Wall clock time and date at job start Tue Mar 9 2021 14:18:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34233 * 116.99988 * 2 1 4 4 O 1.20825 * 120.00007 * 0.02562 * 3 2 1 5 5 C 1.50701 * 120.00111 * 179.97438 * 3 2 1 6 6 N 1.46508 * 112.84919 * 324.47264 * 5 3 2 7 7 C 1.34775 * 119.99912 * 294.09312 * 6 5 3 8 8 O 1.21626 * 119.99835 * 354.99413 * 7 6 5 9 9 C 1.47258 * 119.99748 * 175.00328 * 7 6 5 10 10 C 1.36770 * 126.94485 * 359.96716 * 9 7 6 11 11 N 1.34659 * 108.39555 * 180.26833 * 10 9 7 12 12 C 1.46497 * 124.84673 * 179.73210 * 11 10 9 13 13 C 1.36446 * 110.30049 * 359.56101 * 11 10 9 14 14 C 1.50699 * 125.57311 * 180.18232 * 13 11 10 15 15 O 1.42895 * 109.47202 * 330.32780 * 14 13 11 16 16 Si 1.86297 * 109.47057 * 210.32548 * 14 13 11 17 17 C 1.34490 * 108.85228 * 0.44403 * 13 11 10 18 18 C 1.53778 * 113.61670 * 193.27330 * 5 3 2 19 19 C 1.53778 * 87.08226 * 219.93618 * 18 5 3 20 20 O 1.42905 * 113.61544 * 270.88450 * 19 18 5 21 21 C 1.52996 * 113.61492 * 140.06327 * 19 18 5 22 22 F 1.39906 * 109.47107 * 60.00279 * 21 19 18 23 23 F 1.39901 * 109.47511 * 180.02562 * 21 19 18 24 24 F 1.39896 * 109.47344 * 300.00189 * 21 19 18 25 25 C 1.53779 * 113.68933 * 95.73591 * 5 3 2 26 26 H 1.09000 * 109.47520 * 179.97438 * 1 2 3 27 27 H 1.08997 * 109.47325 * 300.00168 * 1 2 3 28 28 H 1.09006 * 109.47199 * 60.00148 * 1 2 3 29 29 H 0.96997 * 119.99817 * 114.09125 * 6 5 3 30 30 H 1.07994 * 125.79945 * 0.02562 * 10 9 7 31 31 H 1.09001 * 109.47146 * 90.02986 * 12 11 10 32 32 H 1.09000 * 109.47405 * 210.02056 * 12 11 10 33 33 H 1.08998 * 109.47503 * 330.02492 * 12 11 10 34 34 H 1.09004 * 109.46773 * 90.32888 * 14 13 11 35 35 H 0.96700 * 113.99903 * 300.00095 * 15 14 13 36 36 H 1.48508 * 110.00260 * 58.68381 * 16 14 13 37 37 H 1.48499 * 109.99971 * 179.97438 * 16 14 13 38 38 H 1.08002 * 126.83014 * 179.71922 * 17 13 11 39 39 H 1.08993 * 113.61326 * 334.48873 * 18 5 3 40 40 H 1.08997 * 113.61103 * 105.30435 * 18 5 3 41 41 H 0.96702 * 113.99809 * 179.97438 * 20 19 18 42 42 H 1.09000 * 113.61743 * 254.54470 * 25 5 3 43 43 H 1.09004 * 113.61449 * 25.44567 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2749 0.0006 6 7 4.1916 0.2076 0.7856 7 6 4.0158 0.1618 2.1210 8 8 3.4150 1.0556 2.6863 9 6 4.5514 -0.9702 2.8958 10 6 5.2439 -2.0447 2.4095 11 7 5.5488 -2.8556 3.4404 12 6 6.2846 -4.1171 3.3239 13 6 5.0780 -2.3326 4.6094 14 6 5.2312 -2.9556 5.9730 15 8 5.2866 -4.3776 5.8437 16 14 3.7766 -2.4851 7.0376 17 6 4.4497 -1.1733 4.3449 18 6 4.1096 2.6767 0.3240 19 6 5.1720 2.4292 -0.7598 20 8 6.3575 1.8018 -0.2667 21 6 5.4651 3.6581 -1.6228 22 9 5.9315 4.6976 -0.8108 23 9 6.4381 3.3376 -2.5756 24 9 4.2935 4.0627 -2.2714 25 6 4.1765 1.4475 -1.4004 26 1 -0.3634 -1.0276 -0.0005 27 1 -0.3634 0.5138 0.8899 28 1 -0.3634 0.5138 -0.8900 29 1 4.7321 -0.4661 0.3442 30 1 5.4991 -2.2158 1.3742 31 1 7.3524 -3.9260 3.4301 32 1 5.9584 -4.8016 4.1070 33 1 6.0903 -4.5622 2.3481 34 1 6.1508 -2.5966 6.4352 35 1 4.4993 -4.7667 5.4390 36 1 2.5138 -2.9409 6.4027 37 1 3.9154 -3.0937 8.3850 38 1 3.9663 -0.5216 5.0577 39 1 3.4157 3.4810 0.0797 40 1 4.5216 2.7640 1.3293 41 1 7.0294 1.6431 -0.9439 42 1 4.6438 0.5422 -1.7877 43 1 3.5009 1.9158 -2.1162 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18364788_13287730.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:18:51 Heat of formation + Delta-G solvation = -249.972003 kcal Electronic energy + Delta-G solvation = -37122.283978 eV Core-core repulsion = 31529.417533 eV Total energy + Delta-G solvation = -5592.866444 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.117 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -51.28217 -48.81223 -48.76064 -42.74152 -42.29525 -40.69602 -39.59408 -37.93741 -37.68471 -36.51079 -34.36426 -33.61556 -31.42631 -29.72430 -28.55813 -27.54466 -27.47435 -26.35185 -25.51696 -23.91086 -22.50388 -21.21994 -20.98586 -20.51518 -20.15085 -19.59153 -19.49490 -19.16506 -18.77499 -18.05554 -17.58637 -17.38722 -17.15570 -16.90314 -16.75134 -16.33367 -15.92687 -15.75760 -15.60545 -15.57718 -15.37040 -15.27686 -15.18943 -15.00478 -14.93148 -14.89956 -14.73624 -14.54168 -14.44213 -14.13028 -14.06001 -13.71726 -13.56044 -13.42523 -13.20265 -13.19241 -12.97692 -12.70224 -12.36546 -12.33685 -11.96418 -11.90808 -11.82665 -11.52120 -11.07619 -10.88228 -10.37014 -9.55794 -9.18919 -4.89147 0.70768 0.84168 1.03637 1.28909 1.46265 1.62699 1.65617 1.78088 1.87554 2.13646 2.26593 2.43520 2.50376 2.57580 2.70423 3.01354 3.17556 3.26015 3.38945 3.54740 3.65112 3.90408 4.00294 4.12896 4.20500 4.24272 4.25749 4.28816 4.42056 4.46971 4.49184 4.51553 4.54075 4.63070 4.64085 4.83968 4.97479 5.00376 5.19675 5.21238 5.66218 5.98431 6.25628 6.33853 6.34315 6.47568 6.54418 7.24117 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.351 6.351 3 C 0.469 3.531 4 O -0.524 6.524 5 C 0.171 3.829 6 N -0.678 5.678 7 C 0.597 3.403 8 O -0.582 6.582 9 C -0.259 4.259 10 C 0.079 3.921 11 N -0.425 5.425 12 C 0.046 3.954 13 C -0.023 4.023 14 C -0.041 4.041 15 O -0.538 6.538 16 Si 0.767 3.233 17 C -0.154 4.154 18 C -0.113 4.113 19 C 0.084 3.916 20 O -0.503 6.503 21 C 0.437 3.563 22 F -0.185 7.185 23 F -0.174 7.174 24 F -0.177 7.177 25 C -0.127 4.127 26 H 0.132 0.868 27 H 0.051 0.949 28 H 0.070 0.930 29 H 0.425 0.575 30 H 0.211 0.789 31 H 0.079 0.921 32 H 0.109 0.891 33 H 0.106 0.894 34 H 0.133 0.867 35 H 0.388 0.612 36 H -0.294 1.294 37 H -0.289 1.289 38 H 0.152 0.848 39 H 0.118 0.882 40 H 0.094 0.906 41 H 0.409 0.591 42 H 0.154 0.846 43 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.225 -8.562 -4.511 10.559 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.266 6.266 3 C 0.310 3.690 4 O -0.412 6.412 5 C 0.081 3.919 6 N -0.334 5.334 7 C 0.389 3.611 8 O -0.462 6.462 9 C -0.269 4.269 10 C -0.059 4.059 11 N -0.099 5.099 12 C -0.094 4.094 13 C -0.132 4.132 14 C -0.151 4.151 15 O -0.346 6.346 16 Si 0.671 3.329 17 C -0.178 4.178 18 C -0.151 4.151 19 C 0.040 3.960 20 O -0.313 6.313 21 C 0.382 3.618 22 F -0.166 7.166 23 F -0.156 7.156 24 F -0.159 7.159 25 C -0.164 4.164 26 H 0.150 0.850 27 H 0.069 0.931 28 H 0.089 0.911 29 H 0.265 0.735 30 H 0.228 0.772 31 H 0.098 0.902 32 H 0.127 0.873 33 H 0.125 0.875 34 H 0.150 0.850 35 H 0.238 0.762 36 H -0.220 1.220 37 H -0.216 1.216 38 H 0.170 0.830 39 H 0.136 0.864 40 H 0.113 0.887 41 H 0.263 0.737 42 H 0.172 0.828 43 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 3.345 -8.159 -2.842 9.265 hybrid contribution -0.031 -0.482 -1.209 1.302 sum 3.315 -8.642 -4.051 10.103 Atomic orbital electron populations 1.23558 0.74922 1.05740 1.02406 1.86497 1.24737 1.32277 1.83131 1.23954 0.91901 0.81677 0.71419 1.90684 1.67008 1.37420 1.46042 1.20631 0.84264 0.90697 0.96323 1.45037 1.53072 1.29306 1.05941 1.17703 0.77546 0.84648 0.81249 1.90797 1.44237 1.40223 1.70958 1.20115 1.13712 0.98673 0.94385 1.22446 0.98667 0.89957 0.94813 1.43723 1.41671 1.19066 1.05413 1.22742 0.97096 0.82969 1.06551 1.20754 1.05771 0.97521 0.89196 1.24673 1.13235 0.82094 0.95068 1.86541 1.45136 1.18836 1.84079 0.93353 0.73083 0.91187 0.75248 1.21785 1.04179 0.97477 0.94385 1.23425 0.94961 0.96252 1.00499 1.23031 0.88717 0.89336 0.94906 1.86705 1.26237 1.79109 1.39244 1.21201 0.74496 0.86414 0.79666 1.93222 1.88870 1.61624 1.72886 1.93206 1.63727 1.92472 1.66176 1.93206 1.48342 1.91754 1.82566 1.24083 0.96924 1.02464 0.92944 0.85025 0.93058 0.91136 0.73467 0.77240 0.90241 0.87257 0.87511 0.84990 0.76211 1.22025 1.21553 0.83048 0.86419 0.88750 0.73739 0.82819 0.85244 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.03 10.56 113.37 1.20 1.23 16 2 O -0.35 -1.70 10.41 -51.45 -0.54 -2.24 16 3 C 0.47 3.50 6.59 71.24 0.47 3.97 16 4 O -0.52 -7.16 15.66 21.97 0.34 -6.82 16 5 C 0.17 0.21 1.00 3.38 0.00 0.21 16 6 N -0.68 0.93 4.52 -427.30 -1.93 -1.00 16 7 C 0.60 3.84 7.36 86.61 0.64 4.48 16 8 O -0.58 -9.24 15.51 -4.11 -0.06 -9.30 16 9 C -0.26 -0.72 6.29 -19.04 -0.12 -0.84 16 10 C 0.08 -0.38 10.83 83.92 0.91 0.53 16 11 N -0.43 1.79 3.09 -533.25 -1.65 0.15 16 12 C 0.05 -0.45 10.70 127.77 1.37 0.92 16 13 C -0.02 0.01 6.14 40.98 0.25 0.27 16 14 C -0.04 0.11 2.98 71.24 0.21 0.33 16 15 O -0.54 1.81 9.96 -148.98 -1.48 0.33 16 16 Si 0.77 -0.82 31.12 68.60 2.13 1.32 16 17 C -0.15 -0.54 9.49 23.62 0.22 -0.32 16 18 C -0.11 -0.48 5.98 31.12 0.19 -0.29 16 19 C 0.08 -0.25 1.36 -10.27 -0.01 -0.26 16 20 O -0.50 3.05 12.91 -148.98 -1.92 1.13 16 21 C 0.44 0.05 2.85 71.98 0.21 0.25 16 22 F -0.18 -0.92 17.18 44.97 0.77 -0.14 16 23 F -0.17 0.33 16.65 44.97 0.75 1.08 16 24 F -0.18 -0.40 15.76 44.97 0.71 0.31 16 25 C -0.13 0.85 6.63 31.12 0.21 1.06 16 26 H 0.13 -0.68 8.14 -2.39 -0.02 -0.69 16 27 H 0.05 0.22 8.13 -2.39 -0.02 0.20 16 28 H 0.07 0.00 8.13 -2.38 -0.02 -0.01 16 29 H 0.43 -4.08 7.62 -92.71 -0.71 -4.78 16 30 H 0.21 -2.95 7.46 -2.91 -0.02 -2.98 16 31 H 0.08 -0.78 8.14 -2.39 -0.02 -0.80 16 32 H 0.11 -1.01 4.92 -2.39 -0.01 -1.02 16 33 H 0.11 -1.54 8.13 -2.39 -0.02 -1.56 16 34 H 0.13 -0.59 7.96 -2.38 -0.02 -0.61 16 35 H 0.39 -3.16 8.35 -74.06 -0.62 -3.78 16 36 H -0.29 -1.49 7.11 99.48 0.71 -0.78 16 37 H -0.29 -1.39 7.11 99.48 0.71 -0.69 16 38 H 0.15 0.50 6.89 -2.91 -0.02 0.48 16 39 H 0.12 0.76 7.09 -2.39 -0.02 0.74 16 40 H 0.09 0.84 7.19 -2.39 -0.02 0.83 16 41 H 0.41 -5.80 8.42 -74.06 -0.62 -6.42 16 42 H 0.15 -2.30 8.09 -2.39 -0.02 -2.31 16 43 H 0.13 -0.84 7.10 -2.38 -0.02 -0.85 16 Total: 0.00 -30.80 377.53 2.09 -28.71 By element: Atomic # 1 Polarization: -24.27 SS G_CDS: -0.78 Total: -25.04 kcal Atomic # 6 Polarization: 5.79 SS G_CDS: 5.74 Total: 11.52 kcal Atomic # 7 Polarization: 2.72 SS G_CDS: -3.58 Total: -0.85 kcal Atomic # 8 Polarization: -13.24 SS G_CDS: -3.66 Total: -16.90 kcal Atomic # 9 Polarization: -0.98 SS G_CDS: 2.23 Total: 1.25 kcal Atomic # 14 Polarization: -0.82 SS G_CDS: 2.13 Total: 1.32 kcal Total: -30.80 2.09 -28.71 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_13287730.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -221.261 kcal (2) G-P(sol) polarization free energy of solvation -30.797 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -252.058 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.086 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.711 kcal (6) G-S(sol) free energy of system = (1) + (5) -249.972 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds