Wall clock time and date at job start Tue Mar 9 2021 14:19:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34229 * 116.99913 * 2 1 4 4 O 1.20829 * 119.99820 * 0.02562 * 3 2 1 5 5 C 1.50696 * 119.99875 * 180.02562 * 3 2 1 6 6 N 1.46495 * 112.85016 * 23.79984 * 5 3 2 7 7 C 1.34778 * 120.00451 * 309.66835 * 6 5 3 8 8 O 1.21277 * 119.99467 * 354.48304 * 7 6 5 9 9 C 1.50698 * 120.00386 * 174.47599 * 7 6 5 10 10 C 1.53038 * 109.33349 * 217.27456 * 9 7 6 11 11 C 1.53528 * 108.57344 * 190.18468 * 10 9 7 12 12 N 1.47038 * 107.64992 * 60.95302 * 11 10 9 13 13 C 1.38926 * 118.87808 * 316.31310 * 12 11 10 14 14 C 1.31112 * 121.85162 * 13.34227 * 13 12 11 15 15 C 1.50696 * 118.54427 * 179.56980 * 14 13 12 16 16 O 1.42896 * 109.47131 * 105.95189 * 15 14 13 17 17 Si 1.86299 * 109.47424 * 345.94941 * 15 14 13 18 18 C 1.53781 * 113.61134 * 252.49752 * 5 3 2 19 19 C 1.53784 * 87.07884 * 220.01753 * 18 5 3 20 20 O 1.42904 * 113.61408 * 270.88368 * 19 18 5 21 21 C 1.52998 * 113.61274 * 139.98112 * 19 18 5 22 22 F 1.39898 * 109.47299 * 322.50130 * 21 19 18 23 23 F 1.39904 * 109.47004 * 82.50509 * 21 19 18 24 24 F 1.39901 * 109.47368 * 202.50249 * 21 19 18 25 25 C 1.53777 * 113.61275 * 154.99985 * 5 3 2 26 26 H 1.09007 * 109.47333 * 299.99933 * 1 2 3 27 27 H 1.08996 * 109.47315 * 59.99949 * 1 2 3 28 28 H 1.08994 * 109.47258 * 180.02562 * 1 2 3 29 29 H 0.97008 * 120.00172 * 129.66707 * 6 5 3 30 30 H 1.08999 * 109.32488 * 336.76106 * 9 7 6 31 31 H 1.09001 * 109.61841 * 309.89757 * 10 9 7 32 32 H 1.09006 * 109.62221 * 70.44491 * 10 9 7 33 33 H 1.08994 * 109.84307 * 301.40234 * 11 10 9 34 34 H 1.09006 * 109.86402 * 180.50536 * 11 10 9 35 35 H 0.96998 * 120.55867 * 136.33790 * 12 11 10 36 36 H 1.08001 * 119.06807 * 193.31809 * 13 12 11 37 37 H 1.09002 * 109.46665 * 225.95005 * 15 14 13 38 38 H 0.96704 * 114.00563 * 65.81860 * 16 15 14 39 39 H 1.48495 * 109.99761 * 178.68242 * 17 15 14 40 40 H 1.48506 * 109.99613 * 299.99926 * 17 15 14 41 41 H 1.08997 * 113.61469 * 334.56443 * 18 5 3 42 42 H 1.08998 * 113.61572 * 105.47100 * 18 5 3 43 43 H 0.96701 * 113.99839 * 277.49616 * 20 19 18 44 44 H 1.08998 * 113.61267 * 254.52417 * 25 5 3 45 45 H 1.08990 * 113.61792 * 25.34955 * 25 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1988 0.0712 -0.5459 7 6 3.8373 -1.1450 -0.0913 8 8 3.0629 -1.2396 0.8372 9 6 4.3951 -2.3872 -0.7370 10 6 3.3099 -3.4653 -0.7829 11 6 3.9569 -4.7929 -1.2023 12 7 4.9652 -5.1371 -0.1890 13 6 5.8101 -4.1402 0.2826 14 6 5.5772 -2.8704 0.0537 15 6 6.5378 -1.8507 0.6090 16 8 7.3386 -1.3240 -0.4509 17 14 7.6384 -2.6595 1.8759 18 6 4.1598 1.7300 1.3431 19 6 5.1636 2.5624 0.5281 20 8 6.3545 1.8499 0.1870 21 6 5.4458 3.9415 1.1277 22 9 4.2662 4.4658 1.6670 23 9 6.4076 3.8233 2.1367 24 9 5.9216 4.7964 0.1278 25 6 4.1144 2.5825 -0.5960 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3633 -1.0276 0.0005 29 1 4.8779 0.1495 -1.2342 30 1 4.7119 -2.1541 -1.7535 31 1 2.8595 -3.5734 0.2038 32 1 2.5459 -3.1850 -1.5081 33 1 4.4344 -4.6805 -2.1756 34 1 3.1993 -5.5752 -1.2505 35 1 5.0395 -6.0450 0.1443 36 1 6.6830 -4.4191 0.8541 37 1 5.9777 -1.0415 1.0778 38 1 6.8410 -0.8109 -1.1023 39 1 8.6113 -1.6718 2.4080 40 1 6.8175 -3.2113 2.9836 41 1 3.4760 2.3330 1.9406 42 1 4.6218 0.9232 1.9120 43 1 7.0182 1.8339 0.8901 44 1 4.5398 2.4638 -1.5925 45 1 3.4177 3.4181 -0.5299 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18364788_15608500.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:19:54 Heat of formation + Delta-G solvation = -282.550262 kcal Electronic energy + Delta-G solvation = -39714.963177 eV Core-core repulsion = 34093.372555 eV Total energy + Delta-G solvation = -5621.590622 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.132 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -51.34670 -48.89448 -48.80813 -42.76522 -41.11946 -40.46704 -39.01056 -37.64305 -37.35479 -36.50048 -34.29941 -33.18834 -32.68420 -29.77216 -28.60148 -27.64210 -27.17559 -26.01920 -25.33573 -23.17911 -22.70057 -22.08810 -20.78830 -20.25935 -19.68851 -19.55100 -19.22694 -19.06962 -18.63643 -18.28991 -17.83058 -17.67307 -17.49091 -17.25286 -16.46575 -16.26076 -15.94686 -15.72617 -15.66511 -15.43927 -15.25640 -15.08976 -15.02827 -14.99072 -14.89749 -14.84701 -14.65815 -14.51488 -14.44627 -14.19710 -13.98306 -13.88222 -13.79343 -13.54740 -13.16647 -13.03333 -12.87297 -12.48477 -12.39631 -12.31558 -11.98957 -11.93988 -11.81370 -11.46718 -11.35824 -11.11969 -10.80206 -10.67353 -10.34093 -8.36788 -4.89627 0.78167 1.24675 1.32928 1.46916 1.58973 1.66471 1.74632 1.90420 1.99180 2.18190 2.39912 2.44784 2.62165 2.73282 2.92133 3.19901 3.30333 3.53995 3.67027 3.86773 3.93092 4.04010 4.07793 4.15347 4.17085 4.21126 4.22403 4.28676 4.38144 4.40587 4.45958 4.48563 4.53703 4.60578 4.69466 4.82222 4.88270 5.15115 5.22563 5.26562 5.33075 5.51684 6.11491 6.39292 6.41960 6.50192 6.84590 7.01261 7.22438 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.327 6.327 3 C 0.468 3.532 4 O -0.526 6.526 5 C 0.170 3.830 6 N -0.694 5.694 7 C 0.525 3.475 8 O -0.533 6.533 9 C -0.031 4.031 10 C -0.122 4.122 11 C 0.123 3.877 12 N -0.747 5.747 13 C 0.163 3.837 14 C -0.296 4.296 15 C -0.055 4.055 16 O -0.540 6.540 17 Si 0.791 3.209 18 C -0.151 4.151 19 C 0.085 3.915 20 O -0.497 6.497 21 C 0.436 3.564 22 F -0.179 7.179 23 F -0.182 7.182 24 F -0.176 7.176 25 C -0.096 4.096 26 H 0.055 0.945 27 H 0.066 0.934 28 H 0.119 0.881 29 H 0.423 0.577 30 H 0.108 0.892 31 H 0.058 0.942 32 H 0.084 0.916 33 H 0.072 0.928 34 H 0.097 0.903 35 H 0.413 0.587 36 H 0.147 0.853 37 H 0.053 0.947 38 H 0.367 0.633 39 H -0.298 1.298 40 H -0.287 1.287 41 H 0.111 0.889 42 H 0.103 0.897 43 H 0.405 0.595 44 H 0.138 0.862 45 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.849 -6.485 -5.083 8.445 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.241 6.241 3 C 0.310 3.690 4 O -0.415 6.415 5 C 0.080 3.920 6 N -0.351 5.351 7 C 0.313 3.687 8 O -0.408 6.408 9 C -0.052 4.052 10 C -0.161 4.161 11 C -0.001 4.001 12 N -0.378 5.378 13 C 0.041 3.959 14 C -0.307 4.307 15 C -0.166 4.166 16 O -0.345 6.345 17 Si 0.697 3.303 18 C -0.190 4.190 19 C 0.041 3.959 20 O -0.306 6.306 21 C 0.381 3.619 22 F -0.161 7.161 23 F -0.164 7.164 24 F -0.157 7.157 25 C -0.133 4.133 26 H 0.074 0.926 27 H 0.084 0.916 28 H 0.138 0.862 29 H 0.263 0.737 30 H 0.125 0.875 31 H 0.077 0.923 32 H 0.102 0.898 33 H 0.091 0.909 34 H 0.115 0.885 35 H 0.249 0.751 36 H 0.163 0.837 37 H 0.070 0.930 38 H 0.215 0.785 39 H -0.226 1.226 40 H -0.214 1.214 41 H 0.130 0.870 42 H 0.122 0.878 43 H 0.258 0.742 44 H 0.157 0.843 45 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges 1.388 -6.639 -3.940 7.844 hybrid contribution -0.978 1.687 0.602 2.041 sum 0.410 -4.952 -3.338 5.986 Atomic orbital electron populations 1.23473 0.76094 1.05037 1.02188 1.86871 1.23706 1.31419 1.82115 1.23777 0.91605 0.81923 0.71698 1.90699 1.66843 1.37196 1.46799 1.20610 0.84868 0.88667 0.97827 1.45643 1.43185 1.02778 1.43479 1.20994 0.79967 0.84660 0.83074 1.90728 1.34802 1.86737 1.28510 1.19659 0.94293 0.91650 0.99631 1.21744 0.96736 0.94879 1.02707 1.21670 0.90941 0.96257 0.91281 1.44682 1.36800 1.10705 1.45588 1.20506 0.92530 0.88438 0.94449 1.20409 1.00813 0.94229 1.15228 1.25050 0.97740 0.97052 0.96717 1.86747 1.36845 1.72703 1.38231 0.92562 0.78436 0.84711 0.74633 1.24122 0.97929 1.00718 0.96190 1.23039 0.88647 0.85797 0.98427 1.86552 1.26031 1.72995 1.45043 1.21226 0.74277 0.89739 0.76630 1.93211 1.47790 1.88367 1.86707 1.93200 1.64741 1.96155 1.62292 1.93231 1.88456 1.73377 1.60645 1.23488 0.94294 0.95267 1.00285 0.92624 0.91578 0.86239 0.73736 0.87458 0.92317 0.89771 0.90943 0.88472 0.75145 0.83661 0.92963 0.78454 1.22613 1.21414 0.87038 0.87833 0.74161 0.84345 0.85146 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.07 10.56 113.37 1.20 1.26 16 2 O -0.33 -2.24 6.57 -43.57 -0.29 -2.53 16 3 C 0.47 3.02 7.04 71.23 0.50 3.52 16 4 O -0.53 -5.62 15.81 21.95 0.35 -5.27 16 5 C 0.17 0.00 1.07 3.38 0.00 0.01 16 6 N -0.69 2.39 4.65 -423.95 -1.97 0.42 16 7 C 0.53 0.57 4.39 87.66 0.38 0.96 16 8 O -0.53 -4.77 13.09 20.66 0.27 -4.50 16 9 C -0.03 0.09 2.69 -12.43 -0.03 0.05 16 10 C -0.12 0.33 5.32 30.78 0.16 0.49 16 11 C 0.12 -0.83 7.16 86.45 0.62 -0.22 16 12 N -0.75 4.29 5.83 -345.90 -2.02 2.27 16 13 C 0.16 -0.53 9.60 83.42 0.80 0.27 16 14 C -0.30 0.51 5.03 -16.76 -0.08 0.42 16 15 C -0.06 0.06 2.43 71.23 0.17 0.24 16 16 O -0.54 1.47 12.63 -148.98 -1.88 -0.41 16 17 Si 0.79 -0.14 30.03 68.60 2.06 1.92 16 18 C -0.15 -0.01 6.69 31.12 0.21 0.19 16 19 C 0.09 -0.27 1.36 -10.27 -0.01 -0.28 16 20 O -0.50 3.21 12.79 -148.98 -1.91 1.31 16 21 C 0.44 0.29 2.85 71.98 0.21 0.49 16 22 F -0.18 -0.68 15.76 44.97 0.71 0.03 16 23 F -0.18 -0.28 16.65 44.97 0.75 0.47 16 24 F -0.18 -0.41 17.18 44.97 0.77 0.36 16 25 C -0.10 0.34 6.41 31.12 0.20 0.54 16 26 H 0.05 0.22 8.13 -2.38 -0.02 0.20 16 27 H 0.07 0.09 8.13 -2.39 -0.02 0.07 16 28 H 0.12 -0.20 8.14 -2.39 -0.02 -0.22 16 29 H 0.42 -3.79 7.67 -92.70 -0.71 -4.50 16 30 H 0.11 -0.78 8.12 -2.39 -0.02 -0.80 16 31 H 0.06 0.19 7.51 -2.39 -0.02 0.18 16 32 H 0.08 -0.36 8.14 -2.38 -0.02 -0.38 16 33 H 0.07 -0.59 8.14 -2.39 -0.02 -0.60 16 34 H 0.10 -0.92 8.14 -2.38 -0.02 -0.94 16 35 H 0.41 -3.85 8.96 -92.71 -0.83 -4.68 16 36 H 0.15 -0.96 4.61 -2.91 -0.01 -0.98 16 37 H 0.05 0.04 6.64 -2.39 -0.02 0.02 16 38 H 0.37 -2.94 8.32 -74.05 -0.62 -3.56 16 39 H -0.30 -1.89 7.11 99.48 0.71 -1.18 16 40 H -0.29 -1.42 7.11 99.48 0.71 -0.72 16 41 H 0.11 0.23 7.09 -2.39 -0.02 0.21 16 42 H 0.10 0.08 8.14 -2.39 -0.02 0.06 16 43 H 0.41 -3.84 8.43 -74.06 -0.62 -4.47 16 44 H 0.14 -1.18 8.11 -2.39 -0.02 -1.20 16 45 H 0.13 -0.20 7.13 -2.39 -0.02 -0.21 16 Total: 0.00 -21.23 377.36 -0.45 -21.68 By element: Atomic # 1 Polarization: -22.07 SS G_CDS: -1.62 Total: -23.69 kcal Atomic # 6 Polarization: 3.63 SS G_CDS: 4.33 Total: 7.95 kcal Atomic # 7 Polarization: 6.68 SS G_CDS: -3.99 Total: 2.69 kcal Atomic # 8 Polarization: -7.95 SS G_CDS: -3.46 Total: -11.40 kcal Atomic # 9 Polarization: -1.37 SS G_CDS: 2.23 Total: 0.86 kcal Atomic # 14 Polarization: -0.14 SS G_CDS: 2.06 Total: 1.92 kcal Total: -21.23 -0.45 -21.68 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_15608500.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -260.871 kcal (2) G-P(sol) polarization free energy of solvation -21.225 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -282.097 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.454 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.679 kcal (6) G-S(sol) free energy of system = (1) + (5) -282.550 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds