Wall clock time and date at job start Tue Mar 9 2021 14:18:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34230 * 116.99957 * 2 1 4 4 O 1.20822 * 120.00008 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99906 * 180.02562 * 3 2 1 6 6 N 1.46496 * 112.84849 * 35.49624 * 5 3 2 7 7 C 1.34775 * 120.00375 * 66.99210 * 6 5 3 8 8 O 1.21588 * 119.99679 * 354.93092 * 7 6 5 9 9 C 1.47566 * 120.00094 * 174.92768 * 7 6 5 10 10 C 1.40212 * 120.12132 * 179.97438 * 9 7 6 11 11 O 1.35653 * 120.00028 * 0.02660 * 10 9 7 12 12 C 1.38813 * 119.99610 * 179.97438 * 10 9 7 13 13 C 1.37770 * 120.24324 * 0.02562 * 12 10 9 14 14 C 1.39842 * 120.24755 * 359.97438 * 13 12 10 15 15 C 1.47817 * 119.99886 * 180.02562 * 14 13 12 16 16 C 1.35935 * 125.93311 * 359.97438 * 15 14 13 17 17 C 1.40969 * 106.74083 * 179.76746 * 16 15 14 18 18 C 1.34710 * 107.03203 * 0.34683 * 17 16 15 19 19 C 1.50695 * 125.66646 * 179.90882 * 18 17 16 20 20 O 1.42894 * 109.47282 * 299.71965 * 19 18 17 21 21 Si 1.86303 * 109.47101 * 179.71778 * 19 18 17 22 22 O 1.34346 * 108.66694 * 359.65118 * 18 17 16 23 23 C 1.39175 * 119.99949 * 0.27318 * 14 13 12 24 24 C 1.53788 * 113.68990 * 264.22567 * 5 3 2 25 25 C 1.53782 * 87.07794 * 220.01049 * 24 5 3 26 26 O 1.42906 * 113.68703 * 270.86858 * 25 24 5 27 27 C 1.52995 * 113.61103 * 139.98705 * 25 24 5 28 28 F 1.39901 * 109.47479 * 322.49541 * 27 25 24 29 29 F 1.39898 * 109.47568 * 82.50059 * 27 25 24 30 30 F 1.39911 * 109.46948 * 202.49846 * 27 25 24 31 31 C 1.53777 * 87.08601 * 25.43272 * 25 24 5 32 32 H 1.09004 * 109.47052 * 300.00078 * 1 2 3 33 33 H 1.09004 * 109.47095 * 59.99563 * 1 2 3 34 34 H 1.09000 * 109.46955 * 179.97438 * 1 2 3 35 35 H 0.97005 * 119.99707 * 246.98606 * 6 5 3 36 36 H 0.96706 * 113.99514 * 269.97183 * 11 10 9 37 37 H 1.08003 * 119.87794 * 180.02562 * 12 10 9 38 38 H 1.08003 * 119.87252 * 179.97438 * 13 12 10 39 39 H 1.07994 * 126.62468 * 359.94170 * 16 15 14 40 40 H 1.07997 * 126.48643 * 180.23144 * 17 16 15 41 41 H 1.08997 * 109.47063 * 59.72505 * 19 18 17 42 42 H 0.96700 * 113.99936 * 300.00068 * 20 19 18 43 43 H 1.48501 * 109.99746 * 58.68594 * 21 19 18 44 44 H 1.48502 * 109.99906 * 180.02562 * 21 19 18 45 45 H 1.07998 * 120.12187 * 179.73083 * 23 14 13 46 46 H 1.09001 * 113.61495 * 334.55616 * 24 5 3 47 47 H 1.08999 * 113.60782 * 105.45696 * 24 5 3 48 48 H 0.96695 * 114.00542 * 277.53777 * 26 25 24 49 49 H 1.08993 * 113.61483 * 220.02134 * 31 25 24 50 50 H 1.08998 * 113.68716 * 89.12496 * 31 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1916 0.2072 -0.7849 7 6 4.0339 0.1731 -2.1230 8 8 3.2987 0.9729 -2.6690 9 6 4.7536 -0.8348 -2.9253 10 6 4.5911 -0.8729 -4.3175 11 8 3.7714 0.0182 -4.9292 12 6 5.2697 -1.8218 -5.0697 13 6 6.1038 -2.7288 -4.4536 14 6 6.2735 -2.7000 -3.0658 15 6 7.1702 -3.6754 -2.4104 16 6 7.8851 -4.6476 -3.0363 17 6 8.5997 -5.3350 -2.0342 18 6 8.2828 -4.7593 -0.8583 19 6 8.8119 -5.1697 0.4917 20 8 8.4472 -6.5262 0.7541 21 14 8.0854 -4.0661 1.8052 22 8 7.4210 -3.7549 -1.0896 23 6 5.5940 -1.7563 -2.3011 24 6 4.1765 1.4484 1.4003 25 6 5.1720 2.4296 0.7591 26 8 6.3583 1.8037 0.2661 27 6 5.4637 3.6584 1.6227 28 9 4.2915 4.0616 2.2712 29 9 6.4372 3.3387 2.5752 30 9 5.9291 4.6988 0.8113 31 6 4.1096 2.6765 -0.3249 32 1 -0.3633 0.5139 0.8900 33 1 -0.3633 0.5139 -0.8900 34 1 -0.3633 -1.0277 -0.0005 35 1 4.7192 -0.4753 -0.3412 36 1 2.8560 -0.2823 -5.0125 37 1 5.1434 -1.8491 -6.1420 38 1 6.6286 -3.4648 -5.0446 39 1 7.9042 -4.8518 -4.0966 40 1 9.2723 -6.1670 -2.1812 41 1 9.8980 -5.0773 0.4997 42 1 7.4929 -6.6823 0.7621 43 1 6.6034 -4.1587 1.7836 44 1 8.5999 -4.4602 3.1413 45 1 5.7202 -1.7351 -1.2287 46 1 3.5009 1.9171 2.1159 47 1 4.6438 0.5432 1.7881 48 1 7.0303 1.6458 0.9432 49 1 4.5230 2.7628 -1.3297 50 1 3.4152 3.4809 -0.0823 There are 83 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 83 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18364788_13259648.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:18:40 Heat of formation + Delta-G solvation = -294.179844 kcal Electronic energy + Delta-G solvation = -48798.781343 eV Core-core repulsion = 42119.154868 eV Total energy + Delta-G solvation = -6679.626475 eV No. of doubly occupied orbitals = 83 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 458.120 amu Computer time = 1.70 seconds Orbital eigenvalues (eV) -51.28588 -48.81647 -48.76230 -43.64902 -42.77256 -41.33084 -40.57011 -39.35352 -38.18091 -37.81984 -37.71549 -36.54979 -34.60359 -34.06557 -32.72108 -32.27119 -30.04833 -29.68236 -28.55143 -27.59476 -26.36169 -25.91741 -25.13439 -23.58658 -23.04822 -22.53613 -22.01753 -21.23036 -20.82186 -20.25058 -19.82018 -19.55362 -19.46749 -19.15177 -18.88627 -18.39279 -18.09429 -17.65013 -17.50610 -17.43712 -17.26867 -16.74678 -16.55248 -16.38705 -16.27729 -15.85792 -15.76999 -15.72155 -15.60854 -15.49641 -15.19227 -15.15226 -14.96454 -14.92442 -14.85470 -14.62567 -14.49853 -14.42643 -14.29852 -14.12795 -13.91245 -13.75515 -13.72088 -13.62185 -13.50824 -13.22013 -13.18798 -13.09629 -12.84279 -12.74131 -12.37614 -12.08132 -11.93968 -11.90499 -11.86615 -11.55707 -11.02630 -11.00099 -10.77323 -10.52715 -10.38586 -10.19357 -8.86550 -4.90758 -0.54360 -0.18678 0.78789 0.80746 1.21143 1.24666 1.48182 1.52598 1.60018 1.68029 1.75854 1.86850 1.98381 2.24190 2.44781 2.49329 2.63544 2.67311 2.91517 3.12286 3.20323 3.25474 3.31614 3.36680 3.44385 3.64254 3.70862 3.93579 4.05475 4.06255 4.08687 4.17915 4.21359 4.21910 4.23561 4.31753 4.38842 4.45811 4.48925 4.55534 4.60497 4.66915 4.70802 4.83880 4.92001 5.04976 5.06080 5.15987 5.16961 5.23692 5.47793 5.53004 6.02172 6.24649 6.34806 6.39506 6.46813 6.71896 6.98261 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.353 6.353 3 C 0.471 3.529 4 O -0.522 6.522 5 C 0.169 3.831 6 N -0.679 5.679 7 C 0.567 3.433 8 O -0.548 6.548 9 C -0.175 4.175 10 C 0.165 3.835 11 O -0.495 6.495 12 C -0.148 4.148 13 C -0.044 4.044 14 C -0.040 4.040 15 C 0.027 3.973 16 C -0.192 4.192 17 C -0.184 4.184 18 C -0.051 4.051 19 C -0.043 4.043 20 O -0.537 6.537 21 Si 0.778 3.222 22 O -0.168 6.168 23 C -0.044 4.044 24 C -0.130 4.130 25 C 0.084 3.916 26 O -0.504 6.504 27 C 0.438 3.562 28 F -0.177 7.177 29 F -0.173 7.173 30 F -0.184 7.184 31 C -0.111 4.111 32 H 0.069 0.931 33 H 0.053 0.947 34 H 0.131 0.869 35 H 0.424 0.576 36 H 0.409 0.591 37 H 0.162 0.838 38 H 0.164 0.836 39 H 0.172 0.828 40 H 0.158 0.842 41 H 0.149 0.851 42 H 0.390 0.610 43 H -0.281 1.281 44 H -0.289 1.289 45 H 0.155 0.845 46 H 0.132 0.868 47 H 0.153 0.847 48 H 0.411 0.589 49 H 0.092 0.908 50 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.846 -7.048 1.563 7.760 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.268 6.268 3 C 0.313 3.687 4 O -0.409 6.409 5 C 0.079 3.921 6 N -0.335 5.335 7 C 0.356 3.644 8 O -0.426 6.426 9 C -0.178 4.178 10 C 0.118 3.882 11 O -0.309 6.309 12 C -0.166 4.166 13 C -0.062 4.062 14 C -0.040 4.040 15 C -0.023 4.023 16 C -0.210 4.210 17 C -0.204 4.204 18 C -0.101 4.101 19 C -0.152 4.152 20 O -0.345 6.345 21 Si 0.680 3.320 22 O -0.066 6.066 23 C -0.062 4.062 24 C -0.167 4.167 25 C 0.040 3.960 26 O -0.313 6.313 27 C 0.383 3.617 28 F -0.159 7.159 29 F -0.154 7.154 30 F -0.166 7.166 31 C -0.149 4.149 32 H 0.088 0.912 33 H 0.072 0.928 34 H 0.149 0.851 35 H 0.265 0.735 36 H 0.270 0.730 37 H 0.179 0.821 38 H 0.181 0.819 39 H 0.189 0.811 40 H 0.176 0.824 41 H 0.166 0.834 42 H 0.240 0.760 43 H -0.207 1.207 44 H -0.216 1.216 45 H 0.172 0.828 46 H 0.150 0.850 47 H 0.171 0.829 48 H 0.265 0.735 49 H 0.111 0.889 50 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 2.315 -5.641 1.585 6.300 hybrid contribution -0.812 -1.090 0.243 1.381 sum 1.503 -6.731 1.828 7.135 Atomic orbital electron populations 1.23561 0.74800 1.05719 1.02488 1.86494 1.24836 1.32310 1.83168 1.23834 0.91715 0.81702 0.71462 1.90690 1.66913 1.37344 1.45983 1.20696 0.84491 0.90466 0.96421 1.45197 1.53610 1.28898 1.05787 1.18290 0.80610 0.83632 0.81892 1.90857 1.38419 1.41504 1.71775 1.20066 1.04232 0.99859 0.93682 1.18887 0.92554 0.88013 0.88731 1.84721 1.24463 1.42647 1.79031 1.21546 0.98770 0.94270 1.02048 1.21419 0.95009 0.97446 0.92289 1.17665 0.97916 0.95324 0.93128 1.20371 1.01689 0.99554 0.80688 1.22137 0.99907 0.97116 1.01887 1.21770 1.03894 1.03222 0.91472 1.23023 0.96468 0.91841 0.98777 1.24594 1.05877 0.89149 0.95569 1.86644 1.30294 1.25103 1.92507 0.93671 0.77801 0.86420 0.74058 1.83894 1.51573 1.45600 1.25491 1.21424 0.92478 0.91404 1.00909 1.24123 0.97081 1.02604 0.92935 1.23016 0.88780 0.89386 0.94829 1.86694 1.26134 1.79158 1.39359 1.21163 0.74532 0.86324 0.79688 1.93209 1.48305 1.91783 1.82576 1.93210 1.63611 1.92476 1.66136 1.93226 1.88894 1.61541 1.72913 1.23418 0.95031 0.96055 1.00434 0.91237 0.92811 0.85089 0.73509 0.73034 0.82076 0.81856 0.81082 0.82402 0.83358 0.76015 1.20683 1.21569 0.82756 0.85005 0.82873 0.73467 0.88901 0.86100 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 113.37 1.20 1.20 16 2 O -0.35 -1.43 10.41 -51.41 -0.54 -1.96 16 3 C 0.47 3.05 6.42 71.24 0.46 3.51 16 4 O -0.52 -6.52 15.66 21.97 0.34 -6.18 16 5 C 0.17 0.10 1.00 3.39 0.00 0.10 16 6 N -0.68 1.05 4.47 -427.01 -1.91 -0.86 16 7 C 0.57 2.67 7.24 86.70 0.63 3.30 16 8 O -0.55 -6.88 13.86 17.00 0.24 -6.64 16 9 C -0.17 -0.24 5.88 -20.04 -0.12 -0.36 16 10 C 0.16 0.30 6.72 22.89 0.15 0.46 16 11 O -0.50 -2.28 11.55 -68.69 -0.79 -3.08 16 12 C -0.15 0.47 9.96 22.30 0.22 0.70 16 13 C -0.04 0.22 9.54 22.55 0.22 0.44 16 14 C -0.04 0.12 5.87 -20.13 -0.12 0.00 16 15 C 0.03 -0.06 7.03 24.27 0.17 0.12 16 16 C -0.19 0.56 10.26 22.40 0.23 0.79 16 17 C -0.18 0.33 10.77 22.13 0.24 0.57 16 18 C -0.05 0.13 6.22 24.87 0.15 0.28 16 19 C -0.04 0.20 2.98 71.23 0.21 0.42 16 20 O -0.54 0.97 12.87 -148.98 -1.92 -0.95 16 21 Si 0.78 -4.71 32.10 68.60 2.20 -2.51 16 22 O -0.17 0.37 8.78 -6.63 -0.06 0.31 16 23 C -0.04 0.13 9.20 22.79 0.21 0.34 16 24 C -0.13 0.90 6.64 31.12 0.21 1.11 16 25 C 0.08 -0.30 1.36 -10.27 -0.01 -0.31 16 26 O -0.50 3.37 12.92 -148.98 -1.92 1.44 16 27 C 0.44 -0.24 2.85 71.98 0.21 -0.04 16 28 F -0.18 -0.29 15.76 44.97 0.71 0.42 16 29 F -0.17 0.44 16.65 44.97 0.75 1.19 16 30 F -0.18 -0.79 17.18 44.97 0.77 -0.02 16 31 C -0.11 -0.35 6.02 31.12 0.19 -0.16 16 32 H 0.07 -0.03 8.13 -2.39 -0.02 -0.05 16 33 H 0.05 0.15 8.13 -2.39 -0.02 0.13 16 34 H 0.13 -0.77 8.14 -2.39 -0.02 -0.79 16 35 H 0.42 -3.46 6.71 -92.70 -0.62 -4.08 16 36 H 0.41 -0.88 9.06 -74.05 -0.67 -1.55 16 37 H 0.16 -1.10 8.06 -2.91 -0.02 -1.13 16 38 H 0.16 -1.68 6.96 -2.91 -0.02 -1.70 16 39 H 0.17 -1.27 7.24 -2.91 -0.02 -1.30 16 40 H 0.16 -0.51 8.06 -2.91 -0.02 -0.54 16 41 H 0.15 -1.10 7.96 -2.39 -0.02 -1.12 16 42 H 0.39 -2.77 8.70 -74.06 -0.64 -3.42 16 43 H -0.28 0.47 7.11 99.48 0.71 1.18 16 44 H -0.29 -0.16 7.11 99.48 0.71 0.54 16 45 H 0.15 -1.22 6.25 -2.91 -0.02 -1.23 16 46 H 0.13 -0.91 7.09 -2.39 -0.02 -0.93 16 47 H 0.15 -2.25 8.09 -2.39 -0.02 -2.27 16 48 H 0.41 -6.14 8.42 -74.06 -0.62 -6.76 16 49 H 0.09 0.70 7.41 -2.39 -0.02 0.68 16 50 H 0.12 0.64 7.09 -2.39 -0.02 0.62 16 Total: 0.00 -31.01 444.46 0.91 -30.10 By element: Atomic # 1 Polarization: -22.31 SS G_CDS: -1.40 Total: -23.71 kcal Atomic # 6 Polarization: 8.00 SS G_CDS: 4.44 Total: 12.44 kcal Atomic # 7 Polarization: 1.05 SS G_CDS: -1.91 Total: -0.86 kcal Atomic # 8 Polarization: -12.41 SS G_CDS: -4.65 Total: -17.06 kcal Atomic # 9 Polarization: -0.64 SS G_CDS: 2.23 Total: 1.59 kcal Atomic # 14 Polarization: -4.71 SS G_CDS: 2.20 Total: -2.51 kcal Total: -31.01 0.91 -30.10 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_13259648.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -264.084 kcal (2) G-P(sol) polarization free energy of solvation -31.007 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -295.091 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.911 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.096 kcal (6) G-S(sol) free energy of system = (1) + (5) -294.180 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.70 seconds