Wall clock time and date at job start Tue Mar 9 2021 14:19:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34236 * 116.99923 * 2 1 4 4 O 1.20828 * 119.99687 * 359.97438 * 3 2 1 5 5 C 1.50704 * 120.00015 * 180.02562 * 3 2 1 6 6 N 1.46500 * 112.84691 * 324.46203 * 5 3 2 7 7 C 1.34771 * 120.00269 * 294.08654 * 6 5 3 8 8 O 1.21556 * 120.00125 * 354.99869 * 7 6 5 9 9 C 1.47844 * 120.00262 * 175.27493 * 7 6 5 10 10 C 1.39517 * 120.55472 * 359.44713 * 9 7 6 11 11 N 1.31700 * 120.56355 * 179.72778 * 10 9 7 12 12 C 1.31922 * 121.87730 * 0.53348 * 11 10 9 13 13 C 1.38355 * 121.08452 * 359.75526 * 12 11 10 14 14 C 1.50697 * 120.35196 * 179.97438 * 13 12 11 15 15 O 1.42903 * 109.46785 * 245.02056 * 14 13 12 16 16 Si 1.86295 * 109.47188 * 5.01574 * 14 13 12 17 17 C 1.38360 * 119.29754 * 359.97178 * 13 12 11 18 18 C 1.53780 * 113.61303 * 193.27010 * 5 3 2 19 19 C 1.53775 * 87.07819 * 219.93318 * 18 5 3 20 20 O 1.42898 * 113.61460 * 270.79878 * 19 18 5 21 21 C 1.53000 * 113.61452 * 139.98263 * 19 18 5 22 22 F 1.39898 * 109.47426 * 59.99728 * 21 19 18 23 23 F 1.39902 * 109.47226 * 179.97438 * 21 19 18 24 24 F 1.39900 * 109.47027 * 299.99664 * 21 19 18 25 25 C 1.53777 * 87.08594 * 25.43131 * 19 18 5 26 26 H 1.09001 * 109.46834 * 60.00452 * 1 2 3 27 27 H 1.09004 * 109.46567 * 180.02562 * 1 2 3 28 28 H 1.08996 * 109.47355 * 300.00028 * 1 2 3 29 29 H 0.96998 * 119.99699 * 114.08103 * 6 5 3 30 30 H 1.08000 * 119.71961 * 359.97438 * 10 9 7 31 31 H 1.07997 * 119.45870 * 179.72681 * 12 11 10 32 32 H 1.08999 * 109.47605 * 125.02078 * 14 13 12 33 33 H 0.96698 * 113.99813 * 179.97438 * 15 14 13 34 34 H 1.48498 * 110.00236 * 178.68143 * 16 14 13 35 35 H 1.48507 * 110.00277 * 300.00739 * 16 14 13 36 36 H 1.07999 * 120.85262 * 180.02562 * 17 13 12 37 37 H 1.09003 * 113.61062 * 334.47634 * 18 5 3 38 38 H 1.09002 * 113.61271 * 105.38184 * 18 5 3 39 39 H 0.96704 * 114.00252 * 180.02562 * 20 19 18 40 40 H 1.08992 * 113.61930 * 220.02062 * 25 19 18 41 41 H 1.09008 * 113.61346 * 89.11179 * 25 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5664 1.2750 -0.0006 6 7 4.1922 0.2075 0.7837 7 6 4.0176 0.1614 2.1192 8 8 3.4177 1.0546 2.6849 9 6 4.5610 -0.9722 2.8972 10 6 5.2465 -2.0064 2.2592 11 7 5.7353 -3.0137 2.9527 12 6 5.5912 -3.0934 4.2616 13 6 4.9192 -2.1113 4.9673 14 6 4.7639 -2.2192 6.4624 15 8 3.3805 -2.3690 6.7878 16 14 5.7108 -3.7000 7.0798 17 6 4.3915 -1.0289 4.2859 18 6 4.1098 2.6767 0.3229 19 6 5.1714 2.4294 -0.7618 20 8 6.3580 1.8037 -0.2694 21 6 5.4625 3.6581 -1.6259 22 9 5.9284 4.6986 -0.8152 23 9 6.4357 3.3382 -2.5786 24 9 4.2898 4.0610 -2.2737 25 6 4.1755 1.4480 -1.4019 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3632 -1.0277 0.0005 28 1 -0.3634 0.5138 0.8899 29 1 4.7322 -0.4662 0.3416 30 1 5.3809 -1.9788 1.1879 31 1 6.0042 -3.9393 4.7908 32 1 5.1525 -1.3168 6.9342 33 1 3.2055 -2.4450 7.7358 34 1 5.5917 -3.7993 8.5567 35 1 5.1905 -4.9370 6.4439 36 1 3.8626 -0.2478 4.8117 37 1 3.4157 3.4810 0.0792 38 1 4.5239 2.7633 1.3275 39 1 7.0297 1.6459 -0.9469 40 1 4.6426 0.5428 -1.7898 41 1 3.4993 1.9165 -2.1171 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18364788_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:19:04 Heat of formation + Delta-G solvation = -256.188794 kcal Electronic energy + Delta-G solvation = -36332.848899 eV Core-core repulsion = 30767.024353 eV Total energy + Delta-G solvation = -5565.824546 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.101 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -51.31036 -48.85980 -48.74844 -42.80771 -41.68315 -40.66312 -39.74143 -38.06433 -37.60701 -36.71576 -34.70235 -33.88454 -32.95281 -29.81749 -28.60067 -27.70278 -27.36109 -26.21957 -25.25431 -23.81534 -22.60139 -22.03072 -20.87612 -20.30698 -19.63870 -19.56588 -19.24235 -18.88663 -18.72132 -18.09604 -18.07910 -17.77455 -17.38741 -17.15891 -16.48190 -16.32419 -16.14010 -15.84199 -15.61552 -15.56101 -15.38710 -15.20629 -15.14807 -14.96079 -14.91061 -14.86997 -14.72513 -14.44685 -14.28605 -14.17994 -14.13674 -13.94773 -13.83353 -13.57210 -13.24090 -12.86930 -12.74094 -12.38711 -12.11897 -11.89523 -11.83739 -11.69184 -11.40722 -11.05731 -10.77865 -10.56376 -10.49463 -10.29637 -5.11458 -0.59927 -0.01953 0.87625 1.07923 1.20251 1.44960 1.50407 1.55050 1.72739 1.81227 2.10513 2.28576 2.40561 2.55616 2.58322 2.84189 2.97424 3.12385 3.17166 3.27727 3.46890 3.49603 3.63098 3.65634 3.73894 3.91780 4.03041 4.04217 4.09991 4.12526 4.15979 4.22313 4.33300 4.37561 4.56328 4.61043 4.80314 4.90540 4.96308 5.25373 5.28459 5.87905 6.08535 6.27305 6.56881 6.61752 6.88277 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.350 6.350 3 C 0.472 3.528 4 O -0.485 6.485 5 C 0.173 3.827 6 N -0.691 5.691 7 C 0.575 3.425 8 O -0.518 6.518 9 C -0.186 4.186 10 C 0.144 3.856 11 N -0.476 5.476 12 C 0.133 3.867 13 C -0.132 4.132 14 C -0.073 4.073 15 O -0.535 6.535 16 Si 0.684 3.316 17 C 0.015 3.985 18 C -0.101 4.101 19 C 0.066 3.934 20 O -0.501 6.501 21 C 0.439 3.561 22 F -0.169 7.169 23 F -0.179 7.179 24 F -0.170 7.170 25 C -0.144 4.144 26 H 0.066 0.934 27 H 0.105 0.895 28 H 0.066 0.934 29 H 0.411 0.589 30 H 0.162 0.838 31 H 0.164 0.836 32 H 0.083 0.917 33 H 0.384 0.616 34 H -0.255 1.255 35 H -0.249 1.249 36 H 0.151 0.849 37 H 0.133 0.867 38 H 0.117 0.883 39 H 0.394 0.606 40 H 0.115 0.885 41 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.650 -4.078 -0.824 5.535 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.266 6.266 3 C 0.312 3.688 4 O -0.370 6.370 5 C 0.083 3.917 6 N -0.346 5.346 7 C 0.363 3.637 8 O -0.394 6.394 9 C -0.191 4.191 10 C -0.015 4.015 11 N -0.183 5.183 12 C -0.023 4.023 13 C -0.134 4.134 14 C -0.183 4.183 15 O -0.342 6.342 16 Si 0.584 3.416 17 C -0.012 4.012 18 C -0.138 4.138 19 C 0.022 3.978 20 O -0.308 6.308 21 C 0.384 3.616 22 F -0.151 7.151 23 F -0.161 7.161 24 F -0.152 7.152 25 C -0.181 4.181 26 H 0.085 0.915 27 H 0.123 0.877 28 H 0.084 0.916 29 H 0.250 0.750 30 H 0.179 0.821 31 H 0.181 0.819 32 H 0.101 0.899 33 H 0.233 0.767 34 H -0.179 1.179 35 H -0.174 1.174 36 H 0.169 0.831 37 H 0.151 0.849 38 H 0.135 0.865 39 H 0.244 0.756 40 H 0.134 0.866 41 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 3.001 -4.491 -0.545 5.429 hybrid contribution -1.070 0.859 0.156 1.381 sum 1.931 -3.632 -0.389 4.132 Atomic orbital electron populations 1.23377 0.75504 1.04180 1.02936 1.86501 1.23990 1.32613 1.83477 1.23303 0.90697 0.82074 0.72756 1.90720 1.65902 1.36308 1.44114 1.20658 0.85762 0.90797 0.94469 1.45268 1.53183 1.29506 1.06673 1.18021 0.79018 0.85402 0.81297 1.90854 1.40942 1.37823 1.69733 1.20823 1.05280 0.97833 0.95180 1.23019 0.90377 0.87883 1.00194 1.67762 1.18972 1.23811 1.07803 1.22902 0.93042 0.96232 0.90137 1.20285 1.01278 0.96213 0.95592 1.24707 0.88572 1.10747 0.94316 1.86588 1.22248 1.95561 1.29837 0.95097 0.88954 0.76929 0.80650 1.21594 0.91210 0.96248 0.92117 1.23492 0.93955 0.95578 1.00824 1.23314 0.88487 0.89674 0.96287 1.86697 1.26086 1.79659 1.38391 1.20950 0.74733 0.86306 0.79622 1.93253 1.88693 1.60646 1.72467 1.93205 1.63905 1.92596 1.66351 1.93224 1.47830 1.91651 1.82470 1.24054 0.97926 1.01518 0.94644 0.91476 0.87706 0.91561 0.75038 0.82067 0.81933 0.89867 0.76724 1.17941 1.17396 0.83132 0.84870 0.86490 0.75569 0.86625 0.85269 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.07 16 2 O -0.35 -0.62 10.42 -39.27 -0.41 -1.03 16 3 C 0.47 1.18 6.59 36.01 0.24 1.42 16 4 O -0.49 -2.45 15.66 -18.75 -0.29 -2.74 16 5 C 0.17 -0.05 1.00 -132.16 -0.13 -0.18 16 6 N -0.69 0.88 4.48 -48.86 -0.22 0.66 16 7 C 0.58 0.93 7.33 -12.33 -0.09 0.84 16 8 O -0.52 -2.68 14.96 5.32 0.08 -2.60 16 9 C -0.19 -0.13 5.89 -104.82 -0.62 -0.74 16 10 C 0.14 -0.11 10.71 -17.13 -0.18 -0.29 16 11 N -0.48 -0.33 10.35 -12.91 -0.13 -0.47 16 12 C 0.13 0.00 9.84 -17.47 -0.17 -0.17 16 13 C -0.13 -0.03 5.38 -104.54 -0.56 -0.60 16 14 C -0.07 0.09 2.81 36.00 0.10 0.19 16 15 O -0.53 -0.12 12.82 -35.23 -0.45 -0.57 16 16 Si 0.68 -1.61 29.88 -169.99 -5.08 -6.69 16 17 C 0.01 0.02 9.38 -38.87 -0.36 -0.35 16 18 C -0.10 -0.04 5.98 -25.92 -0.15 -0.20 16 19 C 0.07 -0.13 1.36 -89.81 -0.12 -0.25 16 20 O -0.50 1.55 12.92 -35.23 -0.46 1.09 16 21 C 0.44 -0.21 2.85 37.16 0.11 -0.10 16 22 F -0.17 -0.25 17.18 2.25 0.04 -0.21 16 23 F -0.18 0.15 16.65 2.25 0.04 0.19 16 24 F -0.17 -0.07 15.75 2.25 0.04 -0.04 16 25 C -0.14 0.47 6.63 -25.92 -0.17 0.30 16 26 H 0.07 -0.04 8.13 -51.93 -0.42 -0.46 16 27 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 28 H 0.07 0.06 8.13 -51.93 -0.42 -0.36 16 29 H 0.41 -1.81 6.75 -40.82 -0.28 -2.09 16 30 H 0.16 -0.69 6.44 -52.49 -0.34 -1.03 16 31 H 0.16 -0.33 4.87 -52.49 -0.26 -0.59 16 32 H 0.08 -0.24 7.96 -51.93 -0.41 -0.66 16 33 H 0.38 -1.45 8.74 45.56 0.40 -1.05 16 34 H -0.25 0.06 7.11 56.52 0.40 0.47 16 35 H -0.25 -0.13 7.05 56.52 0.40 0.27 16 36 H 0.15 0.26 7.74 -52.49 -0.41 -0.15 16 37 H 0.13 0.13 7.09 -51.93 -0.37 -0.24 16 38 H 0.12 0.22 7.20 -51.93 -0.37 -0.15 16 39 H 0.39 -2.57 8.42 45.56 0.38 -2.18 16 40 H 0.12 -0.71 8.09 -51.93 -0.42 -1.13 16 41 H 0.13 -0.43 7.09 -51.92 -0.37 -0.80 16 LS Contribution 366.31 15.07 5.52 5.52 Total: 0.00 -11.47 366.31 -5.29 -16.76 By element: Atomic # 1 Polarization: -7.91 SS G_CDS: -2.90 Total: -10.82 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: -1.06 Total: 0.94 kcal Atomic # 7 Polarization: 0.55 SS G_CDS: -0.35 Total: 0.19 kcal Atomic # 8 Polarization: -4.32 SS G_CDS: -1.53 Total: -5.85 kcal Atomic # 9 Polarization: -0.17 SS G_CDS: 0.11 Total: -0.06 kcal Atomic # 14 Polarization: -1.61 SS G_CDS: -5.08 Total: -6.69 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -11.47 -5.29 -16.76 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -239.425 kcal (2) G-P(sol) polarization free energy of solvation -11.470 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -250.895 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.294 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.764 kcal (6) G-S(sol) free energy of system = (1) + (5) -256.189 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds