Wall clock time and date at job start Tue Mar 9 2021 14:18:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34227 * 116.99848 * 2 1 4 4 O 1.20825 * 120.00433 * 0.02562 * 3 2 1 5 5 C 1.50697 * 119.99865 * 180.02562 * 3 2 1 6 6 N 1.46497 * 112.85542 * 25.32924 * 5 3 2 7 7 C 1.34779 * 119.99970 * 309.67115 * 6 5 3 8 8 O 1.21284 * 120.00014 * 359.97438 * 7 6 5 9 9 C 1.50700 * 120.00392 * 179.97438 * 7 6 5 10 10 C 1.50693 * 109.47154 * 180.02562 * 9 7 6 11 11 C 1.38277 * 119.93838 * 90.00214 * 10 9 7 12 12 C 1.38123 * 120.06608 * 180.02562 * 11 10 9 13 13 C 1.38825 * 119.93254 * 0.02562 * 12 11 10 14 14 N 1.40202 * 120.06238 * 179.97438 * 13 12 11 15 15 C 1.36570 * 125.67008 * 235.90292 * 14 13 12 16 16 C 1.34850 * 108.20163 * 180.29653 * 15 14 13 17 17 C 1.40936 * 107.46669 * 359.73460 * 16 15 14 18 18 C 1.34847 * 107.47328 * 359.97438 * 17 16 15 19 19 C 1.50697 * 125.90412 * 180.02562 * 18 17 16 20 20 O 1.42901 * 109.47095 * 217.32738 * 19 18 17 21 21 Si 1.86294 * 109.46986 * 337.32425 * 19 18 17 22 22 C 1.38815 * 119.87232 * 0.24844 * 13 12 11 23 23 C 1.38130 * 119.93570 * 359.49495 * 22 13 12 24 24 C 1.53788 * 113.61475 * 254.13273 * 5 3 2 25 25 C 1.54051 * 86.98608 * 219.97951 * 24 5 3 26 26 O 1.42897 * 113.61612 * 270.88307 * 25 24 5 27 27 C 1.53005 * 113.69022 * 139.98723 * 25 24 5 28 28 F 1.39891 * 109.47591 * 322.46935 * 27 25 24 29 29 F 1.39899 * 109.46972 * 82.46965 * 27 25 24 30 30 F 1.39898 * 109.46849 * 202.46525 * 27 25 24 31 31 C 1.53782 * 87.07656 * 25.43432 * 25 24 5 32 32 H 1.09005 * 109.46940 * 180.02562 * 1 2 3 33 33 H 1.09008 * 109.47295 * 299.99951 * 1 2 3 34 34 H 1.08996 * 109.47609 * 59.99882 * 1 2 3 35 35 H 0.97001 * 120.00161 * 129.66368 * 6 5 3 36 36 H 1.08994 * 109.46580 * 59.99797 * 9 7 6 37 37 H 1.09006 * 109.46662 * 300.00220 * 9 7 6 38 38 H 1.08000 * 119.96613 * 0.03899 * 11 10 9 39 39 H 1.08001 * 120.03180 * 180.02562 * 12 11 10 40 40 H 1.08001 * 125.89793 * 0.02611 * 15 14 13 41 41 H 1.08000 * 126.26797 * 179.73290 * 16 15 14 42 42 H 1.08001 * 126.26777 * 180.02562 * 17 16 15 43 43 H 1.08994 * 109.47379 * 97.32902 * 19 18 17 44 44 H 0.96696 * 114.00289 * 65.49343 * 20 19 18 45 45 H 1.48502 * 110.00261 * 58.68144 * 21 19 18 46 46 H 1.48501 * 110.00092 * 180.02562 * 21 19 18 47 47 H 1.08004 * 120.03560 * 179.72725 * 22 13 12 48 48 H 1.07999 * 119.97178 * 180.25229 * 23 22 13 49 49 H 1.09001 * 113.61353 * 334.48412 * 24 5 3 50 50 H 1.08998 * 113.61228 * 105.38545 * 24 5 3 51 51 H 0.96702 * 114.00083 * 277.49862 * 26 25 24 52 52 H 1.09002 * 113.60889 * 220.02004 * 31 25 24 53 53 H 1.09002 * 113.61782 * 89.11620 * 31 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5662 1.2749 -0.0006 6 7 4.1981 0.0863 -0.5786 7 6 3.8371 -1.1417 -0.1561 8 8 2.9895 -1.2626 0.7029 9 6 4.4866 -2.3644 -0.7511 10 6 3.9097 -3.6011 -0.1117 11 6 2.7963 -4.2077 -0.6632 12 6 2.2650 -5.3410 -0.0791 13 6 2.8497 -5.8705 1.0633 14 7 2.3124 -7.0204 1.6588 15 6 1.9034 -7.1278 2.9574 16 6 1.4544 -8.3838 3.1551 17 6 1.5843 -9.0766 1.9347 18 6 2.1075 -8.2184 1.0357 19 6 2.4187 -8.5294 -0.4056 20 8 3.6227 -7.8612 -0.7878 21 14 2.6370 -10.3681 -0.6110 22 6 3.9640 -5.2561 1.6179 23 6 4.4941 -4.1261 1.0263 24 6 4.1618 1.6916 1.3547 25 6 5.1658 2.5468 0.5586 26 8 6.3553 1.8433 0.1951 27 6 5.4517 3.9093 1.1934 28 9 4.2745 4.4211 1.7493 29 9 6.4160 3.7633 2.1963 30 9 5.9263 4.7892 0.2148 31 6 4.1135 2.5979 -0.5617 32 1 -0.3633 -1.0277 0.0005 33 1 -0.3634 0.5139 0.8900 34 1 -0.3634 0.5138 -0.8899 35 1 4.8762 0.1829 -1.2655 36 1 5.5610 -2.3291 -0.5708 37 1 4.2990 -2.3895 -1.8246 38 1 2.3417 -3.7951 -1.5518 39 1 1.3955 -5.8146 -0.5105 40 1 1.9382 -6.3435 3.6991 41 1 1.0662 -8.7854 4.0795 42 1 1.3136 -10.1061 1.7525 43 1 1.5980 -8.1882 -1.0364 44 1 4.4113 -8.1764 -0.3254 45 1 1.4028 -11.0766 -0.1866 46 1 2.9450 -10.6878 -2.0281 47 1 4.4184 -5.6633 2.5091 48 1 5.3635 -3.6499 1.4550 49 1 3.4795 2.2784 1.9696 50 1 4.6234 0.8686 1.9003 51 1 7.0208 1.8077 0.8958 52 1 4.5363 2.5062 -1.5622 53 1 3.4180 3.4321 -0.4698 There are 83 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 83 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18364788_13287746.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:18:58 Heat of formation + Delta-G solvation = -208.611156 kcal Electronic energy + Delta-G solvation = -47650.885998 eV Core-core repulsion = 41235.833295 eV Total energy + Delta-G solvation = -6415.052703 eV No. of doubly occupied orbitals = 83 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 455.148 amu Computer time = 1.82 seconds Orbital eigenvalues (eV) -51.30048 -48.84476 -48.76917 -42.69317 -42.61829 -40.76498 -40.34776 -39.33614 -37.66890 -37.59761 -36.46553 -34.79637 -34.13881 -32.09116 -31.77541 -31.03655 -29.72113 -28.58521 -27.65632 -27.54701 -26.04418 -25.53134 -23.90199 -23.55585 -22.53178 -21.75021 -21.43386 -20.67731 -20.58532 -20.20227 -19.61658 -19.49830 -19.22228 -18.95346 -18.31479 -17.68253 -17.54289 -17.38047 -17.21692 -16.97966 -16.58417 -16.36625 -16.14161 -15.76324 -15.74984 -15.62433 -15.48037 -15.35215 -15.21363 -15.20251 -15.02220 -14.94510 -14.85383 -14.81089 -14.64701 -14.47635 -14.43286 -14.35647 -14.19887 -14.13762 -13.94651 -13.79278 -13.57057 -13.33762 -13.19965 -13.06426 -12.87658 -12.78103 -12.52523 -12.27452 -12.14884 -12.00319 -11.92861 -11.89094 -11.81390 -11.38822 -10.84526 -10.72088 -10.26622 -10.20680 -9.92440 -9.18958 -9.07926 -4.95772 0.06609 0.42097 0.83597 1.08871 1.30340 1.34869 1.65184 1.66920 1.77337 1.88177 1.88931 1.97493 2.11737 2.24088 2.45194 2.49491 2.67058 2.75315 2.97506 3.26247 3.35744 3.41749 3.64997 3.67517 3.71643 3.81988 3.94023 4.01196 4.12130 4.15336 4.15833 4.21563 4.23453 4.29377 4.37590 4.39528 4.43183 4.49988 4.51953 4.55030 4.55708 4.60332 4.68618 4.69454 4.89534 5.02950 5.21119 5.23867 5.24883 5.27365 5.28401 5.40135 5.57399 5.85808 5.93563 6.18706 6.23618 6.51050 6.53238 6.55183 6.65492 7.30807 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.317 6.317 3 C 0.463 3.537 4 O -0.531 6.531 5 C 0.170 3.830 6 N -0.691 5.691 7 C 0.511 3.489 8 O -0.524 6.524 9 C -0.092 4.092 10 C -0.061 4.061 11 C -0.094 4.094 12 C -0.109 4.109 13 C 0.117 3.883 14 N -0.394 5.394 15 C -0.017 4.017 16 C -0.201 4.201 17 C -0.206 4.206 18 C -0.017 4.017 19 C -0.051 4.051 20 O -0.545 6.545 21 Si 0.804 3.196 22 C -0.121 4.121 23 C -0.091 4.091 24 C -0.146 4.146 25 C 0.088 3.912 26 O -0.500 6.500 27 C 0.435 3.565 28 F -0.181 7.181 29 F -0.180 7.180 30 F -0.178 7.178 31 C -0.101 4.101 32 H 0.112 0.888 33 H 0.055 0.945 34 H 0.063 0.937 35 H 0.428 0.572 36 H 0.138 0.862 37 H 0.126 0.874 38 H 0.134 0.866 39 H 0.109 0.891 40 H 0.174 0.826 41 H 0.153 0.847 42 H 0.150 0.850 43 H 0.101 0.899 44 H 0.389 0.611 45 H -0.284 1.284 46 H -0.289 1.289 47 H 0.134 0.866 48 H 0.149 0.851 49 H 0.108 0.892 50 H 0.115 0.885 51 H 0.409 0.591 52 H 0.135 0.865 53 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.274 -2.089 -1.843 7.789 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.230 6.230 3 C 0.306 3.694 4 O -0.421 6.421 5 C 0.080 3.920 6 N -0.349 5.349 7 C 0.299 3.701 8 O -0.399 6.399 9 C -0.132 4.132 10 C -0.062 4.062 11 C -0.113 4.113 12 C -0.128 4.128 13 C 0.028 3.972 14 N -0.067 5.067 15 C -0.145 4.145 16 C -0.224 4.224 17 C -0.231 4.231 18 C -0.127 4.127 19 C -0.161 4.161 20 O -0.352 6.352 21 Si 0.708 3.292 22 C -0.140 4.140 23 C -0.109 4.109 24 C -0.185 4.185 25 C 0.043 3.957 26 O -0.309 6.309 27 C 0.380 3.620 28 F -0.162 7.162 29 F -0.162 7.162 30 F -0.160 7.160 31 C -0.139 4.139 32 H 0.131 0.869 33 H 0.074 0.926 34 H 0.081 0.919 35 H 0.268 0.732 36 H 0.155 0.845 37 H 0.144 0.856 38 H 0.152 0.848 39 H 0.127 0.873 40 H 0.192 0.808 41 H 0.171 0.829 42 H 0.167 0.833 43 H 0.118 0.882 44 H 0.238 0.762 45 H -0.210 1.210 46 H -0.216 1.216 47 H 0.151 0.849 48 H 0.167 0.833 49 H 0.127 0.873 50 H 0.133 0.867 51 H 0.263 0.737 52 H 0.154 0.846 53 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 5.579 -2.094 -2.681 6.534 hybrid contribution -0.650 1.066 0.683 1.423 sum 4.929 -1.028 -1.998 5.417 Atomic orbital electron populations 1.23416 0.76978 1.04538 1.02036 1.87028 1.22966 1.31067 1.81976 1.23974 0.91857 0.81922 0.71652 1.90696 1.67035 1.37372 1.46957 1.20600 0.84610 0.88930 0.97848 1.45502 1.43379 1.02522 1.43462 1.21013 0.82068 0.84501 0.82566 1.90813 1.31253 1.86165 1.31637 1.20692 1.02836 0.87261 1.02370 1.19504 0.95332 0.95780 0.95585 1.20980 0.95620 0.94526 1.00148 1.20892 0.99610 0.96618 0.95702 1.17736 0.95554 0.88128 0.95794 1.41562 1.47571 1.08111 1.09457 1.22296 1.06127 1.00150 0.85933 1.21165 1.07998 0.93835 0.99449 1.20967 1.08214 1.00252 0.93620 1.21255 1.08991 0.85883 0.96532 1.24951 0.89564 1.11979 0.89600 1.86480 1.16700 1.64712 1.67270 0.93049 0.85710 0.71010 0.79468 1.21129 0.94438 0.97309 1.01101 1.21095 1.00385 0.94840 0.94622 1.24159 0.97601 1.00962 0.95802 1.23047 0.88658 0.86058 0.97916 1.86553 1.26098 1.73909 1.44360 1.21272 0.74304 0.89430 0.76998 1.93210 1.48074 1.88795 1.86137 1.93200 1.64474 1.95810 1.62666 1.93228 1.88519 1.71994 1.62213 1.23496 0.94472 0.95285 1.00607 0.86941 0.92606 0.91852 0.73237 0.84452 0.85564 0.84798 0.87336 0.80850 0.82943 0.83288 0.88156 0.76213 1.21040 1.21608 0.84861 0.83333 0.87329 0.86651 0.73709 0.84639 0.85502 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.09 10.56 113.37 1.20 1.29 16 2 O -0.32 -2.08 6.31 -43.40 -0.27 -2.36 16 3 C 0.46 2.58 7.07 71.23 0.50 3.08 16 4 O -0.53 -5.54 15.79 21.97 0.35 -5.19 16 5 C 0.17 -0.36 1.11 3.39 0.00 -0.36 16 6 N -0.69 4.70 4.76 -423.91 -2.02 2.69 16 7 C 0.51 -1.62 7.17 87.66 0.63 -0.99 16 8 O -0.52 -2.82 12.57 21.08 0.26 -2.55 16 9 C -0.09 0.79 5.83 29.10 0.17 0.96 16 10 C -0.06 0.13 4.37 -19.85 -0.09 0.04 16 11 C -0.09 -0.11 9.69 22.25 0.22 0.11 16 12 C -0.11 -0.50 8.48 22.38 0.19 -0.31 16 13 C 0.12 0.50 4.68 38.08 0.18 0.68 16 14 N -0.39 -2.09 2.84 -333.42 -0.95 -3.03 16 15 C -0.02 -0.08 11.21 83.18 0.93 0.85 16 16 C -0.20 -0.89 10.86 22.15 0.24 -0.65 16 17 C -0.21 -0.92 9.40 22.15 0.21 -0.71 16 18 C -0.02 -0.07 6.12 41.04 0.25 0.18 16 19 C -0.05 -0.08 2.50 71.24 0.18 0.10 16 20 O -0.55 -0.47 10.86 -148.98 -1.62 -2.08 16 21 Si 0.80 -1.14 30.96 68.60 2.12 0.98 16 22 C -0.12 -0.13 9.76 22.38 0.22 0.09 16 23 C -0.09 0.17 9.69 22.25 0.22 0.39 16 24 C -0.15 0.46 6.70 31.22 0.21 0.67 16 25 C 0.09 -0.51 1.36 -10.17 -0.01 -0.52 16 26 O -0.50 5.05 12.78 -148.98 -1.90 3.15 16 27 C 0.43 -0.66 2.85 71.98 0.21 -0.45 16 28 F -0.18 -0.39 15.77 44.97 0.71 0.32 16 29 F -0.18 0.26 16.65 44.97 0.75 1.01 16 30 F -0.18 -0.14 17.18 44.97 0.77 0.63 16 31 C -0.10 0.49 6.41 31.12 0.20 0.69 16 32 H 0.11 0.06 8.14 -2.38 -0.02 0.04 16 33 H 0.06 0.26 8.13 -2.38 -0.02 0.24 16 34 H 0.06 0.17 8.13 -2.39 -0.02 0.15 16 35 H 0.43 -5.35 8.47 -92.71 -0.79 -6.14 16 36 H 0.14 -1.96 8.08 -2.39 -0.02 -1.98 16 37 H 0.13 -1.55 8.08 -2.38 -0.02 -1.57 16 38 H 0.13 -0.21 8.06 -2.91 -0.02 -0.23 16 39 H 0.11 0.65 8.06 -2.91 -0.02 0.63 16 40 H 0.17 0.22 8.06 -2.91 -0.02 0.20 16 41 H 0.15 0.16 8.06 -2.91 -0.02 0.14 16 42 H 0.15 0.30 6.45 -2.91 -0.02 0.28 16 43 H 0.10 0.31 7.96 -2.39 -0.02 0.29 16 44 H 0.39 -2.15 8.60 -74.06 -0.64 -2.79 16 45 H -0.28 -0.98 6.85 99.48 0.68 -0.30 16 46 H -0.29 -1.24 7.11 99.48 0.71 -0.54 16 47 H 0.13 -0.12 8.06 -2.91 -0.02 -0.14 16 48 H 0.15 -1.00 8.06 -2.91 -0.02 -1.02 16 49 H 0.11 -0.05 7.10 -2.39 -0.02 -0.07 16 50 H 0.12 -0.51 8.14 -2.39 -0.02 -0.53 16 51 H 0.41 -6.23 8.42 -74.06 -0.62 -6.85 16 52 H 0.14 -1.28 8.12 -2.39 -0.02 -1.30 16 53 H 0.13 -0.28 7.12 -2.39 -0.02 -0.29 16 Total: 0.00 -26.12 455.54 3.04 -23.07 By element: Atomic # 1 Polarization: -20.77 SS G_CDS: -1.01 Total: -21.78 kcal Atomic # 6 Polarization: -0.70 SS G_CDS: 5.84 Total: 5.14 kcal Atomic # 7 Polarization: 2.61 SS G_CDS: -2.96 Total: -0.35 kcal Atomic # 8 Polarization: -5.85 SS G_CDS: -3.18 Total: -9.03 kcal Atomic # 9 Polarization: -0.27 SS G_CDS: 2.23 Total: 1.96 kcal Atomic # 14 Polarization: -1.14 SS G_CDS: 2.12 Total: 0.98 kcal Total: -26.12 3.04 -23.07 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_13287746.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -185.537 kcal (2) G-P(sol) polarization free energy of solvation -26.119 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -211.656 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.045 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.074 kcal (6) G-S(sol) free energy of system = (1) + (5) -208.611 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.82 seconds