Wall clock time and date at job start Tue Mar 9 2021 14:19:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34227 * 116.99844 * 2 1 4 4 O 1.20819 * 120.00321 * 359.97438 * 3 2 1 5 5 C 1.50699 * 119.99688 * 179.97438 * 3 2 1 6 6 N 1.46501 * 112.90887 * 24.38177 * 5 3 2 7 7 C 1.34774 * 120.00244 * 65.94993 * 6 5 3 8 8 O 1.21635 * 119.99753 * 5.02000 * 7 6 5 9 9 C 1.47262 * 120.00430 * 185.01885 * 7 6 5 10 10 C 1.36329 * 126.97048 * 179.70889 * 9 7 6 11 11 C 1.51004 * 126.79485 * 0.07819 * 10 9 7 12 12 C 1.53390 * 108.24983 * 164.28254 * 11 10 9 13 13 C 1.53156 * 109.03936 * 48.48657 * 12 11 10 14 14 C 1.53351 * 109.33171 * 290.21396 * 13 12 11 15 15 N 1.35218 * 108.66272 * 179.97438 * 10 9 7 16 16 C 1.36425 * 109.89600 * 0.35333 * 15 10 9 17 17 C 1.50700 * 125.49018 * 179.81711 * 16 15 10 18 18 O 1.42895 * 109.46973 * 29.99462 * 17 16 15 19 19 Si 1.86308 * 109.46566 * 149.98690 * 17 16 15 20 20 C 1.34493 * 109.01263 * 359.79036 * 16 15 10 21 21 C 1.53950 * 113.66893 * 253.19274 * 5 3 2 22 22 C 1.53784 * 87.02253 * 220.06656 * 21 5 3 23 23 O 1.42898 * 113.61342 * 270.77054 * 22 21 5 24 24 C 1.52998 * 113.61801 * 139.94791 * 22 21 5 25 25 F 1.39893 * 109.47331 * 200.86801 * 24 22 21 26 26 F 1.39903 * 109.47083 * 80.86185 * 24 22 21 27 27 F 1.39909 * 109.47035 * 320.87044 * 24 22 21 28 28 C 1.53784 * 113.61569 * 155.63064 * 5 3 2 29 29 H 1.08998 * 109.47458 * 300.00912 * 1 2 3 30 30 H 1.09009 * 109.46589 * 60.00441 * 1 2 3 31 31 H 1.09001 * 109.47246 * 180.02562 * 1 2 3 32 32 H 0.96999 * 120.00171 * 245.95461 * 6 5 3 33 33 H 1.09001 * 109.70780 * 283.97996 * 11 10 9 34 34 H 1.09002 * 109.70195 * 44.55004 * 11 10 9 35 35 H 1.09003 * 109.54084 * 168.34980 * 12 11 10 36 36 H 1.08992 * 109.54230 * 288.52853 * 12 11 10 37 37 H 1.09006 * 109.46428 * 50.44064 * 13 12 11 38 38 H 1.09002 * 109.46023 * 170.41284 * 13 12 11 39 39 H 1.09006 * 110.08246 * 291.23708 * 14 13 12 40 40 H 1.08998 * 109.13024 * 170.85207 * 14 13 12 41 41 H 1.08996 * 109.47365 * 269.98242 * 17 16 15 42 42 H 0.96701 * 113.99694 * 179.97438 * 18 17 16 43 43 H 1.48495 * 110.00219 * 300.00179 * 19 17 16 44 44 H 1.48503 * 109.99713 * 61.32445 * 19 17 16 45 45 H 1.08000 * 126.81855 * 179.97438 * 20 16 15 46 46 H 1.08999 * 113.67105 * 105.53920 * 21 5 3 47 47 H 1.08996 * 113.61345 * 334.58455 * 21 5 3 48 48 H 0.96701 * 113.99808 * 279.13170 * 23 22 21 49 49 H 1.08994 * 113.60980 * 25.43507 * 28 5 3 50 50 H 1.08996 * 113.61458 * 254.53423 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 7 4.2003 0.0771 -0.5560 7 6 4.0406 -0.2260 -1.8595 8 8 3.4475 0.5409 -2.5939 9 6 4.5843 -1.4857 -2.3946 10 6 4.5010 -1.9344 -3.6792 11 6 3.8328 -1.2363 -4.8395 12 6 4.3167 -1.8932 -6.1385 13 6 4.1988 -3.4142 -6.0032 14 6 5.2419 -3.9169 -4.9978 15 7 5.1260 -3.1307 -3.7610 16 6 5.6167 -3.4828 -2.5377 17 6 6.3714 -4.7503 -2.2295 18 8 7.0912 -5.1702 -3.3902 19 14 7.5680 -4.4372 -0.8362 20 6 5.3188 -2.5161 -1.6513 21 6 4.1616 1.7146 1.3505 22 6 5.1636 2.5567 0.5432 23 8 6.3552 1.8494 0.1941 24 6 5.4457 3.9293 1.1574 25 9 5.9545 4.7845 0.1742 26 9 6.3815 3.7952 2.1888 27 9 4.2589 4.4631 1.6712 28 6 4.1146 2.5887 -0.5809 29 1 -0.3634 0.5140 0.8899 30 1 -0.3633 0.5138 -0.8901 31 1 -0.3634 -1.0277 0.0005 32 1 4.7350 -0.4978 0.0136 33 1 2.7508 -1.3389 -4.7565 34 1 4.1030 -0.1803 -4.8380 35 1 3.7010 -1.5523 -6.9708 36 1 5.3567 -1.6215 -6.3190 37 1 3.1983 -3.6714 -5.6551 38 1 4.3768 -3.8799 -6.9726 39 1 6.2445 -3.8038 -5.4105 40 1 5.0513 -4.9679 -4.7808 41 1 5.6681 -5.5297 -1.9361 42 1 7.6015 -5.9819 -3.2642 43 1 8.5322 -3.3763 -1.2235 44 1 6.8291 -4.0304 0.3861 45 1 5.5701 -2.5011 -0.6011 46 1 4.6252 0.9020 1.9099 47 1 3.4784 2.3104 1.9556 48 1 7.0093 1.8059 0.9050 49 1 3.4184 3.4239 -0.5047 50 1 4.5401 2.4806 -1.5785 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18364788_16915396.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:19:59 Heat of formation + Delta-G solvation = -261.929255 kcal Electronic energy + Delta-G solvation = -44125.739404 eV Core-core repulsion = 38093.053076 eV Total energy + Delta-G solvation = -6032.686328 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 419.148 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -51.22695 -48.77400 -48.66870 -42.83163 -42.42004 -40.54648 -39.48130 -37.99471 -37.48297 -36.90850 -36.49670 -34.12346 -33.45717 -31.27622 -30.06299 -29.11288 -28.45675 -27.59101 -26.66128 -25.55062 -24.56650 -24.03719 -22.45515 -21.66967 -21.50131 -20.57875 -20.18488 -19.68836 -19.48552 -19.38853 -18.66631 -18.57272 -18.22388 -17.89921 -17.35409 -17.17817 -16.84179 -16.46254 -16.34622 -15.94532 -15.76794 -15.57026 -15.52564 -15.48026 -15.27848 -15.14023 -15.12751 -14.96594 -14.91775 -14.85792 -14.81548 -14.56957 -14.47476 -14.30363 -14.24316 -13.97768 -13.85169 -13.72462 -13.44996 -13.22866 -13.08537 -12.90168 -12.74799 -12.48261 -12.25020 -12.10472 -12.05534 -11.85617 -11.82422 -11.76958 -11.71798 -11.53919 -10.77431 -10.68108 -10.19235 -9.58189 -9.00062 -5.08939 0.80576 0.95944 1.03686 1.32452 1.37201 1.60023 1.70255 1.76071 1.97114 2.11182 2.22443 2.39678 2.49162 2.64260 2.70106 3.02805 3.05241 3.27825 3.37625 3.47817 3.55354 3.68904 3.70937 3.77664 3.80940 4.00566 4.13503 4.16162 4.20699 4.22493 4.27035 4.30510 4.30700 4.33136 4.42233 4.49399 4.54173 4.63711 4.68184 4.73300 4.75560 4.79415 4.89461 5.02497 5.16719 5.18116 5.30261 5.37859 5.70880 5.98458 6.07079 6.21138 6.39190 6.53852 6.71118 7.36284 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.346 6.346 3 C 0.476 3.524 4 O -0.493 6.493 5 C 0.174 3.826 6 N -0.695 5.695 7 C 0.607 3.393 8 O -0.539 6.539 9 C -0.230 4.230 10 C 0.125 3.875 11 C -0.056 4.056 12 C -0.129 4.129 13 C -0.140 4.140 14 C 0.114 3.886 15 N -0.421 5.421 16 C 0.038 3.962 17 C -0.048 4.048 18 O -0.552 6.552 19 Si 0.707 3.293 20 C -0.174 4.174 21 C -0.144 4.144 22 C 0.067 3.933 23 O -0.500 6.500 24 C 0.438 3.562 25 F -0.170 7.170 26 F -0.180 7.180 27 F -0.170 7.170 28 C -0.100 4.100 29 H 0.065 0.935 30 H 0.065 0.935 31 H 0.103 0.897 32 H 0.409 0.591 33 H 0.089 0.911 34 H 0.101 0.899 35 H 0.080 0.920 36 H 0.069 0.931 37 H 0.074 0.926 38 H 0.089 0.911 39 H 0.090 0.910 40 H 0.092 0.908 41 H 0.077 0.923 42 H 0.387 0.613 43 H -0.252 1.252 44 H -0.254 1.254 45 H 0.145 0.855 46 H 0.112 0.888 47 H 0.128 0.872 48 H 0.391 0.609 49 H 0.131 0.869 50 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.717 -9.533 1.268 9.994 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.262 6.262 3 C 0.316 3.684 4 O -0.379 6.379 5 C 0.085 3.915 6 N -0.349 5.349 7 C 0.398 3.602 8 O -0.417 6.417 9 C -0.239 4.239 10 C 0.006 3.994 11 C -0.094 4.094 12 C -0.167 4.167 13 C -0.178 4.178 14 C -0.006 4.006 15 N -0.097 5.097 16 C -0.071 4.071 17 C -0.158 4.158 18 O -0.359 6.359 19 Si 0.606 3.394 20 C -0.198 4.198 21 C -0.182 4.182 22 C 0.023 3.977 23 O -0.306 6.306 24 C 0.384 3.616 25 F -0.151 7.151 26 F -0.162 7.162 27 F -0.151 7.151 28 C -0.138 4.138 29 H 0.083 0.917 30 H 0.084 0.916 31 H 0.121 0.879 32 H 0.245 0.755 33 H 0.107 0.893 34 H 0.119 0.881 35 H 0.098 0.902 36 H 0.088 0.912 37 H 0.093 0.907 38 H 0.107 0.893 39 H 0.108 0.892 40 H 0.111 0.889 41 H 0.095 0.905 42 H 0.236 0.764 43 H -0.176 1.176 44 H -0.178 1.178 45 H 0.162 0.838 46 H 0.130 0.870 47 H 0.146 0.854 48 H 0.242 0.758 49 H 0.149 0.851 50 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges 1.840 -7.865 0.214 8.081 hybrid contribution -0.030 0.100 0.785 0.792 sum 1.810 -7.765 0.999 8.036 Atomic orbital electron populations 1.23342 0.75844 1.03987 1.02772 1.86526 1.23678 1.32673 1.83325 1.23361 0.90783 0.81947 0.72319 1.90703 1.65999 1.36334 1.44834 1.20618 0.85652 0.88488 0.96787 1.45172 1.53726 1.25279 1.10706 1.17233 0.77839 0.84494 0.80656 1.90788 1.42730 1.50559 1.57652 1.19566 1.13260 0.97599 0.93520 1.20386 0.97103 0.86369 0.95501 1.20535 0.99966 0.99966 0.88886 1.21727 1.02556 0.94467 0.97950 1.22011 0.99324 0.96913 0.99540 1.22123 1.00897 0.95550 0.82050 1.43862 1.41450 1.15951 1.08424 1.19644 1.04130 0.97974 0.85356 1.24443 0.99547 0.94238 0.97556 1.86424 1.66361 1.47874 1.35203 0.95512 0.80340 0.88135 0.75387 1.21587 1.05597 0.94093 0.98535 1.24074 0.98010 1.01134 0.94946 1.23312 0.88369 0.86937 0.99082 1.86733 1.26816 1.74301 1.42796 1.20988 0.74679 0.89169 0.76811 1.93245 1.87263 1.72935 1.61678 1.93199 1.66405 1.95985 1.60590 1.93227 1.46656 1.87803 1.87445 1.23483 0.94114 0.96527 0.99683 0.91666 0.91614 0.87896 0.75454 0.89299 0.88099 0.90154 0.91208 0.90715 0.89272 0.89199 0.88933 0.90471 0.76439 1.17594 1.17849 0.83763 0.86963 0.85368 0.75849 0.85111 0.86498 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 10.56 101.05 1.07 1.10 16 2 O -0.35 -1.19 10.23 -39.25 -0.40 -1.59 16 3 C 0.48 1.91 6.59 36.01 0.24 2.15 16 4 O -0.49 -3.00 15.80 -18.74 -0.30 -3.29 16 5 C 0.17 0.30 1.01 -132.07 -0.13 0.17 16 6 N -0.70 -1.10 4.42 -48.95 -0.22 -1.32 16 7 C 0.61 2.62 7.32 -12.59 -0.09 2.52 16 8 O -0.54 -3.66 13.88 5.25 0.07 -3.59 16 9 C -0.23 -0.88 6.28 -103.48 -0.65 -1.53 16 10 C 0.12 0.41 6.57 -81.64 -0.54 -0.12 16 11 C -0.06 -0.11 5.33 -27.53 -0.15 -0.26 16 12 C -0.13 0.04 5.97 -26.45 -0.16 -0.12 16 13 C -0.14 0.18 5.94 -26.47 -0.16 0.03 16 14 C 0.11 -0.03 5.32 -3.58 -0.02 -0.05 16 15 N -0.42 -0.90 3.11 -107.24 -0.33 -1.24 16 16 C 0.04 0.07 6.18 -81.87 -0.51 -0.43 16 17 C -0.05 0.07 2.98 36.01 0.11 0.18 16 18 O -0.55 1.19 10.65 -35.23 -0.38 0.82 16 19 Si 0.71 -1.71 31.22 -169.99 -5.31 -7.02 16 20 C -0.17 -0.39 9.09 -37.47 -0.34 -0.73 16 21 C -0.14 0.18 6.64 -25.83 -0.17 0.01 16 22 C 0.07 0.00 1.33 -89.80 -0.12 -0.12 16 23 O -0.50 0.36 12.91 -35.23 -0.45 -0.09 16 24 C 0.44 0.45 2.83 37.16 0.11 0.56 16 25 F -0.17 -0.48 17.20 2.25 0.04 -0.44 16 26 F -0.18 -0.10 16.72 2.25 0.04 -0.06 16 27 F -0.17 -0.31 15.74 2.25 0.04 -0.27 16 28 C -0.10 -0.22 6.05 -25.92 -0.16 -0.38 16 29 H 0.06 0.03 8.13 -51.93 -0.42 -0.40 16 30 H 0.07 0.11 8.13 -51.92 -0.42 -0.31 16 31 H 0.10 -0.14 8.14 -51.93 -0.42 -0.56 16 32 H 0.41 -0.26 7.80 -40.82 -0.32 -0.58 16 33 H 0.09 0.18 8.14 -51.93 -0.42 -0.24 16 34 H 0.10 0.32 7.39 -51.93 -0.38 -0.06 16 35 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.07 0.01 8.12 -51.93 -0.42 -0.42 16 37 H 0.07 -0.07 8.11 -51.93 -0.42 -0.49 16 38 H 0.09 -0.25 8.14 -51.93 -0.42 -0.68 16 39 H 0.09 -0.01 8.00 -51.93 -0.42 -0.43 16 40 H 0.09 -0.10 7.69 -51.93 -0.40 -0.50 16 41 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 42 H 0.39 -2.71 8.74 45.56 0.40 -2.32 16 43 H -0.25 -0.42 7.11 56.52 0.40 -0.01 16 44 H -0.25 0.16 6.88 56.52 0.39 0.54 16 45 H 0.14 0.05 6.38 -52.49 -0.33 -0.29 16 46 H 0.11 -0.44 8.09 -51.93 -0.42 -0.86 16 47 H 0.13 -0.18 7.13 -51.93 -0.37 -0.55 16 48 H 0.39 -1.71 8.50 45.56 0.39 -1.32 16 49 H 0.13 0.32 7.07 -51.93 -0.37 -0.04 16 50 H 0.12 0.45 7.20 -51.93 -0.37 0.07 16 LS Contribution 418.90 15.07 6.31 6.31 Total: 0.00 -11.26 418.90 -8.16 -19.42 By element: Atomic # 1 Polarization: -5.01 SS G_CDS: -5.60 Total: -10.61 kcal Atomic # 6 Polarization: 4.66 SS G_CDS: -1.67 Total: 2.98 kcal Atomic # 7 Polarization: -2.01 SS G_CDS: -0.55 Total: -2.56 kcal Atomic # 8 Polarization: -6.29 SS G_CDS: -1.46 Total: -7.75 kcal Atomic # 9 Polarization: -0.89 SS G_CDS: 0.11 Total: -0.78 kcal Atomic # 14 Polarization: -1.71 SS G_CDS: -5.31 Total: -7.02 kcal Total LS contribution 6.31 Total: 6.31 kcal Total: -11.26 -8.16 -19.42 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_16915396.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -242.513 kcal (2) G-P(sol) polarization free energy of solvation -11.257 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -253.770 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.159 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.416 kcal (6) G-S(sol) free energy of system = (1) + (5) -261.929 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds