Wall clock time and date at job start Tue Mar 9 2021 14:17:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34221 * 117.00365 * 2 1 4 4 O 1.20828 * 119.99826 * 0.02562 * 3 2 1 5 5 C 1.50698 * 120.00365 * 180.02562 * 3 2 1 6 6 N 1.46501 * 112.84782 * 35.49665 * 5 3 2 7 7 C 1.34769 * 120.00275 * 66.99158 * 6 5 3 8 8 O 1.21553 * 120.00066 * 354.93043 * 7 6 5 9 9 C 1.47850 * 120.00504 * 174.92874 * 7 6 5 10 10 C 1.39549 * 120.13391 * 0.02562 * 9 7 6 11 11 C 1.38074 * 119.83961 * 180.02562 * 10 9 7 12 12 Br 1.89098 * 119.93650 * 179.97438 * 11 10 9 13 13 C 1.38428 * 120.12533 * 359.97438 * 11 10 9 14 14 C 1.38358 * 120.28089 * 359.97438 * 13 11 10 15 15 C 1.50698 * 119.92305 * 180.02562 * 14 13 11 16 16 O 1.42895 * 109.47573 * 119.99672 * 15 14 13 17 17 Si 1.86300 * 109.47014 * 359.97438 * 15 14 13 18 18 C 1.37942 * 120.15876 * 0.28690 * 14 13 11 19 19 C 1.53784 * 113.69113 * 264.22894 * 5 3 2 20 20 C 1.53785 * 87.07995 * 220.00309 * 19 5 3 21 21 O 1.42900 * 113.61423 * 270.88204 * 20 19 5 22 22 C 1.53004 * 113.68478 * 139.98902 * 20 19 5 23 23 F 1.39897 * 109.47268 * 322.46807 * 22 20 19 24 24 F 1.39896 * 109.46722 * 82.46918 * 22 20 19 25 25 F 1.39899 * 109.46563 * 202.46318 * 22 20 19 26 26 C 1.53779 * 113.61724 * 166.69115 * 5 3 2 27 27 H 1.09006 * 109.47152 * 59.99543 * 1 2 3 28 28 H 1.08995 * 109.47582 * 179.97438 * 1 2 3 29 29 H 1.08994 * 109.46863 * 300.00170 * 1 2 3 30 30 H 0.97001 * 119.99768 * 246.99675 * 6 5 3 31 31 H 1.08000 * 120.07897 * 359.96913 * 10 9 7 32 32 H 1.07994 * 119.85790 * 180.02562 * 13 11 10 33 33 H 1.09002 * 109.47263 * 239.99800 * 15 14 13 34 34 H 0.96705 * 113.99673 * 299.99896 * 16 15 14 35 35 H 1.48502 * 109.99770 * 58.68569 * 17 15 14 36 36 H 1.48501 * 110.00442 * 180.02562 * 17 15 14 37 37 H 1.08004 * 120.06700 * 179.70561 * 18 14 13 38 38 H 1.09004 * 113.61283 * 334.55429 * 19 5 3 39 39 H 1.09004 * 113.61308 * 105.45554 * 19 5 3 40 40 H 0.96699 * 113.99811 * 277.49414 * 21 20 19 41 41 H 1.08996 * 113.61352 * 254.61549 * 26 5 3 42 42 H 1.09000 * 113.61517 * 25.43266 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 -0.0006 6 7 4.1917 0.2070 -0.7850 7 6 4.0340 0.1730 -2.1230 8 8 3.2990 0.9725 -2.6689 9 6 4.7550 -0.8368 -2.9270 10 6 5.5991 -1.7565 -2.3032 11 6 6.2699 -2.6966 -3.0600 12 35 7.4150 -3.9436 -2.2176 13 6 6.1057 -2.7279 -4.4341 14 6 5.2692 -1.8193 -5.0577 15 6 5.0960 -1.8611 -6.5541 16 8 3.7212 -2.0916 -6.8683 17 14 6.1342 -3.2368 -7.2612 18 6 4.5976 -0.8716 -4.3136 19 6 4.1766 1.4482 1.4003 20 6 5.1722 2.4294 0.7591 21 8 6.3576 1.8016 0.2664 22 6 5.4653 3.6588 1.6214 23 9 4.2937 4.0638 2.2698 24 9 6.4387 3.3389 2.5739 25 9 5.9317 4.6977 0.8088 26 6 4.1097 2.6763 -0.3249 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3633 0.5138 0.8899 30 1 4.7191 -0.4755 -0.3412 31 1 5.7281 -1.7323 -1.2312 32 1 6.6321 -3.4654 -5.0218 33 1 5.4122 -0.9103 -6.9832 34 1 3.3714 -2.9220 -6.5173 35 1 5.7346 -4.5348 -6.6606 36 1 5.9727 -3.2884 -8.7365 37 1 3.9487 -0.1600 -4.8024 38 1 3.5010 1.9169 2.1159 39 1 4.6439 0.5430 1.7881 40 1 7.0296 1.6438 0.9436 41 1 4.5231 2.7626 -1.3297 42 1 3.4153 3.4807 -0.0823 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18364788_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:17:47 Heat of formation + Delta-G solvation = -266.791982 kcal Electronic energy + Delta-G solvation = -38549.782790 eV Core-core repulsion = 32709.106363 eV Total energy + Delta-G solvation = -5840.676426 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.016 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -51.32560 -48.87456 -48.76444 -42.80807 -41.35169 -40.59955 -39.65371 -37.86393 -37.59983 -36.73012 -34.69173 -33.69812 -32.94061 -30.54878 -29.81840 -28.60359 -27.73621 -27.13279 -26.06458 -25.07976 -22.90116 -22.60621 -21.98510 -20.86106 -20.32214 -19.66802 -19.57634 -19.35291 -18.93342 -18.10763 -17.98671 -17.69105 -17.48992 -17.29996 -16.94378 -16.50413 -16.44439 -16.09561 -15.81773 -15.75671 -15.62820 -15.39535 -15.22107 -15.10557 -15.03034 -14.96780 -14.92195 -14.87087 -14.52334 -14.31405 -14.25112 -14.11108 -13.87557 -13.61576 -13.34283 -13.23920 -13.08755 -12.87602 -12.38685 -12.33907 -12.04702 -11.90724 -11.87001 -11.82901 -11.70711 -11.54544 -11.24496 -10.79414 -10.53961 -10.33130 -9.98886 -5.09337 -0.59649 -0.24329 0.34022 0.88852 1.09588 1.18774 1.40743 1.46315 1.54394 1.65986 1.85542 2.07652 2.25364 2.37131 2.42644 2.56299 2.81220 3.10619 3.13699 3.20452 3.26268 3.30950 3.58531 3.67320 3.77065 3.88244 3.90028 4.01279 4.07858 4.12488 4.13197 4.19363 4.22682 4.30039 4.44371 4.55043 4.56757 4.66095 4.84849 4.94185 4.98516 5.26478 5.30845 5.85522 6.06989 6.25531 6.58008 6.86171 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.350 6.350 3 C 0.474 3.526 4 O -0.487 6.487 5 C 0.172 3.828 6 N -0.691 5.691 7 C 0.571 3.429 8 O -0.516 6.516 9 C -0.124 4.124 10 C -0.049 4.049 11 C -0.094 4.094 12 Br -0.031 7.031 13 C -0.061 4.061 14 C -0.118 4.118 15 C -0.074 4.074 16 O -0.524 6.524 17 Si 0.680 3.320 18 C -0.015 4.015 19 C -0.144 4.144 20 C 0.067 3.933 21 O -0.501 6.501 22 C 0.439 3.561 23 F -0.170 7.170 24 F -0.179 7.179 25 F -0.169 7.169 26 C -0.101 4.101 27 H 0.066 0.934 28 H 0.104 0.896 29 H 0.066 0.934 30 H 0.411 0.589 31 H 0.139 0.861 32 H 0.143 0.857 33 H 0.126 0.874 34 H 0.377 0.623 35 H -0.255 1.255 36 H -0.250 1.250 37 H 0.149 0.851 38 H 0.129 0.871 39 H 0.115 0.885 40 H 0.394 0.606 41 H 0.114 0.886 42 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.658 -4.930 2.830 6.760 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.266 6.266 3 C 0.314 3.686 4 O -0.372 6.372 5 C 0.083 3.917 6 N -0.347 5.347 7 C 0.358 3.642 8 O -0.391 6.391 9 C -0.128 4.128 10 C -0.069 4.069 11 C -0.174 4.174 12 Br 0.054 6.946 13 C -0.081 4.081 14 C -0.119 4.119 15 C -0.184 4.184 16 O -0.330 6.330 17 Si 0.580 3.420 18 C -0.035 4.035 19 C -0.182 4.182 20 C 0.023 3.977 21 O -0.308 6.308 22 C 0.384 3.616 23 F -0.152 7.152 24 F -0.160 7.160 25 F -0.150 7.150 26 C -0.139 4.139 27 H 0.085 0.915 28 H 0.122 0.878 29 H 0.085 0.915 30 H 0.249 0.751 31 H 0.157 0.843 32 H 0.160 0.840 33 H 0.144 0.856 34 H 0.225 0.775 35 H -0.179 1.179 36 H -0.175 1.175 37 H 0.166 0.834 38 H 0.147 0.853 39 H 0.133 0.867 40 H 0.244 0.756 41 H 0.133 0.867 42 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 3.087 -4.642 1.467 5.765 hybrid contribution -0.877 -0.153 1.150 1.454 sum 2.210 -4.795 2.616 5.893 Atomic orbital electron populations 1.23368 0.75535 1.04124 1.02937 1.86489 1.23956 1.32640 1.83484 1.23258 0.90656 0.82061 0.72656 1.90718 1.65919 1.36303 1.44223 1.20664 0.85899 0.90688 0.94448 1.45303 1.53972 1.28947 1.06437 1.18121 0.80868 0.83781 0.81390 1.90869 1.36782 1.40331 1.71133 1.19766 1.00777 0.97942 0.94361 1.21270 0.93417 0.92161 1.00054 1.21634 1.01813 0.99045 0.94908 1.96851 1.62253 1.55840 1.79623 1.21231 0.96313 0.97642 0.92899 1.20311 0.98309 0.96247 0.97024 1.25056 0.89147 1.11757 0.92409 1.86649 1.23434 1.44473 1.78483 0.95085 0.89036 0.76963 0.80944 1.21289 0.94839 0.95652 0.91683 1.24055 0.97931 1.01491 0.94688 1.23306 0.88486 0.89674 0.96253 1.86694 1.26154 1.79552 1.38423 1.20937 0.74755 0.86302 0.79601 1.93224 1.47906 1.91594 1.82434 1.93204 1.63897 1.92592 1.66349 1.93255 1.88681 1.60752 1.72346 1.23482 0.93999 0.95664 1.00706 0.91528 0.87754 0.91531 0.75085 0.84300 0.84007 0.85619 0.77472 1.17941 1.17482 0.83350 0.85260 0.86680 0.75559 0.86745 0.84747 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.06 16 2 O -0.35 -0.59 10.41 -39.24 -0.41 -1.00 16 3 C 0.47 1.15 6.42 36.00 0.23 1.38 16 4 O -0.49 -2.43 15.66 -18.75 -0.29 -2.72 16 5 C 0.17 -0.07 1.00 -132.16 -0.13 -0.20 16 6 N -0.69 0.99 4.47 -48.86 -0.22 0.77 16 7 C 0.57 0.69 7.25 -12.33 -0.09 0.60 16 8 O -0.52 -2.52 15.07 5.32 0.08 -2.44 16 9 C -0.12 0.03 5.87 -104.97 -0.62 -0.59 16 10 C -0.05 0.10 9.27 -39.15 -0.36 -0.27 16 11 C -0.09 0.15 6.22 -39.57 -0.25 -0.10 16 12 Br -0.03 0.05 33.69 -68.01 -2.29 -2.24 16 13 C -0.06 0.11 8.41 -39.47 -0.33 -0.23 16 14 C -0.12 0.14 5.38 -104.69 -0.56 -0.43 16 15 C -0.07 0.10 2.82 36.00 0.10 0.21 16 16 O -0.52 -0.13 12.77 -35.23 -0.45 -0.58 16 17 Si 0.68 -1.38 29.78 -169.99 -5.06 -6.45 16 18 C -0.02 0.00 9.16 -39.18 -0.36 -0.36 16 19 C -0.14 0.49 6.64 -25.91 -0.17 0.31 16 20 C 0.07 -0.14 1.36 -89.80 -0.12 -0.26 16 21 O -0.50 1.66 12.91 -35.23 -0.45 1.21 16 22 C 0.44 -0.27 2.85 37.16 0.11 -0.17 16 23 F -0.17 -0.05 15.77 2.25 0.04 -0.02 16 24 F -0.18 0.18 16.65 2.25 0.04 0.21 16 25 F -0.17 -0.22 17.18 2.25 0.04 -0.19 16 26 C -0.10 -0.02 6.02 -25.92 -0.16 -0.18 16 27 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 28 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 29 H 0.07 -0.04 8.13 -51.93 -0.42 -0.47 16 30 H 0.41 -1.78 6.72 -40.82 -0.27 -2.05 16 31 H 0.14 -0.62 6.42 -52.49 -0.34 -0.96 16 32 H 0.14 -0.43 4.86 -52.49 -0.26 -0.69 16 33 H 0.13 -0.27 7.96 -51.93 -0.41 -0.68 16 34 H 0.38 -1.00 8.70 45.56 0.40 -0.60 16 35 H -0.25 0.08 7.11 56.52 0.40 0.48 16 36 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 37 H 0.15 0.18 7.65 -52.48 -0.40 -0.22 16 38 H 0.13 -0.44 7.10 -51.93 -0.37 -0.81 16 39 H 0.11 -0.71 8.10 -51.93 -0.42 -1.13 16 40 H 0.39 -2.63 8.42 45.56 0.38 -2.25 16 41 H 0.11 0.17 7.41 -51.93 -0.38 -0.21 16 42 H 0.13 0.10 7.09 -51.93 -0.37 -0.27 16 LS Contribution 392.63 15.07 5.92 5.92 Total: 0.00 -9.96 392.63 -7.62 -17.59 By element: Atomic # 1 Polarization: -7.94 SS G_CDS: -2.91 Total: -10.85 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: -1.65 Total: 0.78 kcal Atomic # 7 Polarization: 0.99 SS G_CDS: -0.22 Total: 0.77 kcal Atomic # 8 Polarization: -4.00 SS G_CDS: -1.53 Total: -5.53 kcal Atomic # 9 Polarization: -0.10 SS G_CDS: 0.11 Total: 0.01 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.06 Total: -6.45 kcal Atomic # 35 Polarization: 0.05 SS G_CDS: -2.29 Total: -2.24 kcal Total LS contribution 5.92 Total: 5.92 kcal Total: -9.96 -7.62 -17.59 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -249.205 kcal (2) G-P(sol) polarization free energy of solvation -9.963 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -259.168 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.624 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.587 kcal (6) G-S(sol) free energy of system = (1) + (5) -266.792 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds