Wall clock time and date at job start Tue Mar 9 2021 14:17:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34230 * 116.99743 * 2 1 4 4 O 1.20824 * 120.00142 * 0.02562 * 3 2 1 5 5 C 1.50707 * 119.99757 * 179.97438 * 3 2 1 6 6 N 1.46497 * 112.84800 * 334.66971 * 5 3 2 7 7 C 1.34777 * 120.00295 * 50.33272 * 6 5 3 8 8 O 1.21276 * 119.99774 * 359.97438 * 7 6 5 9 9 C 1.50697 * 119.99889 * 180.02562 * 7 6 5 10 10 C 1.50696 * 109.47101 * 180.02562 * 9 7 6 11 11 C 1.38230 * 120.00328 * 89.99839 * 10 9 7 12 12 C 1.38235 * 120.00326 * 179.97438 * 11 10 9 13 13 C 1.38234 * 119.99814 * 359.97438 * 12 11 10 14 14 C 1.50706 * 120.00196 * 179.97438 * 13 12 11 15 15 O 1.42902 * 109.46735 * 65.00425 * 14 13 12 16 16 Si 1.86301 * 109.47185 * 185.00151 * 14 13 12 17 17 C 1.38240 * 120.00061 * 0.07178 * 13 12 11 18 18 C 1.38234 * 119.99689 * 359.90912 * 17 13 12 19 19 C 1.53781 * 113.61320 * 203.46713 * 5 3 2 20 20 C 1.53780 * 87.07940 * 219.93868 * 19 5 3 21 21 O 1.42897 * 113.61290 * 270.88511 * 20 19 5 22 22 C 1.53002 * 113.61335 * 139.98578 * 20 19 5 23 23 F 1.39896 * 109.47053 * 59.99842 * 22 20 19 24 24 F 1.39900 * 109.47025 * 179.97438 * 22 20 19 25 25 F 1.39898 * 109.47165 * 299.99817 * 22 20 19 26 26 C 1.53777 * 113.61108 * 105.86250 * 5 3 2 27 27 H 1.08993 * 109.47435 * 60.00137 * 1 2 3 28 28 H 1.09003 * 109.47161 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.47085 * 299.99982 * 1 2 3 30 30 H 0.97003 * 119.99673 * 230.32607 * 6 5 3 31 31 H 1.09001 * 109.47237 * 59.99581 * 9 7 6 32 32 H 1.09001 * 109.47252 * 299.99828 * 9 7 6 33 33 H 1.08000 * 120.00376 * 0.02562 * 11 10 9 34 34 H 1.08000 * 120.00616 * 179.72578 * 12 11 10 35 35 H 1.09000 * 109.46902 * 305.00419 * 14 13 12 36 36 H 0.96701 * 113.99771 * 180.02562 * 15 14 13 37 37 H 1.48495 * 109.99793 * 178.68156 * 16 14 13 38 38 H 1.48497 * 109.99903 * 300.00163 * 16 14 13 39 39 H 1.08005 * 120.00107 * 179.97438 * 17 13 12 40 40 H 1.07999 * 119.99751 * 180.02562 * 18 17 13 41 41 H 1.08995 * 113.61454 * 334.48597 * 19 5 3 42 42 H 1.08996 * 113.60893 * 105.39093 * 19 5 3 43 43 H 0.96704 * 114.00163 * 180.02562 * 21 20 19 44 44 H 1.08996 * 113.61836 * 254.61491 * 26 5 3 45 45 H 1.09006 * 113.61769 * 25.51725 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 7 4.1980 0.0862 0.5787 7 6 3.8371 -1.1417 0.1562 8 8 2.9890 -1.2625 -0.7022 9 6 4.4865 -2.3644 0.7513 10 6 3.9106 -3.6010 0.1111 11 6 4.4955 -4.1274 -1.0254 12 6 3.9675 -5.2621 -1.6124 13 6 2.8548 -5.8707 -1.0626 14 6 2.2788 -7.1074 -1.7028 15 8 3.2242 -8.1751 -1.6121 16 14 0.7104 -7.5902 -0.8209 17 6 2.2692 -5.3438 0.0734 18 6 2.7975 -4.2093 0.6606 19 6 4.1136 2.5980 0.5616 20 6 5.1657 2.5468 -0.5587 21 8 6.3552 1.8433 -0.1952 22 6 5.4503 3.9089 -1.1949 23 9 5.9240 4.7903 -0.2172 24 9 6.4151 3.7629 -2.1974 25 9 4.2724 4.4190 -1.7513 26 6 4.1618 1.6915 -1.3546 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 4.8762 0.1829 1.2655 31 1 4.2988 -2.3894 1.8248 32 1 5.5609 -2.3292 0.5711 33 1 5.3656 -3.6526 -1.4543 34 1 4.4219 -5.6708 -2.5028 35 1 2.0587 -6.9050 -2.7510 36 1 2.9198 -9.0045 -2.0054 37 1 0.1155 -8.7899 -1.4627 38 1 0.9971 -7.8688 0.6093 39 1 1.3996 -5.8191 0.5027 40 1 2.3402 -3.7979 1.5483 41 1 3.4181 3.4321 0.4697 42 1 4.5363 2.5062 1.5621 43 1 7.0210 1.8080 -0.8957 44 1 4.6234 0.8685 -1.9003 45 1 3.4794 2.2783 -1.9696 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18364788_12335836.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:17:22 Heat of formation + Delta-G solvation = -272.225059 kcal Electronic energy + Delta-G solvation = -38237.362975 eV Core-core repulsion = 32580.731337 eV Total energy + Delta-G solvation = -5656.631638 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.121 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -51.28789 -48.83251 -48.75658 -42.60529 -40.86041 -40.44773 -39.60694 -37.75051 -37.52891 -36.42573 -34.30014 -33.84165 -31.87675 -30.26768 -29.11327 -28.46197 -27.54157 -25.90721 -25.26201 -23.75390 -22.72238 -22.24809 -21.33171 -20.63465 -20.18005 -19.60282 -19.48309 -18.90925 -18.56239 -18.27273 -17.66017 -17.54970 -17.27667 -17.15417 -16.81535 -16.34245 -16.22784 -15.90475 -15.62116 -15.54287 -15.26461 -15.19906 -15.06997 -15.00617 -14.92927 -14.84231 -14.75684 -14.53045 -14.46818 -14.30989 -14.10722 -13.96076 -13.76635 -13.60718 -13.42311 -12.99246 -12.97187 -12.83567 -12.71416 -12.24899 -12.21021 -11.89688 -11.84975 -11.74493 -11.68393 -11.35864 -10.76117 -10.49012 -10.22431 -9.80660 -9.54722 -4.93824 0.29267 0.52572 0.89161 1.29266 1.33033 1.57342 1.71391 1.82147 1.90910 1.93050 2.26113 2.47597 2.50913 2.68979 2.77769 3.00758 3.28180 3.37489 3.43330 3.71357 3.72409 3.91039 3.96106 4.05052 4.11914 4.15844 4.25306 4.27334 4.31908 4.35162 4.40920 4.51719 4.52459 4.55229 4.58615 4.70709 4.71798 4.78970 5.08043 5.15317 5.28835 5.34591 5.44433 5.60722 5.65744 6.07637 6.23992 6.55204 6.57618 6.61640 7.34571 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.316 6.316 3 C 0.464 3.536 4 O -0.531 6.531 5 C 0.171 3.829 6 N -0.692 5.692 7 C 0.512 3.488 8 O -0.521 6.521 9 C -0.093 4.093 10 C -0.067 4.067 11 C -0.112 4.112 12 C -0.109 4.109 13 C -0.091 4.091 14 C -0.087 4.087 15 O -0.558 6.558 16 Si 0.760 3.240 17 C -0.128 4.128 18 C -0.106 4.106 19 C -0.101 4.101 20 C 0.086 3.914 21 O -0.501 6.501 22 C 0.435 3.565 23 F -0.178 7.178 24 F -0.181 7.181 25 F -0.180 7.180 26 C -0.147 4.147 27 H 0.054 0.946 28 H 0.119 0.881 29 H 0.061 0.939 30 H 0.427 0.573 31 H 0.128 0.872 32 H 0.130 0.870 33 H 0.136 0.864 34 H 0.122 0.878 35 H 0.088 0.912 36 H 0.393 0.607 37 H -0.286 1.286 38 H -0.295 1.295 39 H 0.134 0.866 40 H 0.141 0.859 41 H 0.128 0.872 42 H 0.135 0.865 43 H 0.409 0.591 44 H 0.113 0.887 45 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.175 -1.001 2.116 3.195 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.230 6.230 3 C 0.306 3.694 4 O -0.421 6.421 5 C 0.080 3.920 6 N -0.349 5.349 7 C 0.299 3.701 8 O -0.395 6.395 9 C -0.132 4.132 10 C -0.067 4.067 11 C -0.130 4.130 12 C -0.128 4.128 13 C -0.091 4.091 14 C -0.195 4.195 15 O -0.367 6.367 16 Si 0.665 3.335 17 C -0.145 4.145 18 C -0.124 4.124 19 C -0.138 4.138 20 C 0.042 3.958 21 O -0.310 6.310 22 C 0.380 3.620 23 F -0.160 7.160 24 F -0.162 7.162 25 F -0.161 7.161 26 C -0.186 4.186 27 H 0.073 0.927 28 H 0.137 0.863 29 H 0.080 0.920 30 H 0.267 0.733 31 H 0.146 0.854 32 H 0.148 0.852 33 H 0.154 0.846 34 H 0.140 0.860 35 H 0.106 0.894 36 H 0.243 0.757 37 H -0.214 1.214 38 H -0.223 1.223 39 H 0.151 0.849 40 H 0.159 0.841 41 H 0.146 0.854 42 H 0.153 0.847 43 H 0.262 0.738 44 H 0.132 0.868 45 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges 0.969 -1.043 2.772 3.116 hybrid contribution 0.916 -0.499 -1.119 1.530 sum 1.885 -1.542 1.653 2.944 Atomic orbital electron populations 1.23463 0.76724 1.04949 1.01918 1.87030 1.23200 1.30860 1.81890 1.23909 0.91737 0.82021 0.71691 1.90694 1.66989 1.37392 1.46991 1.20586 0.84849 0.88835 0.97685 1.45506 1.43418 1.02548 1.43476 1.20953 0.82119 0.84414 0.82599 1.90803 1.31117 1.86120 1.31457 1.20680 1.02502 0.87564 1.02447 1.19523 0.95789 0.95853 0.95552 1.21227 1.00533 0.95812 0.95413 1.21093 0.95596 0.95794 1.00278 1.19453 0.97381 0.95819 0.96449 1.25012 1.01454 0.87607 1.05453 1.86545 1.43405 1.23223 1.83559 0.94073 0.78526 0.84780 0.76115 1.21119 1.00396 0.97662 0.95323 1.21172 0.95565 0.95098 1.00541 1.23488 0.94422 0.95368 1.00512 1.23075 0.88647 0.86066 0.98041 1.86554 1.26147 1.73943 1.44361 1.21274 0.74301 0.89426 0.77001 1.93226 1.88552 1.71909 1.62282 1.93199 1.64464 1.95815 1.62734 1.93211 1.47974 1.88842 1.86114 1.24159 0.97615 1.00915 0.95895 0.92686 0.86264 0.92000 0.73335 0.85391 0.85186 0.84612 0.85964 0.89399 0.75650 1.21368 1.22277 0.84903 0.84135 0.85425 0.84699 0.73784 0.86835 0.87223 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.05 10.56 113.37 1.20 1.25 16 2 O -0.32 -1.80 6.31 -43.43 -0.27 -2.08 16 3 C 0.46 2.39 7.07 71.24 0.50 2.90 16 4 O -0.53 -5.25 15.79 21.97 0.35 -4.91 16 5 C 0.17 -0.34 1.11 3.38 0.00 -0.33 16 6 N -0.69 4.36 4.76 -423.93 -2.02 2.35 16 7 C 0.51 -1.27 7.18 87.66 0.63 -0.64 16 8 O -0.52 -2.91 12.56 21.11 0.27 -2.65 16 9 C -0.09 0.66 5.83 29.10 0.17 0.83 16 10 C -0.07 0.02 4.37 -19.87 -0.09 -0.06 16 11 C -0.11 -0.16 9.70 22.27 0.22 0.05 16 12 C -0.11 -0.46 9.69 22.27 0.22 -0.25 16 13 C -0.09 -0.40 5.38 -19.86 -0.11 -0.51 16 14 C -0.09 -0.15 2.79 71.24 0.20 0.05 16 15 O -0.56 -2.16 12.81 -148.98 -1.91 -4.07 16 16 Si 0.76 -0.13 29.85 68.60 2.05 1.91 16 17 C -0.13 -0.35 8.67 22.27 0.19 -0.15 16 18 C -0.11 -0.08 9.70 22.27 0.22 0.13 16 19 C -0.10 0.47 6.41 31.12 0.20 0.67 16 20 C 0.09 -0.46 1.36 -10.18 -0.01 -0.47 16 21 O -0.50 4.66 12.78 -148.98 -1.90 2.76 16 22 C 0.43 -0.51 2.85 71.98 0.21 -0.30 16 23 F -0.18 -0.19 17.18 44.97 0.77 0.58 16 24 F -0.18 0.18 16.65 44.97 0.75 0.93 16 25 F -0.18 -0.41 15.76 44.97 0.71 0.30 16 26 C -0.15 0.41 6.70 31.21 0.21 0.62 16 27 H 0.05 0.18 8.13 -2.39 -0.02 0.16 16 28 H 0.12 -0.24 8.14 -2.39 -0.02 -0.26 16 29 H 0.06 0.08 8.13 -2.39 -0.02 0.06 16 30 H 0.43 -5.06 8.47 -92.71 -0.79 -5.85 16 31 H 0.13 -1.48 8.09 -2.39 -0.02 -1.50 16 32 H 0.13 -1.54 8.08 -2.39 -0.02 -1.56 16 33 H 0.14 -0.33 8.06 -2.91 -0.02 -0.35 16 34 H 0.12 0.38 8.06 -2.91 -0.02 0.36 16 35 H 0.09 -0.13 7.96 -2.39 -0.02 -0.15 16 36 H 0.39 -1.67 8.74 -74.06 -0.65 -2.31 16 37 H -0.29 -1.04 7.11 99.48 0.71 -0.33 16 38 H -0.30 -1.87 7.05 99.48 0.70 -1.17 16 39 H 0.13 -0.02 4.87 -2.91 -0.01 -0.04 16 40 H 0.14 -0.48 8.06 -2.91 -0.02 -0.50 16 41 H 0.13 -0.28 7.12 -2.39 -0.02 -0.30 16 42 H 0.13 -1.24 8.11 -2.39 -0.02 -1.26 16 43 H 0.41 -5.83 8.42 -74.05 -0.62 -6.46 16 44 H 0.11 -0.42 8.14 -2.39 -0.02 -0.44 16 45 H 0.11 -0.04 7.09 -2.38 -0.02 -0.06 16 Total: 0.00 -24.87 391.66 1.81 -23.06 By element: Atomic # 1 Polarization: -21.03 SS G_CDS: -0.92 Total: -21.95 kcal Atomic # 6 Polarization: -0.17 SS G_CDS: 3.95 Total: 3.78 kcal Atomic # 7 Polarization: 4.36 SS G_CDS: -2.02 Total: 2.35 kcal Atomic # 8 Polarization: -7.47 SS G_CDS: -3.47 Total: -10.95 kcal Atomic # 9 Polarization: -0.43 SS G_CDS: 2.23 Total: 1.80 kcal Atomic # 14 Polarization: -0.13 SS G_CDS: 2.05 Total: 1.91 kcal Total: -24.87 1.81 -23.06 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_12335836.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -249.167 kcal (2) G-P(sol) polarization free energy of solvation -24.871 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -274.039 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.813 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.058 kcal (6) G-S(sol) free energy of system = (1) + (5) -272.225 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds