Wall clock time and date at job start Tue Mar 9 2021 14:19:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34237 * 116.99648 * 2 1 4 4 O 1.20822 * 120.00051 * 0.02562 * 3 2 1 5 5 C 1.50698 * 119.99564 * 179.97438 * 3 2 1 6 6 N 1.46504 * 112.85176 * 324.46444 * 5 3 2 7 7 C 1.34778 * 119.99662 * 294.08149 * 6 5 3 8 8 O 1.21278 * 120.00400 * 355.00567 * 7 6 5 9 9 C 1.50707 * 119.99557 * 175.00569 * 7 6 5 10 10 C 1.53546 * 109.87115 * 278.24023 * 9 7 6 11 11 C 1.53052 * 108.54954 * 179.47179 * 10 9 7 12 12 C 1.50204 * 110.31658 * 49.57882 * 11 10 9 13 13 C 1.50703 * 118.54914 * 160.23310 * 12 11 10 14 14 O 1.42901 * 109.46881 * 299.73786 * 13 12 11 15 15 Si 1.86297 * 109.47394 * 179.73105 * 13 12 11 16 16 C 1.31121 * 122.90493 * 339.95666 * 12 11 10 17 17 N 1.38920 * 121.85041 * 0.37944 * 16 12 11 18 18 C 1.53783 * 113.61366 * 193.26960 * 5 3 2 19 19 C 1.53778 * 87.07989 * 219.93450 * 18 5 3 20 20 O 1.42900 * 113.61457 * 270.88157 * 19 18 5 21 21 C 1.53009 * 113.61151 * 140.06605 * 19 18 5 22 22 F 1.39894 * 109.47357 * 59.99805 * 21 19 18 23 23 F 1.39897 * 109.46698 * 180.02562 * 21 19 18 24 24 F 1.39902 * 109.46670 * 299.99754 * 21 19 18 25 25 C 1.53778 * 113.69200 * 95.73283 * 5 3 2 26 26 H 1.08997 * 109.46936 * 179.97438 * 1 2 3 27 27 H 1.09000 * 109.46976 * 300.00102 * 1 2 3 28 28 H 1.09000 * 109.46934 * 60.00099 * 1 2 3 29 29 H 0.96992 * 119.99688 * 114.08243 * 6 5 3 30 30 H 1.08997 * 109.81140 * 39.13473 * 9 7 6 31 31 H 1.09003 * 109.62058 * 299.20410 * 10 9 7 32 32 H 1.08999 * 109.62410 * 59.75951 * 10 9 7 33 33 H 1.08995 * 109.32403 * 289.32599 * 11 10 9 34 34 H 1.08995 * 109.33339 * 169.84239 * 11 10 9 35 35 H 1.08998 * 109.46604 * 59.73339 * 13 12 11 36 36 H 0.96704 * 113.99456 * 179.97438 * 14 13 12 37 37 H 1.48498 * 110.00343 * 298.68915 * 15 13 12 38 38 H 1.48507 * 109.99638 * 60.00191 * 15 13 12 39 39 H 1.07997 * 119.07304 * 180.40291 * 16 12 11 40 40 H 0.96999 * 120.55722 * 166.72722 * 17 16 12 41 41 H 1.09003 * 113.61075 * 334.48308 * 18 5 3 42 42 H 1.08996 * 113.61627 * 105.29921 * 18 5 3 43 43 H 0.96701 * 114.00056 * 180.02562 * 20 19 18 44 44 H 1.08995 * 113.61965 * 254.54021 * 25 5 3 45 45 H 1.09004 * 113.61398 * 25.44577 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2749 0.0006 6 7 4.1916 0.2078 0.7857 7 6 4.0160 0.1624 2.1212 8 8 3.4170 1.0536 2.6848 9 6 4.5642 -0.9960 2.9143 10 6 3.6010 -2.1888 2.8295 11 6 4.1921 -3.3499 3.6326 12 6 4.6077 -2.8815 4.9979 13 6 4.7851 -3.9068 6.0880 14 8 3.5495 -4.5914 6.3037 15 14 5.3070 -3.0566 7.6613 16 6 4.8282 -1.6206 5.2818 17 7 4.6834 -0.6187 4.3303 18 6 4.1096 2.6768 0.3239 19 6 5.1720 2.4291 -0.7599 20 8 6.3575 1.8019 -0.2666 21 6 5.4652 3.6581 -1.6229 22 9 5.9314 4.6976 -0.8111 23 9 6.4382 3.3374 -2.5756 24 9 4.2935 4.0625 -2.2716 25 6 4.1766 1.4475 -1.4003 26 1 -0.3633 -1.0276 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 4.7320 -0.4660 0.3444 30 1 5.5411 -1.2814 2.5242 31 1 2.6341 -1.9089 3.2478 32 1 3.4797 -2.4882 1.7885 33 1 5.0609 -3.7464 3.1072 34 1 3.4444 -4.1366 3.7332 35 1 5.5507 -4.6237 5.7913 36 1 3.5899 -5.2679 6.9934 37 1 6.6067 -2.3673 7.4592 38 1 4.2715 -2.0764 8.0764 39 1 5.1312 -1.3534 6.2833 40 1 4.6616 0.3140 4.5958 41 1 3.4156 3.4811 0.0794 42 1 4.5215 2.7643 1.3293 43 1 7.0297 1.6438 -0.9436 44 1 4.6440 0.5422 -1.7876 45 1 3.5010 1.9157 -2.1163 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18364788_15413834.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:19:51 Heat of formation + Delta-G solvation = -284.187081 kcal Electronic energy + Delta-G solvation = -37972.811728 eV Core-core repulsion = 32351.150129 eV Total energy + Delta-G solvation = -5621.661600 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.132 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -51.34496 -48.87325 -48.82720 -42.83672 -41.24449 -40.53204 -39.34172 -37.77152 -37.37304 -36.65078 -34.60208 -33.35236 -33.00151 -29.93328 -28.65146 -27.63510 -27.53651 -25.69197 -25.37625 -23.77677 -22.68666 -22.18814 -20.92935 -20.30713 -19.71476 -19.60634 -19.39359 -19.19053 -18.87185 -18.22831 -18.11670 -17.75082 -17.45328 -17.35230 -16.58745 -16.38659 -16.11780 -15.80254 -15.67193 -15.54675 -15.32087 -15.25156 -15.18914 -15.01105 -14.97579 -14.89123 -14.74910 -14.55477 -14.49963 -14.30738 -14.12397 -13.86069 -13.69492 -13.67104 -13.32211 -13.26067 -13.12700 -12.80478 -12.53381 -12.40064 -12.12546 -11.98327 -11.91776 -11.62650 -11.58606 -11.39576 -11.02518 -10.54852 -10.12604 -8.56027 -4.91662 0.72071 1.08213 1.18611 1.28966 1.40813 1.48920 1.61865 1.63821 1.99351 2.18459 2.39630 2.41108 2.46582 2.61937 2.86270 3.15709 3.29472 3.31628 3.54742 3.60604 3.67850 3.91071 3.99139 4.03445 4.14687 4.17089 4.18211 4.18620 4.27758 4.37853 4.42844 4.51270 4.55247 4.58818 4.59411 4.74882 4.97747 5.01585 5.11738 5.14501 5.22281 5.49160 6.06400 6.24794 6.26385 6.40835 6.60720 6.88153 7.04265 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.349 6.349 3 C 0.467 3.533 4 O -0.523 6.523 5 C 0.169 3.831 6 N -0.670 5.670 7 C 0.521 3.479 8 O -0.564 6.564 9 C 0.144 3.856 10 C -0.120 4.120 11 C -0.051 4.051 12 C -0.240 4.240 13 C -0.049 4.049 14 O -0.567 6.567 15 Si 0.749 3.251 16 C 0.114 3.886 17 N -0.742 5.742 18 C -0.113 4.113 19 C 0.084 3.916 20 O -0.504 6.504 21 C 0.436 3.564 22 F -0.185 7.185 23 F -0.174 7.174 24 F -0.177 7.177 25 C -0.126 4.126 26 H 0.134 0.866 27 H 0.049 0.951 28 H 0.070 0.930 29 H 0.433 0.567 30 H 0.123 0.877 31 H 0.047 0.953 32 H 0.111 0.889 33 H 0.089 0.911 34 H 0.077 0.923 35 H 0.086 0.914 36 H 0.398 0.602 37 H -0.290 1.290 38 H -0.309 1.309 39 H 0.113 0.887 40 H 0.403 0.597 41 H 0.118 0.882 42 H 0.094 0.906 43 H 0.411 0.589 44 H 0.157 0.843 45 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.436 -9.597 -3.589 11.165 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.264 6.264 3 C 0.309 3.691 4 O -0.411 6.411 5 C 0.079 3.921 6 N -0.327 5.327 7 C 0.308 3.692 8 O -0.441 6.441 9 C 0.036 3.964 10 C -0.158 4.158 11 C -0.088 4.088 12 C -0.250 4.250 13 C -0.161 4.161 14 O -0.376 6.376 15 Si 0.658 3.342 16 C -0.006 4.006 17 N -0.375 5.375 18 C -0.151 4.151 19 C 0.040 3.960 20 O -0.314 6.314 21 C 0.382 3.618 22 F -0.166 7.166 23 F -0.155 7.155 24 F -0.159 7.159 25 C -0.164 4.164 26 H 0.152 0.848 27 H 0.068 0.932 28 H 0.089 0.911 29 H 0.274 0.726 30 H 0.140 0.860 31 H 0.066 0.934 32 H 0.129 0.871 33 H 0.107 0.893 34 H 0.096 0.904 35 H 0.104 0.896 36 H 0.248 0.752 37 H -0.218 1.218 38 H -0.238 1.238 39 H 0.130 0.870 40 H 0.239 0.761 41 H 0.136 0.864 42 H 0.113 0.887 43 H 0.265 0.735 44 H 0.174 0.826 45 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 3.481 -7.566 -2.878 8.811 hybrid contribution 0.027 1.189 -0.763 1.413 sum 3.508 -6.377 -3.641 8.138 Atomic orbital electron populations 1.23572 0.74790 1.05899 1.02329 1.86490 1.24781 1.32055 1.83079 1.23894 0.91808 0.81798 0.71599 1.90700 1.66963 1.37485 1.45909 1.20687 0.84340 0.90552 0.96513 1.45159 1.52402 1.29264 1.05835 1.20962 0.78658 0.86937 0.82640 1.90768 1.42607 1.40024 1.70748 1.21128 1.01288 0.91998 0.81992 1.21850 0.97129 0.93885 1.02970 1.20000 1.01144 0.96858 0.90834 1.20481 1.13280 0.92662 0.98564 1.24426 0.90009 0.98245 1.03402 1.86435 1.32519 1.56274 1.62397 0.94717 0.75293 0.82417 0.81823 1.20159 0.99061 0.89266 0.92139 1.44275 1.81854 1.07471 1.03865 1.23426 0.95013 0.96180 1.00493 1.23038 0.88753 0.89379 0.94875 1.86669 1.26242 1.79087 1.39420 1.21206 0.74527 0.86399 0.79707 1.93220 1.88880 1.61654 1.72889 1.93210 1.63699 1.92452 1.66164 1.93211 1.48330 1.91763 1.82574 1.24095 0.96874 1.02582 0.92823 0.84791 0.93235 0.91130 0.72610 0.86012 0.93402 0.87086 0.89279 0.90438 0.89591 0.75203 1.21760 1.23755 0.86994 0.76098 0.86422 0.88718 0.73523 0.82560 0.85201 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 113.37 1.20 1.20 16 2 O -0.35 -0.99 10.42 -51.48 -0.54 -1.52 16 3 C 0.47 2.62 6.59 71.24 0.47 3.09 16 4 O -0.52 -6.45 15.66 21.98 0.34 -6.11 16 5 C 0.17 -0.16 1.00 3.38 0.00 -0.16 16 6 N -0.67 3.02 4.53 -423.91 -1.92 1.10 16 7 C 0.52 1.16 6.63 87.66 0.58 1.74 16 8 O -0.56 -6.60 14.64 -3.02 -0.04 -6.65 16 9 C 0.14 -0.10 3.36 44.33 0.15 0.05 16 10 C -0.12 0.14 5.48 30.80 0.17 0.31 16 11 C -0.05 0.02 5.83 29.71 0.17 0.20 16 12 C -0.24 -0.84 5.48 -16.76 -0.09 -0.93 16 13 C -0.05 0.01 2.82 71.24 0.20 0.22 16 14 O -0.57 -0.26 12.53 -148.98 -1.87 -2.12 16 15 Si 0.75 -0.26 29.68 68.60 2.04 1.77 16 16 C 0.11 0.64 9.63 83.41 0.80 1.45 16 17 N -0.74 -3.48 5.46 -328.99 -1.80 -5.28 16 18 C -0.11 -0.26 5.98 31.12 0.19 -0.08 16 19 C 0.08 -0.36 1.36 -10.27 -0.01 -0.38 16 20 O -0.50 3.86 12.91 -148.98 -1.92 1.93 16 21 C 0.44 -0.33 2.85 71.99 0.21 -0.12 16 22 F -0.19 -0.78 17.18 44.97 0.77 0.00 16 23 F -0.17 0.44 16.65 44.97 0.75 1.19 16 24 F -0.18 -0.27 15.76 44.97 0.71 0.43 16 25 C -0.13 1.03 6.63 31.12 0.21 1.24 16 26 H 0.13 -0.83 8.14 -2.39 -0.02 -0.85 16 27 H 0.05 0.17 8.13 -2.39 -0.02 0.15 16 28 H 0.07 -0.05 8.13 -2.39 -0.02 -0.07 16 29 H 0.43 -5.41 8.66 -92.71 -0.80 -6.21 16 30 H 0.12 -0.78 8.14 -2.39 -0.02 -0.80 16 31 H 0.05 0.25 8.14 -2.39 -0.02 0.23 16 32 H 0.11 -0.78 8.14 -2.39 -0.02 -0.80 16 33 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 34 H 0.08 0.10 7.84 -2.39 -0.02 0.08 16 35 H 0.09 -0.39 7.96 -2.39 -0.02 -0.41 16 36 H 0.40 -3.82 8.74 -74.05 -0.65 -4.47 16 37 H -0.29 -1.36 7.11 99.48 0.71 -0.66 16 38 H -0.31 -2.70 7.11 99.48 0.71 -1.99 16 39 H 0.11 0.72 4.37 -2.91 -0.01 0.71 16 40 H 0.40 2.56 8.12 -92.71 -0.75 1.80 16 41 H 0.12 0.59 7.09 -2.39 -0.02 0.58 16 42 H 0.09 0.61 7.19 -2.39 -0.02 0.59 16 43 H 0.41 -6.28 8.42 -74.06 -0.62 -6.91 16 44 H 0.16 -2.55 8.09 -2.39 -0.02 -2.56 16 45 H 0.13 -0.99 7.10 -2.38 -0.02 -1.00 16 Total: 0.00 -29.54 384.38 -0.91 -30.45 By element: Atomic # 1 Polarization: -21.35 SS G_CDS: -1.67 Total: -23.02 kcal Atomic # 6 Polarization: 3.57 SS G_CDS: 4.24 Total: 7.81 kcal Atomic # 7 Polarization: -0.46 SS G_CDS: -3.72 Total: -4.17 kcal Atomic # 8 Polarization: -10.44 SS G_CDS: -4.03 Total: -14.47 kcal Atomic # 9 Polarization: -0.61 SS G_CDS: 2.23 Total: 1.62 kcal Atomic # 14 Polarization: -0.26 SS G_CDS: 2.04 Total: 1.77 kcal Total: -29.54 -0.91 -30.45 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_15413834.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -253.735 kcal (2) G-P(sol) polarization free energy of solvation -29.542 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -283.277 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.910 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.452 kcal (6) G-S(sol) free energy of system = (1) + (5) -284.187 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds