Wall clock time and date at job start Tue Mar 9 2021 14:18:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34233 * 116.99988 * 2 1 4 4 O 1.20825 * 120.00007 * 0.02562 * 3 2 1 5 5 C 1.50701 * 120.00111 * 179.97438 * 3 2 1 6 6 N 1.46508 * 112.84919 * 324.47264 * 5 3 2 7 7 C 1.34775 * 119.99912 * 294.09312 * 6 5 3 8 8 O 1.21626 * 119.99835 * 354.99413 * 7 6 5 9 9 C 1.47258 * 119.99748 * 175.00328 * 7 6 5 10 10 C 1.36770 * 126.94485 * 359.96716 * 9 7 6 11 11 N 1.34659 * 108.39555 * 180.26833 * 10 9 7 12 12 C 1.46497 * 124.84673 * 179.73210 * 11 10 9 13 13 C 1.36446 * 110.30049 * 359.56101 * 11 10 9 14 14 C 1.50699 * 125.57311 * 180.18232 * 13 11 10 15 15 O 1.42895 * 109.47202 * 330.32780 * 14 13 11 16 16 Si 1.86297 * 109.47057 * 210.32548 * 14 13 11 17 17 C 1.34490 * 108.85228 * 0.44403 * 13 11 10 18 18 C 1.53778 * 113.61670 * 193.27330 * 5 3 2 19 19 C 1.53778 * 87.08226 * 219.93618 * 18 5 3 20 20 O 1.42905 * 113.61544 * 270.88450 * 19 18 5 21 21 C 1.52996 * 113.61492 * 140.06327 * 19 18 5 22 22 F 1.39906 * 109.47107 * 60.00279 * 21 19 18 23 23 F 1.39901 * 109.47511 * 180.02562 * 21 19 18 24 24 F 1.39896 * 109.47344 * 300.00189 * 21 19 18 25 25 C 1.53779 * 113.68933 * 95.73591 * 5 3 2 26 26 H 1.09000 * 109.47520 * 179.97438 * 1 2 3 27 27 H 1.08997 * 109.47325 * 300.00168 * 1 2 3 28 28 H 1.09006 * 109.47199 * 60.00148 * 1 2 3 29 29 H 0.96997 * 119.99817 * 114.09125 * 6 5 3 30 30 H 1.07994 * 125.79945 * 0.02562 * 10 9 7 31 31 H 1.09001 * 109.47146 * 90.02986 * 12 11 10 32 32 H 1.09000 * 109.47405 * 210.02056 * 12 11 10 33 33 H 1.08998 * 109.47503 * 330.02492 * 12 11 10 34 34 H 1.09004 * 109.46773 * 90.32888 * 14 13 11 35 35 H 0.96700 * 113.99903 * 300.00095 * 15 14 13 36 36 H 1.48508 * 110.00260 * 58.68381 * 16 14 13 37 37 H 1.48499 * 109.99971 * 179.97438 * 16 14 13 38 38 H 1.08002 * 126.83014 * 179.71922 * 17 13 11 39 39 H 1.08993 * 113.61326 * 334.48873 * 18 5 3 40 40 H 1.08997 * 113.61103 * 105.30435 * 18 5 3 41 41 H 0.96702 * 113.99809 * 179.97438 * 20 19 18 42 42 H 1.09000 * 113.61743 * 254.54470 * 25 5 3 43 43 H 1.09004 * 113.61449 * 25.44567 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2749 0.0006 6 7 4.1916 0.2076 0.7856 7 6 4.0158 0.1618 2.1210 8 8 3.4150 1.0556 2.6863 9 6 4.5514 -0.9702 2.8958 10 6 5.2439 -2.0447 2.4095 11 7 5.5488 -2.8556 3.4404 12 6 6.2846 -4.1171 3.3239 13 6 5.0780 -2.3326 4.6094 14 6 5.2312 -2.9556 5.9730 15 8 5.2866 -4.3776 5.8437 16 14 3.7766 -2.4851 7.0376 17 6 4.4497 -1.1733 4.3449 18 6 4.1096 2.6767 0.3240 19 6 5.1720 2.4292 -0.7598 20 8 6.3575 1.8018 -0.2667 21 6 5.4651 3.6581 -1.6228 22 9 5.9315 4.6976 -0.8108 23 9 6.4381 3.3376 -2.5756 24 9 4.2935 4.0627 -2.2714 25 6 4.1765 1.4475 -1.4004 26 1 -0.3634 -1.0276 -0.0005 27 1 -0.3634 0.5138 0.8899 28 1 -0.3634 0.5138 -0.8900 29 1 4.7321 -0.4661 0.3442 30 1 5.4991 -2.2158 1.3742 31 1 7.3524 -3.9260 3.4301 32 1 5.9584 -4.8016 4.1070 33 1 6.0903 -4.5622 2.3481 34 1 6.1508 -2.5966 6.4352 35 1 4.4993 -4.7667 5.4390 36 1 2.5138 -2.9409 6.4027 37 1 3.9154 -3.0937 8.3850 38 1 3.9663 -0.5216 5.0577 39 1 3.4157 3.4810 0.0797 40 1 4.5216 2.7640 1.3293 41 1 7.0294 1.6431 -0.9439 42 1 4.6438 0.5422 -1.7877 43 1 3.5009 1.9158 -2.1162 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18364788_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:18:52 Heat of formation + Delta-G solvation = -245.185540 kcal Electronic energy + Delta-G solvation = -37122.076421 eV Core-core repulsion = 31529.417533 eV Total energy + Delta-G solvation = -5592.658887 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.117 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -51.25307 -48.80449 -48.68990 -42.71753 -42.32857 -40.57244 -39.50182 -38.03769 -37.50230 -36.53142 -34.31276 -33.74673 -31.48729 -29.69139 -28.53625 -27.68771 -27.56240 -26.41509 -25.48350 -23.90068 -22.46718 -21.25110 -21.00860 -20.48340 -20.17401 -19.56241 -19.47620 -19.19292 -18.70236 -17.94447 -17.58362 -17.39695 -17.15046 -16.91872 -16.83177 -16.39428 -15.96077 -15.76920 -15.58503 -15.54245 -15.42585 -15.27955 -15.15110 -14.99406 -14.89666 -14.85662 -14.77419 -14.54248 -14.36438 -14.13617 -14.02469 -13.80831 -13.55632 -13.45929 -13.36650 -13.20013 -13.08090 -12.75297 -12.35513 -12.26355 -11.95302 -11.78326 -11.74585 -11.55976 -10.98628 -10.87001 -10.25192 -9.60913 -9.25438 -4.94812 0.69415 0.98995 1.01999 1.29650 1.41003 1.62627 1.70143 1.74469 1.87970 2.04253 2.19526 2.36637 2.47128 2.61692 2.67824 2.99964 3.00834 3.24888 3.35447 3.48379 3.67044 3.73039 3.77036 3.99130 4.11436 4.13522 4.17636 4.18775 4.21840 4.28996 4.36454 4.41750 4.48411 4.54662 4.62609 4.75196 4.86581 4.95494 5.22269 5.35616 5.62840 5.91169 5.95362 6.09689 6.14386 6.45615 6.69167 7.31332 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.349 6.349 3 C 0.473 3.527 4 O -0.488 6.488 5 C 0.176 3.824 6 N -0.697 5.697 7 C 0.600 3.400 8 O -0.531 6.531 9 C -0.224 4.224 10 C 0.055 3.945 11 N -0.425 5.425 12 C 0.050 3.950 13 C -0.022 4.022 14 C -0.048 4.048 15 O -0.532 6.532 16 Si 0.711 3.289 17 C -0.128 4.128 18 C -0.101 4.101 19 C 0.067 3.933 20 O -0.500 6.500 21 C 0.438 3.562 22 F -0.169 7.169 23 F -0.180 7.180 24 F -0.171 7.171 25 C -0.144 4.144 26 H 0.103 0.897 27 H 0.066 0.934 28 H 0.065 0.935 29 H 0.407 0.593 30 H 0.171 0.829 31 H 0.075 0.925 32 H 0.111 0.889 33 H 0.082 0.918 34 H 0.123 0.877 35 H 0.377 0.623 36 H -0.256 1.256 37 H -0.253 1.253 38 H 0.158 0.842 39 H 0.131 0.869 40 H 0.118 0.882 41 H 0.391 0.609 42 H 0.112 0.888 43 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.518 -6.355 -2.624 7.322 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.265 6.265 3 C 0.313 3.687 4 O -0.373 6.373 5 C 0.086 3.914 6 N -0.352 5.352 7 C 0.390 3.610 8 O -0.407 6.407 9 C -0.235 4.235 10 C -0.081 4.081 11 N -0.099 5.099 12 C -0.091 4.091 13 C -0.130 4.130 14 C -0.158 4.158 15 O -0.339 6.339 16 Si 0.609 3.391 17 C -0.152 4.152 18 C -0.139 4.139 19 C 0.023 3.977 20 O -0.307 6.307 21 C 0.383 3.617 22 F -0.151 7.151 23 F -0.162 7.162 24 F -0.152 7.152 25 C -0.182 4.182 26 H 0.121 0.879 27 H 0.085 0.915 28 H 0.084 0.916 29 H 0.244 0.756 30 H 0.188 0.812 31 H 0.094 0.906 32 H 0.129 0.871 33 H 0.100 0.900 34 H 0.141 0.859 35 H 0.226 0.774 36 H -0.180 1.180 37 H -0.178 1.178 38 H 0.175 0.825 39 H 0.149 0.851 40 H 0.136 0.864 41 H 0.241 0.759 42 H 0.131 0.869 43 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 1.592 -5.907 -0.915 6.186 hybrid contribution 0.534 -1.113 -1.832 2.209 sum 2.126 -7.020 -2.746 7.832 Atomic orbital electron populations 1.23349 0.75767 1.04006 1.02875 1.86502 1.23774 1.32738 1.83515 1.23378 0.90821 0.81957 0.72543 1.90708 1.66012 1.36340 1.44286 1.20574 0.85629 0.91036 0.94170 1.45253 1.53701 1.29350 1.06909 1.17390 0.78254 0.84896 0.80438 1.90825 1.41765 1.38302 1.69804 1.20098 1.11401 0.97684 0.94286 1.21925 1.01208 0.91634 0.93347 1.43485 1.42152 1.18449 1.05848 1.22554 0.97267 0.84167 1.05108 1.20743 1.06024 0.97916 0.88365 1.24776 1.13365 0.81982 0.95660 1.86556 1.44339 1.19070 1.83931 0.94186 0.74918 0.91886 0.78064 1.21614 1.03167 0.96548 0.93826 1.23480 0.93808 0.95741 1.00826 1.23323 0.88472 0.89549 0.96371 1.86723 1.26140 1.79585 1.38206 1.20987 0.74686 0.86396 0.79588 1.93253 1.88686 1.60732 1.72392 1.93197 1.64001 1.92596 1.66397 1.93219 1.47942 1.91618 1.82434 1.24037 0.97936 1.01323 0.94922 0.87867 0.91545 0.91637 0.75622 0.81225 0.90610 0.87140 0.89974 0.85944 0.77409 1.18048 1.17768 0.82451 0.85090 0.86397 0.75859 0.86925 0.85509 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.01 10.56 101.05 1.07 1.08 16 2 O -0.35 -0.78 10.41 -39.27 -0.41 -1.19 16 3 C 0.47 1.48 6.59 36.01 0.24 1.72 16 4 O -0.49 -2.76 15.66 -18.75 -0.29 -3.06 16 5 C 0.18 0.08 1.00 -132.16 -0.13 -0.05 16 6 N -0.70 0.31 4.52 -49.03 -0.22 0.09 16 7 C 0.60 1.63 7.36 -12.60 -0.09 1.54 16 8 O -0.53 -3.45 15.51 5.25 0.08 -3.37 16 9 C -0.22 -0.30 6.29 -103.35 -0.65 -0.95 16 10 C 0.06 -0.08 10.83 -16.84 -0.18 -0.26 16 11 N -0.42 0.53 3.09 -119.90 -0.37 0.16 16 12 C 0.05 -0.18 10.70 59.85 0.64 0.46 16 13 C -0.02 0.00 6.14 -81.86 -0.50 -0.50 16 14 C -0.05 0.07 2.98 36.01 0.11 0.17 16 15 O -0.53 0.70 9.96 -35.23 -0.35 0.35 16 16 Si 0.71 -0.89 31.12 -169.99 -5.29 -6.18 16 17 C -0.13 -0.16 9.49 -37.50 -0.36 -0.51 16 18 C -0.10 -0.13 5.98 -25.92 -0.15 -0.28 16 19 C 0.07 -0.08 1.36 -89.81 -0.12 -0.21 16 20 O -0.50 1.16 12.91 -35.23 -0.45 0.71 16 21 C 0.44 0.03 2.85 37.16 0.11 0.14 16 22 F -0.17 -0.34 17.18 2.25 0.04 -0.31 16 23 F -0.18 0.07 16.65 2.25 0.04 0.11 16 24 F -0.17 -0.16 15.76 2.25 0.04 -0.12 16 25 C -0.14 0.38 6.63 -25.92 -0.17 0.21 16 26 H 0.10 -0.23 8.14 -51.93 -0.42 -0.66 16 27 H 0.07 0.08 8.13 -51.93 -0.42 -0.35 16 28 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 29 H 0.41 -1.47 7.62 -40.82 -0.31 -1.78 16 30 H 0.17 -0.84 7.46 -52.49 -0.39 -1.24 16 31 H 0.08 -0.27 8.14 -51.93 -0.42 -0.70 16 32 H 0.11 -0.40 4.92 -51.93 -0.26 -0.65 16 33 H 0.08 -0.44 8.13 -51.93 -0.42 -0.86 16 34 H 0.12 -0.24 7.96 -51.93 -0.41 -0.65 16 35 H 0.38 -1.42 8.35 45.56 0.38 -1.03 16 36 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 37 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 38 H 0.16 0.06 6.89 -52.49 -0.36 -0.30 16 39 H 0.13 0.23 7.09 -51.93 -0.37 -0.14 16 40 H 0.12 0.35 7.19 -51.93 -0.37 -0.02 16 41 H 0.39 -2.30 8.42 45.56 0.38 -1.91 16 42 H 0.11 -0.62 8.09 -51.93 -0.42 -1.04 16 43 H 0.13 -0.34 7.10 -51.93 -0.37 -0.71 16 LS Contribution 377.53 15.07 5.69 5.69 Total: 0.00 -11.46 377.53 -5.52 -16.99 By element: Atomic # 1 Polarization: -8.61 SS G_CDS: -3.81 Total: -12.42 kcal Atomic # 6 Polarization: 2.77 SS G_CDS: -0.21 Total: 2.56 kcal Atomic # 7 Polarization: 0.83 SS G_CDS: -0.59 Total: 0.24 kcal Atomic # 8 Polarization: -5.13 SS G_CDS: -1.43 Total: -6.56 kcal Atomic # 9 Polarization: -0.43 SS G_CDS: 0.11 Total: -0.32 kcal Atomic # 14 Polarization: -0.89 SS G_CDS: -5.29 Total: -6.18 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -11.46 -5.52 -16.99 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -228.199 kcal (2) G-P(sol) polarization free energy of solvation -11.464 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -239.663 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.523 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.987 kcal (6) G-S(sol) free energy of system = (1) + (5) -245.186 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds