Wall clock time and date at job start Tue Mar 9 2021 14:17:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34231 * 116.99688 * 2 1 4 4 O 1.20830 * 119.99926 * 0.02562 * 3 2 1 5 5 C 1.50693 * 120.00074 * 180.02562 * 3 2 1 6 6 N 1.46500 * 112.84965 * 335.49209 * 5 3 2 7 7 C 1.34771 * 120.00264 * 293.59620 * 6 5 3 8 8 O 1.21571 * 119.99876 * 5.02029 * 7 6 5 9 9 C 1.47690 * 120.00279 * 185.02774 * 7 6 5 10 10 C 1.39826 * 120.16771 * 179.71895 * 9 7 6 11 11 F 1.35095 * 120.11354 * 359.97438 * 10 9 7 12 12 C 1.38322 * 119.77613 * 179.76542 * 10 9 7 13 13 C 1.38202 * 120.11942 * 0.48649 * 12 10 9 14 14 C 1.38452 * 120.34027 * 359.79147 * 13 12 10 15 15 C 1.50700 * 119.89398 * 179.97438 * 14 13 12 16 16 O 1.42895 * 109.47479 * 119.97628 * 15 14 13 17 17 Si 1.86300 * 109.46926 * 359.97430 * 15 14 13 18 18 C 1.37863 * 120.21692 * 359.95054 * 14 13 12 19 19 C 1.53781 * 113.61446 * 204.30054 * 5 3 2 20 20 C 1.53780 * 87.07928 * 220.01770 * 19 5 3 21 21 O 1.42904 * 113.61349 * 270.79629 * 20 19 5 22 22 C 1.53010 * 113.61706 * 139.98204 * 20 19 5 23 23 F 1.39896 * 109.46871 * 59.99349 * 22 20 19 24 24 F 1.39900 * 109.46565 * 300.00081 * 22 20 19 25 25 F 1.39895 * 109.47057 * 179.97438 * 22 20 19 26 26 C 1.53779 * 113.61601 * 106.79913 * 5 3 2 27 27 H 1.09001 * 109.47652 * 60.00054 * 1 2 3 28 28 H 1.09004 * 109.46631 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47340 * 299.99630 * 1 2 3 30 30 H 0.97002 * 120.00071 * 113.59098 * 6 5 3 31 31 H 1.08004 * 119.94022 * 180.27830 * 12 10 9 32 32 H 1.08007 * 119.83115 * 179.76126 * 13 12 10 33 33 H 1.09003 * 109.46952 * 239.97877 * 15 14 13 34 34 H 0.96707 * 113.99630 * 300.00128 * 16 15 14 35 35 H 1.48504 * 109.99876 * 180.02562 * 17 15 14 36 36 H 1.48507 * 110.00224 * 301.32113 * 17 15 14 37 37 H 1.07999 * 120.05759 * 180.02562 * 18 14 13 38 38 H 1.09000 * 113.61991 * 105.47126 * 19 5 3 39 39 H 1.09004 * 113.68982 * 334.57391 * 19 5 3 40 40 H 0.96700 * 113.99830 * 178.46941 * 21 20 19 41 41 H 1.09005 * 113.61294 * 25.43629 * 26 5 3 42 42 H 1.08996 * 113.62010 * 254.53101 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2094 0.0005 5 6 3.5662 1.2750 -0.0006 6 7 4.1989 0.0780 0.5589 7 6 4.0458 -0.2172 1.8650 8 8 3.3096 0.4574 2.5584 9 6 4.7725 -1.3601 2.4539 10 6 4.6208 -1.6659 3.8098 11 9 3.8089 -0.9164 4.5870 12 6 5.3015 -2.7412 4.3519 13 6 6.1367 -3.5046 3.5584 14 6 6.2950 -3.2027 2.2165 15 6 7.2087 -4.0416 1.3606 16 8 6.4587 -4.6257 0.2936 17 14 7.9662 -5.3907 2.3983 18 6 5.6192 -2.1375 1.6605 19 6 4.1143 2.5896 0.5793 20 6 5.1634 2.5563 -0.5446 21 8 6.3551 1.8497 -0.1946 22 6 5.4455 3.9282 -1.1606 23 9 5.9213 4.7949 -0.1708 24 9 4.2657 4.4460 -1.7058 25 9 6.4076 3.7982 -2.1679 26 6 4.1595 1.7142 -1.3496 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 4.7280 -0.5022 -0.0106 31 1 5.1828 -2.9825 5.3979 32 1 6.6689 -4.3408 3.9873 33 1 7.9984 -3.4136 0.9483 34 1 5.7373 -5.1987 0.5877 35 1 8.8700 -6.2248 1.5659 36 1 8.7227 -4.7970 3.5300 37 1 5.7443 -1.9045 0.6134 38 1 4.5399 2.4829 1.5771 39 1 3.4189 3.4256 0.5029 40 1 7.0092 1.8052 -0.9054 41 1 3.4756 2.3101 -1.9541 42 1 4.6216 0.9009 -1.9090 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18364788_12335834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:17:20 Heat of formation + Delta-G solvation = -312.634389 kcal Electronic energy + Delta-G solvation = -39452.861823 eV Core-core repulsion = 33480.561548 eV Total energy + Delta-G solvation = -5972.300275 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 394.096 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -51.30317 -49.89569 -48.85133 -48.74289 -42.74799 -41.10069 -40.52721 -39.61064 -37.63506 -37.55954 -36.67155 -34.59202 -32.67865 -32.35143 -29.71155 -28.56390 -27.72919 -26.78155 -25.99998 -25.24028 -23.43554 -22.55111 -21.87402 -20.82505 -20.29362 -19.68391 -19.56113 -19.39046 -18.81455 -18.39400 -18.33386 -18.00857 -17.58597 -17.30240 -17.07612 -16.83303 -16.47898 -16.41918 -16.09683 -15.86445 -15.69445 -15.65273 -15.59834 -15.23995 -15.19791 -15.00630 -14.93319 -14.88900 -14.84112 -14.55401 -14.45702 -14.38983 -14.14295 -13.87305 -13.77603 -13.60009 -13.29648 -13.14317 -12.93712 -12.85311 -12.35596 -12.30311 -11.97601 -11.88488 -11.77512 -11.68245 -11.17801 -10.65836 -10.51253 -10.35907 -9.88526 -5.20298 -0.57291 -0.14140 0.94270 1.09070 1.22089 1.45312 1.49321 1.56917 1.72380 1.82803 2.09697 2.27601 2.38668 2.44935 2.58229 2.86578 2.96940 3.13961 3.18853 3.27581 3.30687 3.36114 3.47647 3.65474 3.80665 3.91966 3.95379 4.05358 4.10631 4.16972 4.24671 4.27418 4.32345 4.40178 4.55822 4.60858 4.61642 4.71884 4.81442 4.98959 5.00345 5.31141 5.48481 5.86441 6.13208 6.36032 6.62036 6.94886 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.347 6.347 3 C 0.476 3.524 4 O -0.491 6.491 5 C 0.172 3.828 6 N -0.692 5.692 7 C 0.570 3.430 8 O -0.510 6.510 9 C -0.171 4.171 10 C 0.169 3.831 11 F -0.110 7.110 12 C -0.156 4.156 13 C -0.059 4.059 14 C -0.141 4.141 15 C -0.066 4.066 16 O -0.538 6.538 17 Si 0.687 3.313 18 C -0.026 4.026 19 C -0.101 4.101 20 C 0.067 3.933 21 O -0.502 6.502 22 C 0.439 3.561 23 F -0.170 7.170 24 F -0.169 7.169 25 F -0.179 7.179 26 C -0.142 4.142 27 H 0.065 0.935 28 H 0.104 0.896 29 H 0.066 0.934 30 H 0.411 0.589 31 H 0.150 0.850 32 H 0.142 0.858 33 H 0.119 0.881 34 H 0.381 0.619 35 H -0.252 1.252 36 H -0.255 1.255 37 H 0.140 0.860 38 H 0.113 0.887 39 H 0.134 0.866 40 H 0.393 0.607 41 H 0.131 0.869 42 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.908 -7.504 -2.149 8.035 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.263 6.263 3 C 0.316 3.684 4 O -0.377 6.377 5 C 0.083 3.917 6 N -0.347 5.347 7 C 0.358 3.642 8 O -0.385 6.385 9 C -0.175 4.175 10 C 0.148 3.852 11 F -0.088 7.088 12 C -0.175 4.175 13 C -0.076 4.076 14 C -0.141 4.141 15 C -0.177 4.177 16 O -0.344 6.344 17 Si 0.589 3.411 18 C -0.045 4.045 19 C -0.139 4.139 20 C 0.023 3.977 21 O -0.309 6.309 22 C 0.384 3.616 23 F -0.151 7.151 24 F -0.151 7.151 25 F -0.161 7.161 26 C -0.180 4.180 27 H 0.084 0.916 28 H 0.122 0.878 29 H 0.085 0.915 30 H 0.249 0.751 31 H 0.168 0.832 32 H 0.159 0.841 33 H 0.136 0.864 34 H 0.229 0.771 35 H -0.176 1.176 36 H -0.180 1.180 37 H 0.157 0.843 38 H 0.132 0.868 39 H 0.152 0.848 40 H 0.244 0.756 41 H 0.149 0.851 42 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 1.982 -6.728 -1.110 7.101 hybrid contribution 0.343 0.832 -0.977 1.328 sum 2.324 -5.896 -2.086 6.672 Atomic orbital electron populations 1.23359 0.75591 1.04102 1.02857 1.86495 1.23888 1.32582 1.83322 1.23240 0.90627 0.82066 0.72448 1.90718 1.65900 1.36316 1.44718 1.20646 0.85934 0.88041 0.97082 1.45258 1.53907 1.25564 1.09988 1.17943 0.81046 0.83813 0.81431 1.90901 1.36492 1.50839 1.60275 1.19886 1.04074 0.99969 0.93569 1.17739 0.89906 0.90095 0.87446 1.91635 1.69364 1.74285 1.73539 1.21168 0.98894 0.95372 1.02084 1.21111 0.95665 0.98122 0.92748 1.20328 1.00904 0.98255 0.94644 1.25030 0.96618 1.01676 0.94331 1.86515 1.49363 1.66581 1.31928 0.94756 0.85246 0.81886 0.79249 1.21002 0.92142 0.91913 0.99460 1.23496 0.94284 0.96601 0.99537 1.23301 0.88315 0.87136 0.98932 1.86696 1.26848 1.74370 1.42959 1.20939 0.74717 0.89061 0.76872 1.93251 1.88376 1.72253 1.61203 1.93229 1.47195 1.88344 1.86302 1.93201 1.64643 1.96011 1.62225 1.24055 0.97996 1.01209 0.94763 0.91607 0.87781 0.91529 0.75125 0.83199 0.84092 0.86395 0.77109 1.17638 1.17998 0.84258 0.86811 0.84781 0.75615 0.85105 0.86749 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 101.05 1.07 1.08 16 2 O -0.35 -0.84 10.25 -39.26 -0.40 -1.24 16 3 C 0.48 1.43 6.37 36.00 0.23 1.66 16 4 O -0.49 -2.60 15.80 -18.75 -0.30 -2.90 16 5 C 0.17 0.05 1.01 -132.16 -0.13 -0.09 16 6 N -0.69 0.46 4.38 -48.91 -0.21 0.25 16 7 C 0.57 1.32 7.22 -12.40 -0.09 1.23 16 8 O -0.51 -3.17 14.08 5.30 0.07 -3.10 16 9 C -0.17 -0.10 5.88 -104.91 -0.62 -0.72 16 10 C 0.17 0.23 7.29 -38.96 -0.28 -0.05 16 11 F -0.11 -0.47 15.55 2.25 0.04 -0.44 16 12 C -0.16 0.24 10.01 -39.56 -0.40 -0.16 16 13 C -0.06 0.18 8.66 -39.52 -0.34 -0.17 16 14 C -0.14 0.39 5.39 -104.68 -0.56 -0.17 16 15 C -0.07 0.22 2.82 36.01 0.10 0.32 16 16 O -0.54 1.61 12.76 -35.23 -0.45 1.16 16 17 Si 0.69 -2.41 29.78 -169.99 -5.06 -7.47 16 18 C -0.03 0.05 9.09 -39.19 -0.36 -0.30 16 19 C -0.10 -0.09 6.08 -25.92 -0.16 -0.25 16 20 C 0.07 -0.10 1.35 -89.80 -0.12 -0.22 16 21 O -0.50 1.32 12.91 -35.23 -0.45 0.86 16 22 C 0.44 -0.02 2.85 37.16 0.11 0.09 16 23 F -0.17 -0.32 17.18 2.25 0.04 -0.28 16 24 F -0.17 -0.15 15.75 2.25 0.04 -0.11 16 25 F -0.18 0.08 16.67 2.25 0.04 0.12 16 26 C -0.14 0.39 6.63 -25.92 -0.17 0.22 16 27 H 0.07 -0.02 8.13 -51.93 -0.42 -0.44 16 28 H 0.10 -0.22 8.14 -51.93 -0.42 -0.64 16 29 H 0.07 0.09 8.13 -51.93 -0.42 -0.34 16 30 H 0.41 -1.48 6.72 -40.82 -0.27 -1.76 16 31 H 0.15 -0.50 8.06 -52.48 -0.42 -0.92 16 32 H 0.14 -0.73 4.86 -52.48 -0.25 -0.98 16 33 H 0.12 -0.37 7.96 -51.93 -0.41 -0.79 16 34 H 0.38 -2.49 8.70 45.56 0.40 -2.09 16 35 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 36 H -0.26 0.30 7.11 56.52 0.40 0.70 16 37 H 0.14 -0.57 6.42 -52.49 -0.34 -0.91 16 38 H 0.11 0.26 7.46 -51.93 -0.39 -0.12 16 39 H 0.13 0.18 7.13 -51.93 -0.37 -0.19 16 40 H 0.39 -2.40 8.46 45.56 0.39 -2.01 16 41 H 0.13 -0.35 7.09 -51.93 -0.37 -0.71 16 42 H 0.11 -0.64 8.10 -51.93 -0.42 -1.06 16 LS Contribution 375.90 15.07 5.66 5.66 Total: 0.00 -11.26 375.90 -5.65 -16.92 By element: Atomic # 1 Polarization: -8.95 SS G_CDS: -2.93 Total: -11.89 kcal Atomic # 6 Polarization: 4.19 SS G_CDS: -1.73 Total: 2.46 kcal Atomic # 7 Polarization: 0.46 SS G_CDS: -0.21 Total: 0.25 kcal Atomic # 8 Polarization: -3.69 SS G_CDS: -1.53 Total: -5.22 kcal Atomic # 9 Polarization: -0.86 SS G_CDS: 0.15 Total: -0.72 kcal Atomic # 14 Polarization: -2.41 SS G_CDS: -5.06 Total: -7.47 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -11.26 -5.65 -16.92 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_12335834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -295.717 kcal (2) G-P(sol) polarization free energy of solvation -11.264 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -306.981 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.654 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.917 kcal (6) G-S(sol) free energy of system = (1) + (5) -312.634 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds