Wall clock time and date at job start Tue Mar 9 2021 14:19:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34237 * 116.99648 * 2 1 4 4 O 1.20822 * 120.00051 * 0.02562 * 3 2 1 5 5 C 1.50698 * 119.99564 * 179.97438 * 3 2 1 6 6 N 1.46504 * 112.85176 * 324.46444 * 5 3 2 7 7 C 1.34778 * 119.99662 * 294.08149 * 6 5 3 8 8 O 1.21278 * 120.00400 * 355.00567 * 7 6 5 9 9 C 1.50707 * 119.99557 * 175.00569 * 7 6 5 10 10 C 1.53546 * 109.87115 * 278.24023 * 9 7 6 11 11 C 1.53052 * 108.54954 * 179.47179 * 10 9 7 12 12 C 1.50204 * 110.31658 * 49.57882 * 11 10 9 13 13 C 1.50703 * 118.54914 * 160.23310 * 12 11 10 14 14 O 1.42901 * 109.46881 * 299.73786 * 13 12 11 15 15 Si 1.86297 * 109.47394 * 179.73105 * 13 12 11 16 16 C 1.31121 * 122.90493 * 339.95666 * 12 11 10 17 17 N 1.38920 * 121.85041 * 0.37944 * 16 12 11 18 18 C 1.53783 * 113.61366 * 193.26960 * 5 3 2 19 19 C 1.53778 * 87.07989 * 219.93450 * 18 5 3 20 20 O 1.42900 * 113.61457 * 270.88157 * 19 18 5 21 21 C 1.53009 * 113.61151 * 140.06605 * 19 18 5 22 22 F 1.39894 * 109.47357 * 59.99805 * 21 19 18 23 23 F 1.39897 * 109.46698 * 180.02562 * 21 19 18 24 24 F 1.39902 * 109.46670 * 299.99754 * 21 19 18 25 25 C 1.53778 * 113.69200 * 95.73283 * 5 3 2 26 26 H 1.08997 * 109.46936 * 179.97438 * 1 2 3 27 27 H 1.09000 * 109.46976 * 300.00102 * 1 2 3 28 28 H 1.09000 * 109.46934 * 60.00099 * 1 2 3 29 29 H 0.96992 * 119.99688 * 114.08243 * 6 5 3 30 30 H 1.08997 * 109.81140 * 39.13473 * 9 7 6 31 31 H 1.09003 * 109.62058 * 299.20410 * 10 9 7 32 32 H 1.08999 * 109.62410 * 59.75951 * 10 9 7 33 33 H 1.08995 * 109.32403 * 289.32599 * 11 10 9 34 34 H 1.08995 * 109.33339 * 169.84239 * 11 10 9 35 35 H 1.08998 * 109.46604 * 59.73339 * 13 12 11 36 36 H 0.96704 * 113.99456 * 179.97438 * 14 13 12 37 37 H 1.48498 * 110.00343 * 298.68915 * 15 13 12 38 38 H 1.48507 * 109.99638 * 60.00191 * 15 13 12 39 39 H 1.07997 * 119.07304 * 180.40291 * 16 12 11 40 40 H 0.96999 * 120.55722 * 166.72722 * 17 16 12 41 41 H 1.09003 * 113.61075 * 334.48308 * 18 5 3 42 42 H 1.08996 * 113.61627 * 105.29921 * 18 5 3 43 43 H 0.96701 * 114.00056 * 180.02562 * 20 19 18 44 44 H 1.08995 * 113.61965 * 254.54021 * 25 5 3 45 45 H 1.09004 * 113.61398 * 25.44577 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2749 0.0006 6 7 4.1916 0.2078 0.7857 7 6 4.0160 0.1624 2.1212 8 8 3.4170 1.0536 2.6848 9 6 4.5642 -0.9960 2.9143 10 6 3.6010 -2.1888 2.8295 11 6 4.1921 -3.3499 3.6326 12 6 4.6077 -2.8815 4.9979 13 6 4.7851 -3.9068 6.0880 14 8 3.5495 -4.5914 6.3037 15 14 5.3070 -3.0566 7.6613 16 6 4.8282 -1.6206 5.2818 17 7 4.6834 -0.6187 4.3303 18 6 4.1096 2.6768 0.3239 19 6 5.1720 2.4291 -0.7599 20 8 6.3575 1.8019 -0.2666 21 6 5.4652 3.6581 -1.6229 22 9 5.9314 4.6976 -0.8111 23 9 6.4382 3.3374 -2.5756 24 9 4.2935 4.0625 -2.2716 25 6 4.1766 1.4475 -1.4003 26 1 -0.3633 -1.0276 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 4.7320 -0.4660 0.3444 30 1 5.5411 -1.2814 2.5242 31 1 2.6341 -1.9089 3.2478 32 1 3.4797 -2.4882 1.7885 33 1 5.0609 -3.7464 3.1072 34 1 3.4444 -4.1366 3.7332 35 1 5.5507 -4.6237 5.7913 36 1 3.5899 -5.2679 6.9934 37 1 6.6067 -2.3673 7.4592 38 1 4.2715 -2.0764 8.0764 39 1 5.1312 -1.3534 6.2833 40 1 4.6616 0.3140 4.5958 41 1 3.4156 3.4811 0.0794 42 1 4.5215 2.7643 1.3293 43 1 7.0297 1.6438 -0.9436 44 1 4.6440 0.5422 -1.7876 45 1 3.5010 1.9157 -2.1163 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18364788_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:19:52 Heat of formation + Delta-G solvation = -277.478537 kcal Electronic energy + Delta-G solvation = -37972.520824 eV Core-core repulsion = 32351.150129 eV Total energy + Delta-G solvation = -5621.370695 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.132 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -51.34899 -48.89639 -48.79009 -42.81869 -41.14319 -40.52916 -39.28626 -37.64315 -37.37349 -36.71974 -34.60598 -33.31002 -32.98999 -29.92810 -28.65995 -27.75100 -27.52934 -25.67389 -25.32746 -23.75968 -22.66438 -22.21449 -20.92017 -20.35705 -19.69802 -19.61563 -19.37028 -19.16409 -18.81520 -18.20423 -18.08169 -17.71218 -17.44149 -17.32312 -16.56947 -16.46749 -16.07513 -15.77227 -15.65687 -15.53327 -15.29377 -15.24470 -15.19997 -15.01374 -14.95858 -14.92032 -14.71231 -14.53847 -14.46732 -14.32355 -14.09414 -13.91250 -13.67981 -13.62486 -13.31491 -13.25756 -13.06374 -12.90515 -12.47336 -12.33921 -11.99307 -11.92572 -11.86783 -11.72609 -11.59281 -11.34431 -10.93818 -10.51751 -10.13521 -8.48287 -4.91464 0.84224 1.11653 1.24248 1.30305 1.41065 1.48155 1.62541 1.67768 2.01756 2.05917 2.25048 2.35931 2.48259 2.55395 2.80175 3.10629 3.23715 3.29761 3.55930 3.60940 3.65250 3.88210 3.89649 3.95674 3.99476 4.06429 4.10031 4.16866 4.19786 4.29661 4.33364 4.50266 4.53877 4.55879 4.60323 4.72045 4.93567 5.01257 5.15525 5.22225 5.25432 5.52442 5.82859 6.01290 6.25595 6.53800 6.71547 6.79224 6.86611 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.350 6.350 3 C 0.472 3.528 4 O -0.486 6.486 5 C 0.172 3.828 6 N -0.691 5.691 7 C 0.521 3.479 8 O -0.519 6.519 9 C 0.142 3.858 10 C -0.125 4.125 11 C -0.053 4.053 12 C -0.230 4.230 13 C -0.044 4.044 14 O -0.549 6.549 15 Si 0.664 3.336 16 C 0.132 3.868 17 N -0.732 5.732 18 C -0.101 4.101 19 C 0.067 3.933 20 O -0.502 6.502 21 C 0.439 3.561 22 F -0.169 7.169 23 F -0.179 7.179 24 F -0.170 7.170 25 C -0.143 4.143 26 H 0.105 0.895 27 H 0.065 0.935 28 H 0.066 0.934 29 H 0.414 0.586 30 H 0.094 0.906 31 H 0.077 0.923 32 H 0.083 0.917 33 H 0.066 0.934 34 H 0.084 0.916 35 H 0.063 0.937 36 H 0.377 0.623 37 H -0.258 1.258 38 H -0.253 1.253 39 H 0.123 0.877 40 H 0.409 0.591 41 H 0.133 0.867 42 H 0.115 0.885 43 H 0.394 0.606 44 H 0.115 0.885 45 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.131 -7.073 -1.914 7.969 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.265 6.265 3 C 0.311 3.689 4 O -0.371 6.371 5 C 0.082 3.918 6 N -0.346 5.346 7 C 0.307 3.693 8 O -0.393 6.393 9 C 0.033 3.967 10 C -0.164 4.164 11 C -0.090 4.090 12 C -0.240 4.240 13 C -0.157 4.157 14 O -0.354 6.354 15 Si 0.567 3.433 16 C 0.013 3.987 17 N -0.366 5.366 18 C -0.138 4.138 19 C 0.023 3.977 20 O -0.309 6.309 21 C 0.384 3.616 22 F -0.151 7.151 23 F -0.160 7.160 24 F -0.152 7.152 25 C -0.181 4.181 26 H 0.124 0.876 27 H 0.084 0.916 28 H 0.085 0.915 29 H 0.251 0.749 30 H 0.111 0.889 31 H 0.095 0.905 32 H 0.101 0.899 33 H 0.085 0.915 34 H 0.102 0.898 35 H 0.081 0.919 36 H 0.224 0.776 37 H -0.183 1.183 38 H -0.178 1.178 39 H 0.140 0.860 40 H 0.246 0.754 41 H 0.151 0.849 42 H 0.133 0.867 43 H 0.244 0.756 44 H 0.134 0.866 45 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 2.134 -4.954 -1.166 5.518 hybrid contribution 0.475 0.354 -1.333 1.459 sum 2.609 -4.600 -2.499 5.849 Atomic orbital electron populations 1.23380 0.75482 1.04217 1.02923 1.86494 1.23993 1.32575 1.83488 1.23305 0.90706 0.82087 0.72758 1.90720 1.65928 1.36342 1.44104 1.20661 0.85792 0.90859 0.94461 1.45345 1.53128 1.29392 1.06751 1.20698 0.79389 0.87261 0.81925 1.90777 1.40513 1.38302 1.69692 1.20953 1.00050 0.92656 0.83079 1.21874 0.98764 0.94117 1.01611 1.19960 1.00520 0.97066 0.91436 1.20055 1.14259 0.92504 0.97149 1.24351 0.89514 0.97899 1.03894 1.86487 1.32287 1.55414 1.61231 0.95514 0.79509 0.84622 0.83666 1.20113 0.97774 0.88719 0.92137 1.44170 1.81626 1.07813 1.02976 1.23475 0.93960 0.95695 1.00712 1.23316 0.88456 0.89677 0.96289 1.86687 1.26186 1.79598 1.38452 1.20947 0.74753 0.86302 0.79614 1.93252 1.88692 1.60723 1.72397 1.93204 1.63935 1.92571 1.66337 1.93225 1.47905 1.91609 1.82420 1.24042 0.97884 1.01464 0.94697 0.87623 0.91592 0.91513 0.74878 0.88877 0.90451 0.89880 0.91530 0.89776 0.91870 0.77595 1.18336 1.17802 0.85997 0.75405 0.84944 0.86683 0.75572 0.86640 0.85345 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.35 -0.49 10.42 -39.28 -0.41 -0.90 16 3 C 0.47 1.12 6.59 36.00 0.24 1.36 16 4 O -0.49 -2.48 15.66 -18.75 -0.29 -2.78 16 5 C 0.17 -0.08 1.00 -132.16 -0.13 -0.21 16 6 N -0.69 1.23 4.53 -47.92 -0.22 1.01 16 7 C 0.52 0.49 6.63 -10.98 -0.07 0.42 16 8 O -0.52 -2.49 14.64 5.56 0.08 -2.41 16 9 C 0.14 -0.02 3.36 -68.51 -0.23 -0.25 16 10 C -0.12 0.02 5.48 -26.42 -0.14 -0.12 16 11 C -0.05 -0.02 5.83 -28.10 -0.16 -0.18 16 12 C -0.23 -0.41 5.48 -101.34 -0.56 -0.97 16 13 C -0.04 -0.01 2.82 36.01 0.10 0.09 16 14 O -0.55 -0.32 12.53 -35.23 -0.44 -0.76 16 15 Si 0.66 -0.37 29.68 -169.99 -5.04 -5.41 16 16 C 0.13 0.30 9.63 -16.08 -0.15 0.14 16 17 N -0.73 -1.26 5.46 -55.34 -0.30 -1.56 16 18 C -0.10 -0.05 5.98 -25.92 -0.15 -0.20 16 19 C 0.07 -0.13 1.36 -89.80 -0.12 -0.25 16 20 O -0.50 1.53 12.91 -35.23 -0.45 1.08 16 21 C 0.44 -0.16 2.85 37.16 0.11 -0.05 16 22 F -0.17 -0.28 17.18 2.25 0.04 -0.24 16 23 F -0.18 0.13 16.65 2.25 0.04 0.17 16 24 F -0.17 -0.09 15.76 2.25 0.04 -0.06 16 25 C -0.14 0.47 6.63 -25.92 -0.17 0.30 16 26 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 27 H 0.07 0.05 8.13 -51.93 -0.42 -0.37 16 28 H 0.07 -0.04 8.13 -51.93 -0.42 -0.47 16 29 H 0.41 -2.02 8.66 -40.82 -0.35 -2.37 16 30 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 31 H 0.08 0.17 8.14 -51.93 -0.42 -0.25 16 32 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 33 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 34 H 0.08 0.10 7.84 -51.93 -0.41 -0.31 16 35 H 0.06 -0.08 7.96 -51.93 -0.41 -0.49 16 36 H 0.38 -1.59 8.74 45.56 0.40 -1.19 16 37 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 38 H -0.25 -0.75 7.11 56.52 0.40 -0.35 16 39 H 0.12 0.25 4.37 -52.49 -0.23 0.03 16 40 H 0.41 0.81 8.12 -40.82 -0.33 0.48 16 41 H 0.13 0.15 7.09 -51.93 -0.37 -0.21 16 42 H 0.11 0.23 7.19 -51.93 -0.37 -0.15 16 43 H 0.39 -2.53 8.42 45.56 0.38 -2.15 16 44 H 0.12 -0.71 8.09 -51.93 -0.42 -1.13 16 45 H 0.13 -0.41 7.10 -51.93 -0.37 -0.78 16 LS Contribution 384.38 15.07 5.79 5.79 Total: 0.00 -10.91 384.38 -6.21 -17.12 By element: Atomic # 1 Polarization: -7.54 SS G_CDS: -4.64 Total: -12.18 kcal Atomic # 6 Polarization: 1.52 SS G_CDS: -0.39 Total: 1.13 kcal Atomic # 7 Polarization: -0.03 SS G_CDS: -0.52 Total: -0.55 kcal Atomic # 8 Polarization: -4.25 SS G_CDS: -1.52 Total: -5.77 kcal Atomic # 9 Polarization: -0.24 SS G_CDS: 0.11 Total: -0.12 kcal Atomic # 14 Polarization: -0.37 SS G_CDS: -5.04 Total: -5.41 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -10.91 -6.21 -17.12 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -260.363 kcal (2) G-P(sol) polarization free energy of solvation -10.908 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -271.272 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.207 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.115 kcal (6) G-S(sol) free energy of system = (1) + (5) -277.479 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds