Wall clock time and date at job start Tue Mar 9 2021 14:17:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34224 * 116.99933 * 2 1 4 4 O 1.20830 * 120.00076 * 0.02562 * 3 2 1 5 5 C 1.50697 * 120.00108 * 180.02562 * 3 2 1 6 6 N 1.46501 * 112.84990 * 324.47801 * 5 3 2 7 7 C 1.34782 * 120.00002 * 294.07462 * 6 5 3 8 8 O 1.21599 * 119.99694 * 354.99639 * 7 6 5 9 9 C 1.47572 * 120.00158 * 174.71643 * 7 6 5 10 10 C 1.40199 * 119.83127 * 359.72714 * 9 7 6 11 11 C 1.36237 * 120.37642 * 179.75654 * 10 9 7 12 12 C 1.39877 * 119.96238 * 0.52005 * 11 10 9 13 13 C 1.46252 * 133.84420 * 179.71393 * 12 11 10 14 14 C 1.50692 * 126.48734 * 0.03946 * 13 12 11 15 15 O 1.42908 * 109.47070 * 74.99928 * 14 13 12 16 16 Si 1.86295 * 109.47712 * 195.00239 * 14 13 12 17 17 C 1.34458 * 107.03271 * 180.02562 * 13 12 11 18 18 N 1.36557 * 109.98810 * 359.97438 * 17 13 12 19 19 C 1.37833 * 109.86071 * 359.97438 * 18 17 13 20 20 C 1.38638 * 133.38120 * 179.97438 * 19 18 17 21 21 C 1.53780 * 113.61839 * 193.27952 * 5 3 2 22 22 C 1.53777 * 87.08318 * 219.93570 * 21 5 3 23 23 O 1.42898 * 113.61519 * 270.88048 * 22 21 5 24 24 C 1.53005 * 113.61503 * 139.97937 * 22 21 5 25 25 F 1.39899 * 109.46955 * 60.00303 * 24 22 21 26 26 F 1.39903 * 109.47087 * 179.97438 * 24 22 21 27 27 F 1.39899 * 109.47092 * 299.99675 * 24 22 21 28 28 C 1.53781 * 113.68916 * 95.74391 * 5 3 2 29 29 H 1.08998 * 109.47175 * 179.97438 * 1 2 3 30 30 H 1.09005 * 109.46766 * 299.99515 * 1 2 3 31 31 H 1.08999 * 109.47622 * 59.99618 * 1 2 3 32 32 H 0.96997 * 120.00655 * 114.08290 * 6 5 3 33 33 H 1.07995 * 119.81475 * 0.02562 * 10 9 7 34 34 H 1.08007 * 120.02039 * 180.25917 * 11 10 9 35 35 H 1.08999 * 109.47538 * 315.00818 * 14 13 12 36 36 H 0.96705 * 113.99549 * 60.00007 * 15 14 13 37 37 H 1.48496 * 110.00416 * 180.02562 * 16 14 13 38 38 H 1.48504 * 109.99869 * 301.32033 * 16 14 13 39 39 H 1.08006 * 125.00718 * 179.97438 * 17 13 12 40 40 H 0.97004 * 125.07443 * 180.02562 * 18 17 13 41 41 H 1.07999 * 120.16776 * 0.02562 * 20 19 18 42 42 H 1.09002 * 113.61024 * 334.48334 * 21 5 3 43 43 H 1.09004 * 113.61668 * 105.38555 * 21 5 3 44 44 H 0.96699 * 114.00366 * 179.97438 * 23 22 21 45 45 H 1.09007 * 113.61136 * 254.54080 * 28 5 3 46 46 H 1.08997 * 113.61873 * 25.44803 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1922 0.2072 0.7833 7 6 4.0178 0.1610 2.1190 8 8 3.4178 1.0544 2.6851 9 6 4.5496 -0.9770 2.8937 10 6 5.2307 -2.0109 2.2359 11 6 5.7305 -3.0642 2.9407 12 6 5.5555 -3.1230 4.3272 13 6 5.9470 -4.0840 5.3579 14 6 6.7092 -5.3663 5.1444 15 8 8.0859 -5.0677 4.9039 16 14 6.5618 -6.4366 6.6621 17 6 5.4984 -3.6067 6.5322 18 7 4.8528 -2.4192 6.3374 19 6 4.8691 -2.0914 4.9987 20 6 4.3692 -1.0202 4.2745 21 6 4.1098 2.6765 0.3231 22 6 5.1714 2.4295 -0.7617 23 8 6.3573 1.8020 -0.2698 24 6 5.4624 3.6583 -1.6256 25 9 5.9285 4.6987 -0.8146 26 9 6.4356 3.3386 -2.5784 27 9 4.2896 4.0613 -2.2733 28 6 4.1753 1.4482 -1.4020 29 1 -0.3633 -1.0276 -0.0005 30 1 -0.3633 0.5138 0.8901 31 1 -0.3634 0.5139 -0.8899 32 1 4.7323 -0.4664 0.3413 33 1 5.3637 -1.9700 1.1649 34 1 6.2579 -3.8555 2.4286 35 1 6.2969 -5.8953 4.2853 36 1 8.5184 -4.5959 5.6289 37 1 7.3098 -7.7041 6.4644 38 1 7.0916 -5.7141 7.8464 39 1 5.6295 -4.0911 7.4886 40 1 4.4442 -1.8856 7.0369 41 1 3.8404 -0.2243 4.7778 42 1 3.4157 3.4809 0.0797 43 1 4.5240 2.7630 1.3277 44 1 7.0286 1.6436 -0.9475 45 1 4.6424 0.5430 -1.7900 46 1 3.4992 1.9169 -2.1170 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18364788_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:17:27 Heat of formation + Delta-G solvation = -237.070520 kcal Electronic energy + Delta-G solvation = -41326.182573 eV Core-core repulsion = 35349.197158 eV Total energy + Delta-G solvation = -5976.985415 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 415.117 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -51.27312 -48.82310 -48.71191 -42.74065 -42.41509 -40.72622 -40.03211 -37.98832 -37.56943 -37.50167 -36.61546 -34.34495 -33.28947 -30.86233 -30.73400 -29.51566 -28.52369 -27.63266 -26.56948 -25.75191 -24.69115 -23.65129 -22.53225 -21.83701 -20.87395 -20.76504 -20.25314 -19.61627 -19.51438 -19.41707 -18.96283 -18.44031 -18.00497 -17.69708 -17.34352 -17.22252 -16.97435 -16.43098 -16.29083 -16.19887 -15.85327 -15.70242 -15.61238 -15.57486 -15.17836 -15.17199 -15.12569 -14.94005 -14.92191 -14.86947 -14.78802 -14.75820 -14.52717 -14.36442 -14.08578 -13.91494 -13.78935 -13.52671 -13.19295 -13.12945 -12.81487 -12.63297 -12.50622 -12.31986 -12.20026 -11.83515 -11.80633 -11.78648 -11.61000 -11.01919 -10.78081 -10.51197 -10.35945 -9.38092 -8.84254 -4.99418 -0.30219 0.37881 0.94841 1.25053 1.26788 1.33374 1.52310 1.61748 1.67209 1.91408 1.97080 2.03492 2.17013 2.35460 2.45802 2.63634 2.85500 2.97013 3.21250 3.32526 3.44911 3.50126 3.62361 3.72327 3.74458 3.83176 3.99230 4.07070 4.09789 4.15885 4.16866 4.25920 4.29437 4.39680 4.42301 4.49368 4.54520 4.59929 4.67951 4.74030 4.96439 5.10674 5.20055 5.30826 5.41490 5.46128 5.59113 5.93907 5.96185 6.28521 6.33128 6.46981 6.63555 7.07673 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.349 6.349 3 C 0.473 3.527 4 O -0.488 6.488 5 C 0.173 3.827 6 N -0.692 5.692 7 C 0.573 3.427 8 O -0.528 6.528 9 C -0.118 4.118 10 C -0.109 4.109 11 C -0.072 4.072 12 C -0.061 4.061 13 C -0.207 4.207 14 C -0.037 4.037 15 O -0.531 6.531 16 Si 0.684 3.316 17 C 0.075 3.925 18 N -0.583 5.583 19 C 0.081 3.919 20 C -0.054 4.054 21 C -0.101 4.101 22 C 0.066 3.934 23 O -0.500 6.500 24 C 0.438 3.562 25 F -0.170 7.170 26 F -0.180 7.180 27 F -0.170 7.170 28 C -0.144 4.144 29 H 0.104 0.896 30 H 0.065 0.935 31 H 0.066 0.934 32 H 0.412 0.588 33 H 0.126 0.874 34 H 0.131 0.869 35 H 0.115 0.885 36 H 0.374 0.626 37 H -0.256 1.256 38 H -0.260 1.260 39 H 0.176 0.824 40 H 0.422 0.578 41 H 0.136 0.864 42 H 0.132 0.868 43 H 0.116 0.884 44 H 0.393 0.607 45 H 0.114 0.886 46 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.422 -5.954 0.532 5.992 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.265 6.265 3 C 0.313 3.687 4 O -0.373 6.373 5 C 0.084 3.916 6 N -0.347 5.347 7 C 0.362 3.638 8 O -0.405 6.405 9 C -0.122 4.122 10 C -0.129 4.129 11 C -0.090 4.090 12 C -0.066 4.066 13 C -0.214 4.214 14 C -0.148 4.148 15 O -0.337 6.337 16 Si 0.585 3.415 17 C -0.054 4.054 18 N -0.186 5.186 19 C -0.025 4.025 20 C -0.075 4.075 21 C -0.139 4.139 22 C 0.022 3.978 23 O -0.307 6.307 24 C 0.384 3.616 25 F -0.151 7.151 26 F -0.161 7.161 27 F -0.152 7.152 28 C -0.182 4.182 29 H 0.123 0.877 30 H 0.084 0.916 31 H 0.084 0.916 32 H 0.250 0.750 33 H 0.144 0.856 34 H 0.149 0.851 35 H 0.133 0.867 36 H 0.221 0.779 37 H -0.181 1.181 38 H -0.185 1.185 39 H 0.193 0.807 40 H 0.260 0.740 41 H 0.154 0.846 42 H 0.150 0.850 43 H 0.135 0.865 44 H 0.243 0.757 45 H 0.133 0.867 46 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -1.175 -5.621 1.674 5.981 hybrid contribution 1.195 0.957 -0.555 1.628 sum 0.020 -4.664 1.119 4.796 Atomic orbital electron populations 1.23366 0.75645 1.04127 1.02865 1.86507 1.23865 1.32617 1.83461 1.23333 0.90745 0.82024 0.72626 1.90713 1.65967 1.36338 1.44261 1.20622 0.85728 0.90907 0.94382 1.45289 1.53235 1.29338 1.06826 1.18189 0.78749 0.85665 0.81215 1.90834 1.41428 1.38393 1.69813 1.19236 1.04064 0.95931 0.92970 1.20664 0.98856 0.93833 0.99558 1.20200 0.98859 0.98269 0.91676 1.19173 0.99729 0.94267 0.93410 1.20667 1.09154 0.99834 0.91772 1.24285 0.81833 0.96976 1.11694 1.86613 1.22391 1.78942 1.45718 0.95176 0.91584 0.79357 0.75396 1.21829 0.96887 0.87261 0.99415 1.41726 1.49660 1.20333 1.06836 1.18054 1.03086 0.97356 0.83995 1.20053 0.98967 0.96206 0.92303 1.23486 0.93915 0.95696 1.00782 1.23319 0.88512 0.89618 0.96322 1.86713 1.26155 1.79542 1.38316 1.20971 0.74708 0.86341 0.79616 1.93250 1.88693 1.60685 1.72463 1.93202 1.63926 1.92606 1.66363 1.93221 1.47835 1.91653 1.82478 1.24051 0.97931 1.01455 0.94773 0.87717 0.91607 0.91572 0.74961 0.85584 0.85082 0.86694 0.77871 1.18068 1.18505 0.80698 0.74009 0.84623 0.84988 0.86524 0.75669 0.86717 0.85384 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.07 16 2 O -0.35 -0.70 10.41 -39.24 -0.41 -1.11 16 3 C 0.47 1.39 6.59 36.00 0.24 1.62 16 4 O -0.49 -2.64 15.66 -18.75 -0.29 -2.94 16 5 C 0.17 0.07 1.00 -132.16 -0.13 -0.06 16 6 N -0.69 0.26 4.47 -48.94 -0.22 0.04 16 7 C 0.57 1.38 7.31 -12.45 -0.09 1.29 16 8 O -0.53 -3.06 14.85 5.28 0.08 -2.98 16 9 C -0.12 -0.16 5.87 -104.95 -0.62 -0.77 16 10 C -0.11 0.05 9.46 -39.57 -0.37 -0.32 16 11 C -0.07 -0.01 10.03 -39.69 -0.40 -0.41 16 12 C -0.06 -0.06 6.35 -105.05 -0.67 -0.73 16 13 C -0.21 0.10 5.57 -102.74 -0.57 -0.47 16 14 C -0.04 0.04 3.06 36.00 0.11 0.15 16 15 O -0.53 -0.34 12.88 -35.23 -0.45 -0.80 16 16 Si 0.68 -1.54 30.82 -169.99 -5.24 -6.78 16 17 C 0.07 -0.16 10.43 -16.78 -0.18 -0.33 16 18 N -0.58 0.96 6.07 -10.68 -0.06 0.90 16 19 C 0.08 0.07 7.26 -84.00 -0.61 -0.54 16 20 C -0.05 -0.08 9.61 -39.03 -0.37 -0.46 16 21 C -0.10 -0.12 5.98 -25.92 -0.15 -0.27 16 22 C 0.07 -0.08 1.36 -89.81 -0.12 -0.20 16 23 O -0.50 1.07 12.91 -35.23 -0.45 0.62 16 24 C 0.44 0.05 2.85 37.16 0.11 0.16 16 25 F -0.17 -0.35 17.18 2.25 0.04 -0.31 16 26 F -0.18 0.05 16.65 2.25 0.04 0.09 16 27 F -0.17 -0.15 15.75 2.25 0.04 -0.12 16 28 C -0.14 0.37 6.63 -25.92 -0.17 0.20 16 29 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 30 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 31 H 0.07 -0.03 8.13 -51.93 -0.42 -0.45 16 32 H 0.41 -1.32 6.67 -40.82 -0.27 -1.59 16 33 H 0.13 -0.43 6.37 -52.49 -0.33 -0.76 16 34 H 0.13 -0.13 8.06 -52.48 -0.42 -0.55 16 35 H 0.12 -0.16 7.96 -51.93 -0.41 -0.58 16 36 H 0.37 -0.78 8.70 45.56 0.40 -0.38 16 37 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 38 H -0.26 0.24 7.00 56.52 0.40 0.63 16 39 H 0.18 -0.83 6.27 -52.48 -0.33 -1.16 16 40 H 0.42 -1.79 8.96 -40.82 -0.37 -2.15 16 41 H 0.14 0.20 7.62 -52.49 -0.40 -0.20 16 42 H 0.13 0.21 7.09 -51.93 -0.37 -0.16 16 43 H 0.12 0.32 7.19 -51.93 -0.37 -0.05 16 44 H 0.39 -2.22 8.43 45.56 0.38 -1.84 16 45 H 0.11 -0.62 8.09 -51.93 -0.42 -1.04 16 46 H 0.13 -0.35 7.09 -51.93 -0.37 -0.72 16 LS Contribution 404.59 15.07 6.10 6.10 Total: 0.00 -11.85 404.59 -7.55 -19.40 By element: Atomic # 1 Polarization: -8.26 SS G_CDS: -3.76 Total: -12.02 kcal Atomic # 6 Polarization: 2.85 SS G_CDS: -2.94 Total: -0.09 kcal Atomic # 7 Polarization: 1.22 SS G_CDS: -0.28 Total: 0.94 kcal Atomic # 8 Polarization: -5.68 SS G_CDS: -1.53 Total: -7.21 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.11 Total: -0.34 kcal Atomic # 14 Polarization: -1.54 SS G_CDS: -5.24 Total: -6.78 kcal Total LS contribution 6.10 Total: 6.10 kcal Total: -11.85 -7.55 -19.40 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -217.673 kcal (2) G-P(sol) polarization free energy of solvation -11.852 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -229.525 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.545 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.397 kcal (6) G-S(sol) free energy of system = (1) + (5) -237.071 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds