Wall clock time and date at job start Tue Mar 9 2021 14:17:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34221 * 117.00365 * 2 1 4 4 O 1.20828 * 119.99826 * 0.02562 * 3 2 1 5 5 C 1.50698 * 120.00365 * 180.02562 * 3 2 1 6 6 N 1.46501 * 112.84782 * 35.49665 * 5 3 2 7 7 C 1.34769 * 120.00275 * 66.99158 * 6 5 3 8 8 O 1.21553 * 120.00066 * 354.93043 * 7 6 5 9 9 C 1.47850 * 120.00504 * 174.92874 * 7 6 5 10 10 C 1.39549 * 120.13391 * 0.02562 * 9 7 6 11 11 C 1.38074 * 119.83961 * 180.02562 * 10 9 7 12 12 Br 1.89098 * 119.93650 * 179.97438 * 11 10 9 13 13 C 1.38428 * 120.12533 * 359.97438 * 11 10 9 14 14 C 1.38358 * 120.28089 * 359.97438 * 13 11 10 15 15 C 1.50698 * 119.92305 * 180.02562 * 14 13 11 16 16 O 1.42895 * 109.47573 * 119.99672 * 15 14 13 17 17 Si 1.86300 * 109.47014 * 359.97438 * 15 14 13 18 18 C 1.37942 * 120.15876 * 0.28690 * 14 13 11 19 19 C 1.53784 * 113.69113 * 264.22894 * 5 3 2 20 20 C 1.53785 * 87.07995 * 220.00309 * 19 5 3 21 21 O 1.42900 * 113.61423 * 270.88204 * 20 19 5 22 22 C 1.53004 * 113.68478 * 139.98902 * 20 19 5 23 23 F 1.39897 * 109.47268 * 322.46807 * 22 20 19 24 24 F 1.39896 * 109.46722 * 82.46918 * 22 20 19 25 25 F 1.39899 * 109.46563 * 202.46318 * 22 20 19 26 26 C 1.53779 * 113.61724 * 166.69115 * 5 3 2 27 27 H 1.09006 * 109.47152 * 59.99543 * 1 2 3 28 28 H 1.08995 * 109.47582 * 179.97438 * 1 2 3 29 29 H 1.08994 * 109.46863 * 300.00170 * 1 2 3 30 30 H 0.97001 * 119.99768 * 246.99675 * 6 5 3 31 31 H 1.08000 * 120.07897 * 359.96913 * 10 9 7 32 32 H 1.07994 * 119.85790 * 180.02562 * 13 11 10 33 33 H 1.09002 * 109.47263 * 239.99800 * 15 14 13 34 34 H 0.96705 * 113.99673 * 299.99896 * 16 15 14 35 35 H 1.48502 * 109.99770 * 58.68569 * 17 15 14 36 36 H 1.48501 * 110.00442 * 180.02562 * 17 15 14 37 37 H 1.08004 * 120.06700 * 179.70561 * 18 14 13 38 38 H 1.09004 * 113.61283 * 334.55429 * 19 5 3 39 39 H 1.09004 * 113.61308 * 105.45554 * 19 5 3 40 40 H 0.96699 * 113.99811 * 277.49414 * 21 20 19 41 41 H 1.08996 * 113.61352 * 254.61549 * 26 5 3 42 42 H 1.09000 * 113.61517 * 25.43266 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 -0.0006 6 7 4.1917 0.2070 -0.7850 7 6 4.0340 0.1730 -2.1230 8 8 3.2990 0.9725 -2.6689 9 6 4.7550 -0.8368 -2.9270 10 6 5.5991 -1.7565 -2.3032 11 6 6.2699 -2.6966 -3.0600 12 35 7.4150 -3.9436 -2.2176 13 6 6.1057 -2.7279 -4.4341 14 6 5.2692 -1.8193 -5.0577 15 6 5.0960 -1.8611 -6.5541 16 8 3.7212 -2.0916 -6.8683 17 14 6.1342 -3.2368 -7.2612 18 6 4.5976 -0.8716 -4.3136 19 6 4.1766 1.4482 1.4003 20 6 5.1722 2.4294 0.7591 21 8 6.3576 1.8016 0.2664 22 6 5.4653 3.6588 1.6214 23 9 4.2937 4.0638 2.2698 24 9 6.4387 3.3389 2.5739 25 9 5.9317 4.6977 0.8088 26 6 4.1097 2.6763 -0.3249 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3633 0.5138 0.8899 30 1 4.7191 -0.4755 -0.3412 31 1 5.7281 -1.7323 -1.2312 32 1 6.6321 -3.4654 -5.0218 33 1 5.4122 -0.9103 -6.9832 34 1 3.3714 -2.9220 -6.5173 35 1 5.7346 -4.5348 -6.6606 36 1 5.9727 -3.2884 -8.7365 37 1 3.9487 -0.1600 -4.8024 38 1 3.5010 1.9169 2.1159 39 1 4.6439 0.5430 1.7881 40 1 7.0296 1.6438 0.9436 41 1 4.5231 2.7626 -1.3297 42 1 3.4153 3.4807 -0.0823 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18364788_12335870.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:17:45 Heat of formation + Delta-G solvation = -269.482863 kcal Electronic energy + Delta-G solvation = -38549.899475 eV Core-core repulsion = 32709.106363 eV Total energy + Delta-G solvation = -5840.793112 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.016 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -51.30035 -48.83153 -48.77811 -42.81847 -41.35813 -40.61150 -39.66397 -37.82585 -37.73395 -36.64626 -34.67350 -33.60535 -32.85715 -30.43642 -29.81370 -28.58477 -27.61477 -27.04285 -26.03916 -25.08906 -22.81667 -22.60849 -21.92220 -20.87166 -20.25566 -19.65223 -19.54244 -19.31647 -18.95529 -18.19146 -17.94402 -17.63059 -17.47040 -17.32184 -16.87880 -16.40906 -16.35747 -16.13414 -15.79260 -15.75954 -15.61738 -15.34942 -15.20592 -15.08910 -14.96352 -14.95223 -14.92142 -14.81128 -14.52012 -14.25490 -14.20599 -14.08561 -13.73488 -13.64505 -13.28132 -13.23519 -13.04141 -12.76856 -12.40163 -12.29408 -11.96040 -11.94812 -11.90828 -11.82299 -11.58763 -11.49746 -11.25907 -10.73735 -10.58553 -10.23468 -9.88745 -4.96626 -0.53311 -0.14179 0.46272 0.76700 1.19129 1.22677 1.42472 1.55713 1.57554 1.66858 1.94025 2.21475 2.38454 2.47101 2.48827 2.65413 2.88197 3.17818 3.25928 3.27309 3.34980 3.43014 3.62076 3.80195 3.88296 3.96864 4.04922 4.16862 4.19934 4.20706 4.21049 4.28356 4.32292 4.44951 4.53514 4.55382 4.60075 4.77241 4.93282 4.97939 5.07996 5.15490 5.37701 6.16564 6.30928 6.42870 6.44372 6.86724 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.352 6.352 3 C 0.470 3.530 4 O -0.522 6.522 5 C 0.168 3.832 6 N -0.673 5.673 7 C 0.569 3.431 8 O -0.562 6.562 9 C -0.132 4.132 10 C -0.037 4.037 11 C -0.098 4.098 12 Br -0.026 7.026 13 C -0.058 4.058 14 C -0.114 4.114 15 C -0.084 4.084 16 O -0.546 6.546 17 Si 0.762 3.238 18 C -0.028 4.028 19 C -0.128 4.128 20 C 0.084 3.916 21 O -0.503 6.503 22 C 0.437 3.563 23 F -0.177 7.177 24 F -0.174 7.174 25 F -0.184 7.184 26 C -0.112 4.112 27 H 0.051 0.949 28 H 0.132 0.868 29 H 0.071 0.929 30 H 0.427 0.573 31 H 0.167 0.833 32 H 0.157 0.843 33 H 0.129 0.871 34 H 0.388 0.612 35 H -0.271 1.271 36 H -0.299 1.299 37 H 0.129 0.871 38 H 0.132 0.868 39 H 0.155 0.845 40 H 0.411 0.589 41 H 0.095 0.905 42 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.264 -6.825 4.446 9.698 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.268 6.268 3 C 0.311 3.689 4 O -0.409 6.409 5 C 0.078 3.922 6 N -0.329 5.329 7 C 0.358 3.642 8 O -0.440 6.440 9 C -0.136 4.136 10 C -0.057 4.057 11 C -0.178 4.178 12 Br 0.060 6.940 13 C -0.078 4.078 14 C -0.116 4.116 15 C -0.193 4.193 16 O -0.354 6.354 17 Si 0.666 3.334 18 C -0.048 4.048 19 C -0.165 4.165 20 C 0.040 3.960 21 O -0.313 6.313 22 C 0.382 3.618 23 F -0.159 7.159 24 F -0.155 7.155 25 F -0.165 7.165 26 C -0.150 4.150 27 H 0.070 0.930 28 H 0.150 0.850 29 H 0.089 0.911 30 H 0.269 0.731 31 H 0.184 0.816 32 H 0.174 0.826 33 H 0.147 0.853 34 H 0.237 0.763 35 H -0.197 1.197 36 H -0.227 1.227 37 H 0.147 0.853 38 H 0.150 0.850 39 H 0.173 0.827 40 H 0.265 0.735 41 H 0.114 0.886 42 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 4.730 -6.568 3.146 8.684 hybrid contribution -1.397 0.425 0.597 1.578 sum 3.333 -6.144 3.742 7.928 Atomic orbital electron populations 1.23564 0.74780 1.05782 1.02448 1.86486 1.24845 1.32290 1.83133 1.23852 0.91780 0.81738 0.71524 1.90695 1.66928 1.37355 1.45951 1.20726 0.84413 0.90475 0.96555 1.45143 1.53258 1.28894 1.05602 1.18398 0.80299 0.83405 0.82110 1.90851 1.38898 1.42172 1.72119 1.19664 1.01576 0.98368 0.94013 1.21472 0.91995 0.90905 1.01321 1.21726 1.01884 0.99184 0.94995 1.96869 1.62045 1.55625 1.79454 1.21389 0.95788 0.97390 0.93206 1.20229 0.98356 0.96106 0.96877 1.25303 0.88683 1.12723 0.92568 1.86617 1.24465 1.45497 1.78840 0.94190 0.87570 0.74843 0.76830 1.21228 0.95290 0.95979 0.92268 1.24118 0.97001 1.02639 0.92791 1.23017 0.88773 0.89360 0.94835 1.86677 1.26193 1.79047 1.39380 1.21174 0.74526 0.86377 0.79677 1.93210 1.48335 1.91744 1.82588 1.93211 1.63665 1.92478 1.66179 1.93224 1.88860 1.61642 1.72819 1.23443 0.95034 0.95976 1.00595 0.93029 0.85022 0.91076 0.73114 0.81610 0.82618 0.85279 0.76266 1.19714 1.22664 0.85318 0.85034 0.82708 0.73507 0.88594 0.86053 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 113.37 1.20 1.21 16 2 O -0.35 -1.33 10.41 -51.33 -0.53 -1.87 16 3 C 0.47 2.80 6.42 71.24 0.46 3.26 16 4 O -0.52 -6.36 15.66 21.96 0.34 -6.01 16 5 C 0.17 -0.11 1.00 3.38 0.00 -0.10 16 6 N -0.67 2.24 4.47 -426.77 -1.91 0.33 16 7 C 0.57 1.86 7.25 86.79 0.63 2.49 16 8 O -0.56 -6.88 15.07 -3.88 -0.06 -6.94 16 9 C -0.13 0.04 5.87 -20.09 -0.12 -0.08 16 10 C -0.04 0.20 9.27 22.55 0.21 0.41 16 11 C -0.10 0.45 6.22 22.28 0.14 0.59 16 12 Br -0.03 0.13 33.69 -20.37 -0.69 -0.56 16 13 C -0.06 0.26 8.41 22.34 0.19 0.44 16 14 C -0.11 0.24 5.38 -19.91 -0.11 0.14 16 15 C -0.08 0.19 2.82 71.24 0.20 0.39 16 16 O -0.55 -0.88 12.77 -148.98 -1.90 -2.78 16 17 Si 0.76 -3.13 29.78 68.60 2.04 -1.08 16 18 C -0.03 -0.04 9.16 22.53 0.21 0.16 16 19 C -0.13 1.04 6.64 31.12 0.21 1.25 16 20 C 0.08 -0.40 1.36 -10.26 -0.01 -0.42 16 21 O -0.50 4.10 12.91 -148.98 -1.92 2.17 16 22 C 0.44 -0.59 2.85 71.98 0.21 -0.38 16 23 F -0.18 -0.18 15.77 44.97 0.71 0.53 16 24 F -0.17 0.53 16.65 44.97 0.75 1.28 16 25 F -0.18 -0.63 17.18 44.97 0.77 0.14 16 26 C -0.11 -0.21 6.02 31.12 0.19 -0.02 16 27 H 0.05 0.18 8.13 -2.38 -0.02 0.16 16 28 H 0.13 -0.75 8.14 -2.39 -0.02 -0.77 16 29 H 0.07 -0.04 8.13 -2.39 -0.02 -0.06 16 30 H 0.43 -4.60 6.72 -92.71 -0.62 -5.22 16 31 H 0.17 -1.94 6.42 -2.91 -0.02 -1.96 16 32 H 0.16 -1.18 4.86 -2.91 -0.01 -1.19 16 33 H 0.13 -0.43 7.96 -2.39 -0.02 -0.45 16 34 H 0.39 -1.72 8.70 -74.05 -0.64 -2.36 16 35 H -0.27 0.37 7.11 99.48 0.71 1.08 16 36 H -0.30 -1.22 7.11 99.48 0.71 -0.51 16 37 H 0.13 0.68 7.65 -2.91 -0.02 0.66 16 38 H 0.13 -1.03 7.10 -2.38 -0.02 -1.04 16 39 H 0.16 -2.49 8.10 -2.39 -0.02 -2.51 16 40 H 0.41 -6.50 8.42 -74.06 -0.62 -7.12 16 41 H 0.10 0.52 7.41 -2.39 -0.02 0.50 16 42 H 0.12 0.51 7.09 -2.39 -0.02 0.49 16 Total: 0.00 -26.26 392.63 0.51 -25.75 By element: Atomic # 1 Polarization: -19.62 SS G_CDS: -0.68 Total: -20.31 kcal Atomic # 6 Polarization: 5.75 SS G_CDS: 3.59 Total: 9.34 kcal Atomic # 7 Polarization: 2.24 SS G_CDS: -1.91 Total: 0.33 kcal Atomic # 8 Polarization: -11.36 SS G_CDS: -4.07 Total: -15.43 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 2.23 Total: 1.95 kcal Atomic # 14 Polarization: -3.13 SS G_CDS: 2.04 Total: -1.08 kcal Atomic # 35 Polarization: 0.13 SS G_CDS: -0.69 Total: -0.56 kcal Total: -26.26 0.51 -25.75 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_12335870.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -243.731 kcal (2) G-P(sol) polarization free energy of solvation -26.265 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -269.996 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.513 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.752 kcal (6) G-S(sol) free energy of system = (1) + (5) -269.483 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds