Wall clock time and date at job start Tue Mar 9 2021 14:18:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34227 * 117.00084 * 2 1 4 4 O 1.20820 * 120.00056 * 0.02562 * 3 2 1 5 5 C 1.50703 * 120.00200 * 180.02562 * 3 2 1 6 6 N 1.46502 * 112.84594 * 323.54960 * 5 3 2 7 7 C 1.34771 * 120.00172 * 293.37241 * 6 5 3 8 8 O 1.21575 * 120.00091 * 5.17034 * 7 6 5 9 9 C 1.47673 * 119.99832 * 185.17114 * 7 6 5 10 10 C 1.40001 * 120.45304 * 5.42254 * 9 7 6 11 11 N 1.31315 * 121.37440 * 179.72915 * 10 9 7 12 12 C 1.32822 * 121.88844 * 0.51136 * 11 10 9 13 13 N 1.37153 * 132.96254 * 179.81428 * 12 11 10 14 14 C 1.36951 * 110.11247 * 179.71494 * 13 12 11 15 15 C 1.34180 * 109.95220 * 359.97438 * 14 13 12 16 16 C 1.50694 * 126.59979 * 180.02562 * 15 14 13 17 17 O 1.42898 * 109.47472 * 105.00217 * 16 15 14 18 18 Si 1.86301 * 109.47203 * 344.99908 * 16 15 14 19 19 C 1.41016 * 120.08091 * 359.49768 * 12 11 10 20 20 C 1.39283 * 119.62448 * 0.23970 * 19 12 11 21 21 C 1.50698 * 121.03386 * 179.97438 * 20 19 12 22 22 C 1.53786 * 113.61558 * 192.35849 * 5 3 2 23 23 C 1.53787 * 87.07843 * 219.93556 * 22 5 3 24 24 O 1.42904 * 113.60802 * 270.79736 * 23 22 5 25 25 C 1.52995 * 113.61458 * 139.97904 * 23 22 5 26 26 F 1.39907 * 109.46819 * 59.99670 * 25 23 22 27 27 F 1.39902 * 109.47032 * 179.97438 * 25 23 22 28 28 F 1.39893 * 109.47370 * 299.99732 * 25 23 22 29 29 C 1.53778 * 113.69163 * 94.81767 * 5 3 2 30 30 H 1.08995 * 109.47110 * 300.00179 * 1 2 3 31 31 H 1.09001 * 109.46934 * 59.99908 * 1 2 3 32 32 H 1.08997 * 109.47019 * 179.97438 * 1 2 3 33 33 H 0.97002 * 119.99396 * 113.37819 * 6 5 3 34 34 H 1.07996 * 119.31354 * 359.97438 * 10 9 7 35 35 H 0.97004 * 124.94760 * 359.68889 * 13 12 11 36 36 H 1.07998 * 125.02740 * 180.02562 * 14 13 12 37 37 H 1.09000 * 109.46974 * 224.99918 * 16 15 14 38 38 H 0.96704 * 114.00148 * 300.00390 * 17 16 15 39 39 H 1.48501 * 110.00031 * 179.97438 * 18 16 15 40 40 H 1.48495 * 110.00317 * 301.31947 * 18 16 15 41 41 H 1.09003 * 109.47046 * 96.24430 * 21 20 19 42 42 H 1.08992 * 109.47099 * 216.24716 * 21 20 19 43 43 H 1.09006 * 109.46990 * 336.24814 * 21 20 19 44 44 H 1.08998 * 113.60885 * 334.48032 * 22 5 3 45 45 H 1.08991 * 113.61355 * 105.38545 * 22 5 3 46 46 H 0.96705 * 113.99355 * 180.02562 * 24 23 22 47 47 H 1.08994 * 113.61566 * 254.54093 * 29 5 3 48 48 H 1.08996 * 113.61707 * 25.44908 * 29 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1915 0.2200 0.8011 7 6 4.0276 0.2035 2.1387 8 8 3.2858 1.0068 2.6702 9 6 4.7491 -0.7903 2.9587 10 6 5.6905 -1.6449 2.3726 11 7 6.3463 -2.5316 3.0855 12 6 6.1447 -2.6702 4.3910 13 7 6.6855 -3.5029 5.3371 14 6 6.1368 -3.2407 6.5642 15 6 5.2390 -2.2488 6.4618 16 6 4.4164 -1.6625 7.5801 17 8 4.9444 -0.3845 7.9405 18 14 4.4762 -2.7978 9.0561 19 6 5.2122 -1.8456 5.0536 20 6 4.5019 -0.8903 4.3305 21 6 3.4974 0.0072 5.0063 22 6 4.1096 2.6816 0.3011 23 6 5.1721 2.4171 -0.7788 24 8 6.3583 1.7993 -0.2754 25 6 5.4638 3.6318 -1.6621 26 9 5.9291 4.6852 -0.8675 27 9 6.4378 3.2968 -2.6089 28 9 4.2917 4.0244 -2.3171 29 6 4.1766 1.4256 -1.4040 30 1 -0.3633 0.5138 0.8899 31 1 -0.3633 0.5139 -0.8900 32 1 -0.3633 -1.0276 -0.0005 33 1 4.7235 -0.4665 0.3691 34 1 5.8843 -1.5707 1.3127 35 1 7.3585 -4.1794 5.1625 36 1 6.3899 -3.7556 7.4792 37 1 3.3837 -1.5491 7.2505 38 1 5.8622 -0.4095 8.2442 39 1 3.6692 -2.2305 10.1661 40 1 3.9592 -4.1397 8.6860 41 1 3.9689 0.9582 5.2543 42 1 2.6571 0.1824 4.3348 43 1 3.1400 -0.4700 5.9189 44 1 3.4157 3.4819 0.0441 45 1 4.5228 2.7841 1.3044 46 1 7.0305 1.6308 -0.9499 47 1 4.6440 0.5144 -1.7770 48 1 3.5012 1.8827 -2.1271 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18364788_12890568.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:18:22 Heat of formation + Delta-G solvation = -228.129652 kcal Electronic energy + Delta-G solvation = -44712.030342 eV Core-core repulsion = 38514.469102 eV Total energy + Delta-G solvation = -6197.561240 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 430.128 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -51.29561 -48.82727 -48.77268 -42.94830 -42.60585 -40.90868 -40.20728 -38.69657 -37.70710 -37.69588 -36.65165 -35.09831 -34.44465 -31.92092 -31.18192 -29.65094 -28.93287 -28.51064 -27.57913 -26.49513 -25.68049 -24.73872 -23.97195 -22.63486 -22.17785 -20.88771 -20.64321 -20.24391 -19.62031 -19.55741 -19.29898 -19.10714 -18.65104 -18.09524 -17.71308 -17.49173 -17.39514 -17.21007 -16.70530 -16.60215 -16.35826 -15.96706 -15.88417 -15.63677 -15.57705 -15.51327 -15.28445 -15.20219 -15.08836 -14.96707 -14.92499 -14.81062 -14.66109 -14.46876 -14.21977 -14.11574 -14.03253 -13.79520 -13.74548 -13.62758 -13.59572 -13.30416 -13.21902 -13.07288 -12.73783 -12.37930 -12.28347 -12.01446 -11.93086 -11.86786 -11.55666 -11.26643 -11.15442 -10.59589 -10.43804 -10.18817 -9.63539 -9.09971 -4.98321 -0.37413 -0.06229 0.80574 1.24860 1.35557 1.44425 1.54837 1.65128 1.70018 1.76460 1.78743 2.06013 2.24343 2.45577 2.48887 2.66690 2.74074 2.93426 3.21970 3.30004 3.36356 3.48497 3.54636 3.62368 3.62832 3.73629 3.77274 4.08463 4.14778 4.17766 4.21772 4.22483 4.25503 4.30976 4.34717 4.36015 4.47730 4.56574 4.59804 4.60566 4.67025 4.78532 4.95911 5.07037 5.18182 5.20631 5.23192 5.37604 5.74377 6.24936 6.27915 6.32901 6.48250 6.84003 6.89070 7.00464 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.352 6.352 3 C 0.471 3.529 4 O -0.523 6.523 5 C 0.171 3.829 6 N -0.676 5.676 7 C 0.579 3.421 8 O -0.557 6.557 9 C -0.237 4.237 10 C 0.187 3.813 11 N -0.513 5.513 12 C 0.291 3.709 13 N -0.559 5.559 14 C 0.096 3.904 15 C -0.207 4.207 16 C -0.050 4.050 17 O -0.558 6.558 18 Si 0.804 3.196 19 C -0.168 4.168 20 C 0.062 3.938 21 C -0.111 4.111 22 C -0.112 4.112 23 C 0.084 3.916 24 O -0.504 6.504 25 C 0.437 3.563 26 F -0.185 7.185 27 F -0.174 7.174 28 F -0.177 7.177 29 C -0.128 4.128 30 H 0.051 0.949 31 H 0.070 0.930 32 H 0.130 0.870 33 H 0.426 0.574 34 H 0.198 0.802 35 H 0.440 0.560 36 H 0.231 0.769 37 H 0.094 0.906 38 H 0.394 0.606 39 H -0.307 1.307 40 H -0.279 1.279 41 H 0.073 0.927 42 H 0.078 0.922 43 H 0.069 0.931 44 H 0.121 0.879 45 H 0.094 0.906 46 H 0.410 0.590 47 H 0.155 0.845 48 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.444 -9.242 -0.440 11.275 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.268 6.268 3 C 0.312 3.688 4 O -0.410 6.410 5 C 0.081 3.919 6 N -0.332 5.332 7 C 0.369 3.631 8 O -0.436 6.436 9 C -0.244 4.244 10 C 0.018 3.982 11 N -0.226 5.226 12 C 0.057 3.943 13 N -0.166 5.166 14 C -0.030 4.030 15 C -0.214 4.214 16 C -0.159 4.159 17 O -0.366 6.366 18 Si 0.708 3.292 19 C -0.175 4.175 20 C 0.053 3.947 21 C -0.167 4.167 22 C -0.150 4.150 23 C 0.040 3.960 24 O -0.313 6.313 25 C 0.382 3.618 26 F -0.166 7.166 27 F -0.156 7.156 28 F -0.159 7.159 29 C -0.166 4.166 30 H 0.070 0.930 31 H 0.089 0.911 32 H 0.148 0.852 33 H 0.267 0.733 34 H 0.215 0.785 35 H 0.281 0.719 36 H 0.247 0.753 37 H 0.112 0.888 38 H 0.244 0.756 39 H -0.235 1.235 40 H -0.206 1.206 41 H 0.091 0.909 42 H 0.097 0.903 43 H 0.088 0.912 44 H 0.139 0.861 45 H 0.113 0.887 46 H 0.264 0.736 47 H 0.173 0.827 48 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 5.102 -9.329 0.510 10.645 hybrid contribution -0.637 0.958 -1.054 1.561 sum 4.465 -8.371 -0.545 9.503 Atomic orbital electron populations 1.23545 0.74913 1.05668 1.02424 1.86494 1.24741 1.32364 1.83157 1.23868 0.91799 0.81664 0.71432 1.90687 1.66964 1.37360 1.46008 1.20675 0.84362 0.90661 0.96173 1.45117 1.53355 1.29375 1.05308 1.18054 0.80133 0.83050 0.81885 1.90793 1.38878 1.41505 1.72412 1.20308 1.05996 1.03983 0.94128 1.22990 0.88167 0.86902 1.00152 1.66543 1.28155 1.23325 1.04553 1.18775 0.94011 0.92635 0.88841 1.41624 1.37329 1.32428 1.05211 1.22387 0.94335 0.97313 0.89014 1.20794 1.05308 1.02655 0.92653 1.24788 0.97172 0.92011 1.01939 1.86499 1.34131 1.28521 1.87431 0.94066 0.88340 0.73902 0.72891 1.19752 1.01714 1.00262 0.95809 1.20020 0.91765 0.91156 0.91718 1.20970 0.97623 0.97942 1.00128 1.23435 0.94971 0.96041 1.00546 1.23030 0.88764 0.89621 0.94617 1.86693 1.26140 1.79545 1.38954 1.21193 0.74509 0.86101 0.79975 1.93223 1.88902 1.60631 1.73851 1.93210 1.63634 1.92101 1.66612 1.93207 1.48281 1.92041 1.82325 1.24107 0.96969 1.02623 0.92858 0.93028 0.91101 0.85176 0.73269 0.78514 0.71888 0.75266 0.88822 0.75625 1.23523 1.20575 0.90885 0.90304 0.91191 0.86136 0.88731 0.73564 0.82711 0.85092 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 10.56 113.37 1.20 1.24 16 2 O -0.35 -1.77 10.43 -51.39 -0.54 -2.30 16 3 C 0.47 3.33 6.40 71.24 0.46 3.79 16 4 O -0.52 -6.89 15.65 21.98 0.34 -6.55 16 5 C 0.17 0.12 1.00 3.38 0.00 0.12 16 6 N -0.68 0.99 4.48 -426.92 -1.91 -0.92 16 7 C 0.58 3.40 7.20 86.74 0.62 4.02 16 8 O -0.56 -7.43 12.22 -3.95 -0.05 -7.48 16 9 C -0.24 -1.16 5.89 -19.99 -0.12 -1.27 16 10 C 0.19 0.06 10.66 85.20 0.91 0.97 16 11 N -0.51 -1.64 10.37 -191.75 -1.99 -3.63 16 12 C 0.29 0.87 8.42 134.02 1.13 2.00 16 13 N -0.56 2.63 6.04 -192.25 -1.16 1.47 16 14 C 0.10 -0.70 10.44 82.97 0.87 0.17 16 15 C -0.21 0.11 5.57 -18.64 -0.10 0.01 16 16 C -0.05 0.03 2.06 71.23 0.15 0.18 16 17 O -0.56 -0.42 12.88 -148.98 -1.92 -2.34 16 18 Si 0.80 -4.34 30.77 68.60 2.11 -2.23 16 19 C -0.17 -0.87 6.16 -20.19 -0.12 -1.00 16 20 C 0.06 0.48 5.98 -19.25 -0.12 0.37 16 21 C -0.11 -1.06 8.70 71.24 0.62 -0.44 16 22 C -0.11 -0.36 6.02 31.12 0.19 -0.17 16 23 C 0.08 -0.29 1.36 -10.27 -0.01 -0.30 16 24 O -0.50 3.29 12.92 -148.98 -1.92 1.37 16 25 C 0.44 -0.09 2.85 71.98 0.21 0.12 16 26 F -0.18 -0.85 17.18 44.97 0.77 -0.08 16 27 F -0.17 0.34 16.65 44.97 0.75 1.09 16 28 F -0.18 -0.35 15.75 44.97 0.71 0.36 16 29 C -0.13 0.89 6.63 31.12 0.21 1.10 16 30 H 0.05 0.23 8.13 -2.39 -0.02 0.21 16 31 H 0.07 0.03 8.13 -2.39 -0.02 0.01 16 32 H 0.13 -0.58 8.14 -2.39 -0.02 -0.60 16 33 H 0.43 -3.82 6.78 -92.71 -0.63 -4.44 16 34 H 0.20 -1.68 6.47 -2.91 -0.02 -1.70 16 35 H 0.44 -4.57 8.96 -92.71 -0.83 -5.40 16 36 H 0.23 -3.95 6.36 -2.91 -0.02 -3.97 16 37 H 0.09 0.28 6.05 -2.39 -0.01 0.26 16 38 H 0.39 -3.17 8.70 -74.05 -0.64 -3.82 16 39 H -0.31 -1.13 7.11 99.48 0.71 -0.42 16 40 H -0.28 0.37 7.11 99.48 0.71 1.07 16 41 H 0.07 0.85 8.14 -2.39 -0.02 0.83 16 42 H 0.08 0.99 5.93 -2.39 -0.01 0.98 16 43 H 0.07 0.57 5.06 -2.38 -0.01 0.56 16 44 H 0.12 0.65 7.09 -2.39 -0.02 0.63 16 45 H 0.09 0.68 7.45 -2.39 -0.02 0.66 16 46 H 0.41 -5.90 8.42 -74.05 -0.62 -6.52 16 47 H 0.15 -2.31 8.09 -2.39 -0.02 -2.32 16 48 H 0.13 -0.88 7.09 -2.39 -0.02 -0.90 16 Total: 0.00 -34.97 410.42 -0.27 -35.25 By element: Atomic # 1 Polarization: -23.35 SS G_CDS: -1.54 Total: -24.89 kcal Atomic # 6 Polarization: 4.82 SS G_CDS: 6.07 Total: 10.89 kcal Atomic # 7 Polarization: 1.98 SS G_CDS: -5.06 Total: -3.08 kcal Atomic # 8 Polarization: -13.22 SS G_CDS: -4.08 Total: -17.30 kcal Atomic # 9 Polarization: -0.86 SS G_CDS: 2.23 Total: 1.37 kcal Atomic # 14 Polarization: -4.34 SS G_CDS: 2.11 Total: -2.23 kcal Total: -34.97 -0.27 -35.25 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_12890568.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -192.883 kcal (2) G-P(sol) polarization free energy of solvation -34.975 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -227.858 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.272 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.247 kcal (6) G-S(sol) free energy of system = (1) + (5) -228.130 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds