419.74 15.07 6.33 6.33 Total: 0.00 -8.62 419.74 -8.67 -17.29 By element: Atomic # 1 Polarization: -5.87 SS G_CDS: -8.70 Total: -14.57 kcal Atomic # 6 Polarization: 4.84 SS G_CDS: 1.24 Total: 6.08 kcal Atomic # 7 Polarization: -0.83 SS G_CDS: -1.06 Total: -1.89 kcal Atomic # 8 Polarization: -2.82 SS G_CDS: -0.57 Total: -3.39 kcal Atomic # 14 Polarization: -3.94 SS G_CDS: -5.92 Total: -9.86 kcal Total LS contribution 6.33 Total: 6.33 kcal Total: -8.62 -8.67 -17.29 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18362370_13287730.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.145 kcal (2) G-P(sol) polarization free energy of solvation -8.617 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.763 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.674 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.291 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.436 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds