Wall clock time and date at job start Tue Mar 9 2021 14:17:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34224 * 116.99933 * 2 1 4 4 O 1.20830 * 120.00076 * 0.02562 * 3 2 1 5 5 C 1.50697 * 120.00108 * 180.02562 * 3 2 1 6 6 N 1.46501 * 112.84990 * 324.47801 * 5 3 2 7 7 C 1.34782 * 120.00002 * 294.07462 * 6 5 3 8 8 O 1.21599 * 119.99694 * 354.99639 * 7 6 5 9 9 C 1.47572 * 120.00158 * 174.71643 * 7 6 5 10 10 C 1.40199 * 119.83127 * 359.72714 * 9 7 6 11 11 C 1.36237 * 120.37642 * 179.75654 * 10 9 7 12 12 C 1.39877 * 119.96238 * 0.52005 * 11 10 9 13 13 C 1.46252 * 133.84420 * 179.71393 * 12 11 10 14 14 C 1.50692 * 126.48734 * 0.03946 * 13 12 11 15 15 O 1.42908 * 109.47070 * 74.99928 * 14 13 12 16 16 Si 1.86295 * 109.47712 * 195.00239 * 14 13 12 17 17 C 1.34458 * 107.03271 * 180.02562 * 13 12 11 18 18 N 1.36557 * 109.98810 * 359.97438 * 17 13 12 19 19 C 1.37833 * 109.86071 * 359.97438 * 18 17 13 20 20 C 1.38638 * 133.38120 * 179.97438 * 19 18 17 21 21 C 1.53780 * 113.61839 * 193.27952 * 5 3 2 22 22 C 1.53777 * 87.08318 * 219.93570 * 21 5 3 23 23 O 1.42898 * 113.61519 * 270.88048 * 22 21 5 24 24 C 1.53005 * 113.61503 * 139.97937 * 22 21 5 25 25 F 1.39899 * 109.46955 * 60.00303 * 24 22 21 26 26 F 1.39903 * 109.47087 * 179.97438 * 24 22 21 27 27 F 1.39899 * 109.47092 * 299.99675 * 24 22 21 28 28 C 1.53781 * 113.68916 * 95.74391 * 5 3 2 29 29 H 1.08998 * 109.47175 * 179.97438 * 1 2 3 30 30 H 1.09005 * 109.46766 * 299.99515 * 1 2 3 31 31 H 1.08999 * 109.47622 * 59.99618 * 1 2 3 32 32 H 0.96997 * 120.00655 * 114.08290 * 6 5 3 33 33 H 1.07995 * 119.81475 * 0.02562 * 10 9 7 34 34 H 1.08007 * 120.02039 * 180.25917 * 11 10 9 35 35 H 1.08999 * 109.47538 * 315.00818 * 14 13 12 36 36 H 0.96705 * 113.99549 * 60.00007 * 15 14 13 37 37 H 1.48496 * 110.00416 * 180.02562 * 16 14 13 38 38 H 1.48504 * 109.99869 * 301.32033 * 16 14 13 39 39 H 1.08006 * 125.00718 * 179.97438 * 17 13 12 40 40 H 0.97004 * 125.07443 * 180.02562 * 18 17 13 41 41 H 1.07999 * 120.16776 * 0.02562 * 20 19 18 42 42 H 1.09002 * 113.61024 * 334.48334 * 21 5 3 43 43 H 1.09004 * 113.61668 * 105.38555 * 21 5 3 44 44 H 0.96699 * 114.00366 * 179.97438 * 23 22 21 45 45 H 1.09007 * 113.61136 * 254.54080 * 28 5 3 46 46 H 1.08997 * 113.61873 * 25.44803 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1922 0.2072 0.7833 7 6 4.0178 0.1610 2.1190 8 8 3.4178 1.0544 2.6851 9 6 4.5496 -0.9770 2.8937 10 6 5.2307 -2.0109 2.2359 11 6 5.7305 -3.0642 2.9407 12 6 5.5555 -3.1230 4.3272 13 6 5.9470 -4.0840 5.3579 14 6 6.7092 -5.3663 5.1444 15 8 8.0859 -5.0677 4.9039 16 14 6.5618 -6.4366 6.6621 17 6 5.4984 -3.6067 6.5322 18 7 4.8528 -2.4192 6.3374 19 6 4.8691 -2.0914 4.9987 20 6 4.3692 -1.0202 4.2745 21 6 4.1098 2.6765 0.3231 22 6 5.1714 2.4295 -0.7617 23 8 6.3573 1.8020 -0.2698 24 6 5.4624 3.6583 -1.6256 25 9 5.9285 4.6987 -0.8146 26 9 6.4356 3.3386 -2.5784 27 9 4.2896 4.0613 -2.2733 28 6 4.1753 1.4482 -1.4020 29 1 -0.3633 -1.0276 -0.0005 30 1 -0.3633 0.5138 0.8901 31 1 -0.3634 0.5139 -0.8899 32 1 4.7323 -0.4664 0.3413 33 1 5.3637 -1.9700 1.1649 34 1 6.2579 -3.8555 2.4286 35 1 6.2969 -5.8953 4.2853 36 1 8.5184 -4.5959 5.6289 37 1 7.3098 -7.7041 6.4644 38 1 7.0916 -5.7141 7.8464 39 1 5.6295 -4.0911 7.4886 40 1 4.4442 -1.8856 7.0369 41 1 3.8404 -0.2243 4.7778 42 1 3.4157 3.4809 0.0797 43 1 4.5240 2.7630 1.3277 44 1 7.0286 1.6436 -0.9475 45 1 4.6424 0.5430 -1.7900 46 1 3.4992 1.9169 -2.1170 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18364788_12335838.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:17:25 Heat of formation + Delta-G solvation = -242.110982 kcal Electronic energy + Delta-G solvation = -41326.401144 eV Core-core repulsion = 35349.197158 eV Total energy + Delta-G solvation = -5977.203986 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 415.117 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -51.31010 -48.83999 -48.78839 -42.79588 -42.36669 -40.87557 -40.08219 -37.96144 -37.72001 -37.49696 -36.61218 -34.39123 -33.24177 -30.85200 -30.69278 -29.54472 -28.53829 -27.58300 -26.48543 -25.78197 -24.73080 -23.62073 -22.58498 -21.84416 -20.84468 -20.79367 -20.25279 -19.64734 -19.54336 -19.39781 -19.03447 -18.44527 -18.11201 -17.65017 -17.45008 -17.22091 -16.95132 -16.40021 -16.27920 -16.21917 -15.92286 -15.68753 -15.62477 -15.59069 -15.21698 -15.16088 -15.10675 -14.97145 -14.96206 -14.91583 -14.78667 -14.73677 -14.51955 -14.40719 -14.13217 -13.87954 -13.70675 -13.62329 -13.21703 -13.04647 -12.76398 -12.61827 -12.47639 -12.39026 -12.19602 -11.93193 -11.87415 -11.75000 -11.57194 -11.20602 -10.76867 -10.47083 -10.42705 -9.34994 -8.77788 -4.81638 -0.32964 0.40797 0.77727 1.22910 1.38757 1.42019 1.58328 1.64436 1.66899 1.87986 2.06094 2.16095 2.23329 2.44668 2.47392 2.65636 2.84653 2.96239 3.21564 3.34993 3.46495 3.58469 3.67680 3.73749 3.87890 3.93321 4.08039 4.14669 4.19364 4.21800 4.23491 4.30367 4.33920 4.45665 4.51643 4.55584 4.58901 4.62174 4.62936 4.83202 4.99641 5.06901 5.16354 5.23095 5.44609 5.53111 5.64462 6.00468 6.29343 6.30805 6.46271 6.52651 6.64366 6.99362 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.351 6.351 3 C 0.469 3.531 4 O -0.522 6.522 5 C 0.168 3.832 6 N -0.674 5.674 7 C 0.571 3.429 8 O -0.571 6.571 9 C -0.132 4.132 10 C -0.102 4.102 11 C -0.081 4.081 12 C -0.077 4.077 13 C -0.223 4.223 14 C -0.046 4.046 15 O -0.553 6.553 16 Si 0.771 3.229 17 C 0.089 3.911 18 N -0.578 5.578 19 C 0.067 3.933 20 C -0.067 4.067 21 C -0.112 4.112 22 C 0.082 3.918 23 O -0.505 6.505 24 C 0.437 3.563 25 F -0.185 7.185 26 F -0.174 7.174 27 F -0.176 7.176 28 C -0.128 4.128 29 H 0.133 0.867 30 H 0.052 0.948 31 H 0.070 0.930 32 H 0.427 0.573 33 H 0.156 0.844 34 H 0.142 0.858 35 H 0.116 0.884 36 H 0.383 0.617 37 H -0.309 1.309 38 H -0.271 1.271 39 H 0.206 0.794 40 H 0.433 0.567 41 H 0.125 0.875 42 H 0.121 0.879 43 H 0.094 0.906 44 H 0.410 0.590 45 H 0.154 0.846 46 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.280 -7.682 -0.023 7.687 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.266 6.266 3 C 0.311 3.689 4 O -0.409 6.409 5 C 0.079 3.921 6 N -0.330 5.330 7 C 0.361 3.639 8 O -0.451 6.451 9 C -0.136 4.136 10 C -0.121 4.121 11 C -0.100 4.100 12 C -0.082 4.082 13 C -0.231 4.231 14 C -0.155 4.155 15 O -0.360 6.360 16 Si 0.675 3.325 17 C -0.040 4.040 18 N -0.181 5.181 19 C -0.040 4.040 20 C -0.088 4.088 21 C -0.151 4.151 22 C 0.038 3.962 23 O -0.315 6.315 24 C 0.383 3.617 25 F -0.166 7.166 26 F -0.156 7.156 27 F -0.158 7.158 28 C -0.165 4.165 29 H 0.151 0.849 30 H 0.071 0.929 31 H 0.089 0.911 32 H 0.269 0.731 33 H 0.174 0.826 34 H 0.160 0.840 35 H 0.133 0.867 36 H 0.232 0.768 37 H -0.237 1.237 38 H -0.197 1.197 39 H 0.222 0.778 40 H 0.273 0.727 41 H 0.143 0.857 42 H 0.139 0.861 43 H 0.113 0.887 44 H 0.264 0.736 45 H 0.172 0.828 46 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -0.459 -7.351 1.084 7.445 hybrid contribution 1.000 1.457 -0.344 1.800 sum 0.540 -5.894 0.740 5.965 Atomic orbital electron populations 1.23582 0.74727 1.05864 1.02465 1.86503 1.24893 1.32140 1.83068 1.23846 0.91721 0.81773 0.71563 1.90690 1.66905 1.37369 1.45957 1.20685 0.84485 0.90534 0.96438 1.45123 1.52577 1.29295 1.05960 1.18443 0.78141 0.85393 0.81962 1.90812 1.43518 1.39984 1.70802 1.19275 1.05084 0.96269 0.92964 1.20909 0.97552 0.92704 1.00938 1.20422 0.99101 0.98777 0.91676 1.19553 0.99723 0.94705 0.94228 1.20748 1.10234 1.00151 0.91951 1.24529 0.81093 0.97107 1.12814 1.86577 1.23327 1.79285 1.46856 0.94183 0.89853 0.75087 0.73330 1.22283 0.95092 0.86530 1.00127 1.41811 1.49369 1.20581 1.06379 1.18098 1.03540 0.97275 0.85087 1.20095 0.99436 0.96430 0.92838 1.23441 0.94987 0.96161 1.00482 1.23053 0.88732 0.89420 0.94980 1.86695 1.26308 1.79112 1.39363 1.21174 0.74524 0.86346 0.79682 1.93220 1.88877 1.61556 1.72945 1.93210 1.63689 1.92491 1.66168 1.93209 1.48187 1.91779 1.82596 1.24110 0.96974 1.02545 0.92902 0.84913 0.92941 0.91105 0.73096 0.82634 0.83988 0.86653 0.76772 1.23729 1.19654 0.77795 0.72684 0.85667 0.86126 0.88711 0.73622 0.82813 0.84983 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 113.37 1.20 1.21 16 2 O -0.35 -1.56 10.41 -51.36 -0.53 -2.09 16 3 C 0.47 3.28 6.59 71.23 0.47 3.75 16 4 O -0.52 -6.75 15.66 21.95 0.34 -6.41 16 5 C 0.17 0.20 1.00 3.38 0.00 0.21 16 6 N -0.67 0.57 4.47 -427.00 -1.91 -1.34 16 7 C 0.57 3.44 7.31 86.71 0.63 4.08 16 8 O -0.57 -8.11 14.85 -4.03 -0.06 -8.17 16 9 C -0.13 -0.46 5.87 -20.08 -0.12 -0.58 16 10 C -0.10 0.16 9.46 22.28 0.21 0.37 16 11 C -0.08 0.00 10.03 22.20 0.22 0.22 16 12 C -0.08 -0.15 6.35 -20.14 -0.13 -0.28 16 13 C -0.22 0.37 5.57 -18.65 -0.10 0.26 16 14 C -0.05 0.12 3.06 71.23 0.22 0.34 16 15 O -0.55 -0.61 12.88 -148.98 -1.92 -2.53 16 16 Si 0.77 -4.11 30.82 68.60 2.11 -1.99 16 17 C 0.09 -0.48 10.43 83.09 0.87 0.39 16 18 N -0.58 2.09 6.07 -187.71 -1.14 0.96 16 19 C 0.07 0.14 7.26 38.95 0.28 0.42 16 20 C -0.07 -0.31 9.61 22.63 0.22 -0.09 16 21 C -0.11 -0.44 5.98 31.12 0.19 -0.26 16 22 C 0.08 -0.21 1.36 -10.27 -0.01 -0.23 16 23 O -0.51 2.66 12.91 -148.98 -1.92 0.73 16 24 C 0.44 0.14 2.85 71.98 0.21 0.34 16 25 F -0.18 -0.94 17.18 44.97 0.77 -0.16 16 26 F -0.17 0.25 16.65 44.97 0.75 1.00 16 27 F -0.18 -0.39 15.75 44.97 0.71 0.32 16 28 C -0.13 0.81 6.63 31.12 0.21 1.02 16 29 H 0.13 -0.75 8.14 -2.39 -0.02 -0.77 16 30 H 0.05 0.17 8.13 -2.38 -0.02 0.15 16 31 H 0.07 -0.03 8.13 -2.39 -0.02 -0.05 16 32 H 0.43 -3.40 6.67 -92.71 -0.62 -4.02 16 33 H 0.16 -1.36 6.37 -2.91 -0.02 -1.38 16 34 H 0.14 -0.39 8.06 -2.91 -0.02 -0.42 16 35 H 0.12 -0.36 7.96 -2.39 -0.02 -0.38 16 36 H 0.38 -1.70 8.70 -74.05 -0.64 -2.34 16 37 H -0.31 -1.13 7.11 99.48 0.71 -0.42 16 38 H -0.27 0.98 7.00 99.48 0.70 1.67 16 39 H 0.21 -2.44 6.27 -2.91 -0.02 -2.45 16 40 H 0.43 -3.78 8.96 -92.71 -0.83 -4.61 16 41 H 0.13 0.71 7.62 -2.91 -0.02 0.69 16 42 H 0.12 0.71 7.09 -2.39 -0.02 0.69 16 43 H 0.09 0.79 7.19 -2.39 -0.02 0.77 16 44 H 0.41 -5.40 8.43 -74.06 -0.62 -6.02 16 45 H 0.15 -2.18 8.09 -2.38 -0.02 -2.20 16 46 H 0.13 -0.85 7.09 -2.39 -0.02 -0.87 16 Total: 0.00 -30.69 404.59 0.21 -30.47 By element: Atomic # 1 Polarization: -20.41 SS G_CDS: -1.54 Total: -21.95 kcal Atomic # 6 Polarization: 6.62 SS G_CDS: 4.56 Total: 11.18 kcal Atomic # 7 Polarization: 2.66 SS G_CDS: -3.05 Total: -0.39 kcal Atomic # 8 Polarization: -14.38 SS G_CDS: -4.09 Total: -18.47 kcal Atomic # 9 Polarization: -1.07 SS G_CDS: 2.23 Total: 1.16 kcal Atomic # 14 Polarization: -4.11 SS G_CDS: 2.11 Total: -1.99 kcal Total: -30.69 0.21 -30.47 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_12335838.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -211.637 kcal (2) G-P(sol) polarization free energy of solvation -30.686 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -242.323 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.212 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.474 kcal (6) G-S(sol) free energy of system = (1) + (5) -242.111 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds