Wall clock time and date at job start Tue Mar 9 2021 14:20:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45194 * 1 3 3 C 1.34231 * 116.99942 * 2 1 4 4 O 1.20829 * 120.00362 * 0.02562 * 3 2 1 5 5 C 1.50706 * 120.00202 * 180.02562 * 3 2 1 6 6 N 1.46506 * 112.84636 * 334.66912 * 5 3 2 7 7 C 1.34768 * 119.99939 * 50.32854 * 6 5 3 8 8 O 1.21281 * 120.00738 * 0.02562 * 7 6 5 9 9 C 1.50711 * 119.99878 * 179.97438 * 7 6 5 10 10 O 1.42899 * 109.47088 * 180.02562 * 9 7 6 11 11 C 1.35896 * 116.99771 * 180.02562 * 10 9 7 12 12 C 1.38738 * 120.05755 * 359.72668 * 11 10 9 13 13 C 1.38147 * 119.94080 * 179.74527 * 12 11 10 14 14 C 1.38265 * 120.05682 * 0.50758 * 13 12 11 15 15 C 1.50700 * 119.94305 * 179.74672 * 14 13 12 16 16 O 1.42893 * 109.47392 * 120.01828 * 15 14 13 17 17 Si 1.86309 * 109.46892 * 0.02562 * 15 14 13 18 18 C 1.38262 * 120.11284 * 359.76459 * 14 13 12 19 19 C 1.38143 * 120.05580 * 359.97438 * 18 14 13 20 20 C 1.53780 * 113.61555 * 203.47446 * 5 3 2 21 21 C 1.53778 * 87.07870 * 220.01726 * 20 5 3 22 22 O 1.42905 * 113.61626 * 270.80087 * 21 20 5 23 23 C 1.52999 * 113.61906 * 139.98045 * 21 20 5 24 24 F 1.39899 * 109.47039 * 59.99345 * 23 21 20 25 25 F 1.39900 * 109.47743 * 179.97438 * 23 21 20 26 26 F 1.39908 * 109.46821 * 300.00095 * 23 21 20 27 27 C 1.53781 * 113.61527 * 105.86269 * 5 3 2 28 28 H 1.09012 * 109.47222 * 59.99894 * 1 2 3 29 29 H 1.08995 * 109.47381 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.47150 * 300.00288 * 1 2 3 31 31 H 0.96995 * 119.99759 * 230.33611 * 6 5 3 32 32 H 1.08993 * 109.47134 * 300.00428 * 9 7 6 33 33 H 1.09002 * 109.46461 * 60.00279 * 9 7 6 34 34 H 1.07997 * 120.02590 * 359.97438 * 12 11 10 35 35 H 1.07999 * 119.96526 * 180.22512 * 13 12 11 36 36 H 1.08998 * 109.47325 * 240.02267 * 15 14 13 37 37 H 0.96701 * 114.00188 * 299.99799 * 16 15 14 38 38 H 1.48495 * 109.99784 * 58.68463 * 17 15 14 39 39 H 1.48498 * 109.99704 * 179.97438 * 17 15 14 40 40 H 1.07998 * 119.97295 * 179.97438 * 18 14 13 41 41 H 1.08005 * 120.02967 * 180.02562 * 19 18 14 42 42 H 1.09000 * 113.61461 * 334.56184 * 20 5 3 43 43 H 1.09000 * 113.61692 * 105.38457 * 20 5 3 44 44 H 0.96695 * 114.00539 * 180.02562 * 22 21 20 45 45 H 1.09005 * 113.61233 * 254.53070 * 27 5 3 46 46 H 1.08999 * 113.61553 * 25.43259 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2750 -0.0006 6 7 4.1985 0.0860 0.5766 7 6 3.8371 -1.1416 0.1539 8 8 2.9890 -1.2623 -0.7045 9 6 4.4879 -2.3647 0.7472 10 8 3.9410 -3.5371 0.1402 11 6 4.4229 -4.7342 0.5660 12 6 5.4061 -4.7795 1.5438 13 6 5.8906 -5.9980 1.9787 14 6 5.4039 -7.1714 1.4328 15 6 5.9383 -8.4990 1.9050 16 8 4.8696 -9.2767 2.4480 17 14 7.2302 -8.2171 3.2175 18 6 4.4281 -7.1288 0.4542 19 6 3.9365 -5.9131 0.0197 20 6 4.1140 2.5977 0.5607 21 6 5.1639 2.5482 -0.5618 22 8 6.3553 1.8466 -0.2008 23 6 5.4465 3.9110 -1.1973 24 9 5.9216 4.7919 -0.2198 25 9 6.4094 3.7665 -2.2019 26 9 4.2672 4.4209 -1.7509 27 6 4.1608 1.6921 -1.3561 28 1 -0.3634 0.5139 -0.8901 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3633 0.5139 0.8899 31 1 4.8770 0.1824 1.2629 32 1 5.5620 -2.3291 0.5654 33 1 4.3018 -2.3904 1.8209 34 1 5.7898 -3.8630 1.9673 35 1 6.6533 -6.0338 2.7424 36 1 6.3841 -9.0309 1.0645 37 1 4.4258 -8.8636 3.2013 38 1 6.6427 -7.4649 4.3550 39 1 7.7646 -9.5188 3.6919 40 1 4.0499 -8.0467 0.0291 41 1 3.1740 -5.8803 -0.7444 42 1 3.4179 3.4317 0.4710 43 1 4.5375 2.5056 1.5609 44 1 7.0197 1.8123 -0.9026 45 1 4.6233 0.8695 -1.9017 46 1 3.4774 2.2779 -1.9709 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18364788_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:20:05 Heat of formation + Delta-G solvation = -301.719414 kcal Electronic energy + Delta-G solvation = -39954.498515 eV Core-core repulsion = 33977.905713 eV Total energy + Delta-G solvation = -5976.592802 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.121 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -51.28803 -48.83361 -48.75521 -42.69854 -41.37918 -40.63017 -40.00483 -38.91099 -37.61474 -37.21890 -36.46485 -34.31714 -32.35795 -31.70357 -30.34817 -28.94685 -28.45217 -27.58487 -26.22021 -25.53469 -24.04848 -22.76427 -22.37805 -21.84154 -20.75104 -20.22058 -19.62007 -19.54626 -19.40951 -19.04087 -18.34874 -18.27940 -17.84081 -17.57166 -17.27374 -17.14189 -16.79287 -16.39557 -16.35134 -16.14941 -15.76625 -15.61103 -15.51922 -15.33707 -15.20439 -15.17774 -15.03901 -14.92848 -14.86042 -14.78981 -14.58860 -14.49949 -14.34009 -14.13685 -13.85775 -13.67047 -13.57600 -13.47432 -13.34186 -13.05260 -12.81483 -12.29124 -12.26518 -12.10889 -12.02089 -11.90377 -11.82174 -11.59808 -11.40815 -10.85857 -10.56828 -10.39158 -9.99617 -9.18605 -4.88897 0.31675 0.35123 0.78730 1.29664 1.35853 1.36369 1.51958 1.63425 1.71485 2.00961 2.22538 2.42105 2.45064 2.54279 2.67976 2.69254 2.93866 3.23982 3.35424 3.46270 3.51420 3.69203 3.77835 3.86704 3.99329 4.05755 4.10969 4.17028 4.18155 4.22144 4.23887 4.34706 4.35112 4.46853 4.49078 4.55307 4.59220 4.62498 4.73427 5.01425 5.11434 5.20252 5.26732 5.29894 5.53586 5.73276 6.21938 6.28495 6.44527 6.52694 6.52867 7.13972 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.023 3.977 2 O -0.322 6.322 3 C 0.463 3.537 4 O -0.527 6.527 5 C 0.171 3.829 6 N -0.683 5.683 7 C 0.510 3.490 8 O -0.516 6.516 9 C 0.041 3.959 10 O -0.315 6.315 11 C 0.125 3.875 12 C -0.200 4.200 13 C -0.076 4.076 14 C -0.159 4.159 15 C -0.082 4.082 16 O -0.552 6.552 17 Si 0.772 3.228 18 C -0.062 4.062 19 C -0.166 4.166 20 C -0.098 4.098 21 C 0.087 3.913 22 O -0.500 6.500 23 C 0.435 3.565 24 F -0.177 7.177 25 F -0.180 7.180 26 F -0.180 7.180 27 C -0.149 4.149 28 H 0.058 0.942 29 H 0.114 0.886 30 H 0.065 0.935 31 H 0.431 0.569 32 H 0.130 0.870 33 H 0.122 0.878 34 H 0.166 0.834 35 H 0.152 0.848 36 H 0.121 0.879 37 H 0.385 0.615 38 H -0.278 1.278 39 H -0.310 1.310 40 H 0.131 0.869 41 H 0.126 0.874 42 H 0.130 0.870 43 H 0.140 0.860 44 H 0.410 0.590 45 H 0.114 0.886 46 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.702 0.718 3.699 7.689 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.236 6.236 3 C 0.305 3.695 4 O -0.416 6.416 5 C 0.081 3.919 6 N -0.342 5.342 7 C 0.296 3.704 8 O -0.390 6.390 9 C -0.036 4.036 10 O -0.228 6.228 11 C 0.080 3.920 12 C -0.218 4.218 13 C -0.093 4.093 14 C -0.160 4.160 15 C -0.191 4.191 16 O -0.360 6.360 17 Si 0.677 3.323 18 C -0.080 4.080 19 C -0.185 4.185 20 C -0.135 4.135 21 C 0.043 3.957 22 O -0.309 6.309 23 C 0.381 3.619 24 F -0.159 7.159 25 F -0.162 7.162 26 F -0.162 7.162 27 C -0.188 4.188 28 H 0.076 0.924 29 H 0.132 0.868 30 H 0.083 0.917 31 H 0.272 0.728 32 H 0.148 0.852 33 H 0.140 0.860 34 H 0.183 0.817 35 H 0.169 0.831 36 H 0.138 0.862 37 H 0.235 0.765 38 H -0.205 1.205 39 H -0.238 1.238 40 H 0.149 0.851 41 H 0.144 0.856 42 H 0.148 0.852 43 H 0.158 0.842 44 H 0.264 0.736 45 H 0.133 0.867 46 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 5.817 0.339 3.808 6.961 hybrid contribution -1.065 0.290 -0.221 1.126 sum 4.752 0.629 3.587 5.987 Atomic orbital electron populations 1.23456 0.76596 1.04754 1.02217 1.87014 1.23383 1.31234 1.82016 1.23923 0.91802 0.81947 0.71813 1.90700 1.66927 1.37217 1.46766 1.20650 0.84641 0.88552 0.98093 1.45188 1.43439 1.02042 1.43558 1.20512 0.82362 0.84596 0.82897 1.90832 1.30849 1.86040 1.31239 1.22650 1.00197 0.81384 0.99411 1.86117 1.62385 1.12293 1.62047 1.19163 0.93858 0.84802 0.94208 1.21510 0.99757 1.00498 1.00048 1.21060 0.98441 0.91217 0.98626 1.20268 1.00306 0.95612 0.99820 1.25234 0.96080 0.91117 1.06638 1.86567 1.49220 1.48386 1.51836 0.94166 0.81697 0.79455 0.76977 1.20892 0.94977 0.96962 0.95138 1.20605 1.03799 0.90402 1.03669 1.23504 0.94431 0.94881 1.00703 1.23034 0.88663 0.86108 0.97908 1.86540 1.26016 1.74005 1.44389 1.21246 0.74308 0.89384 0.77012 1.93230 1.88490 1.71903 1.62246 1.93202 1.64563 1.95829 1.62576 1.93217 1.47883 1.88849 1.86231 1.24179 0.97777 1.01068 0.95765 0.92364 0.86796 0.91670 0.72810 0.85199 0.86033 0.81677 0.83076 0.86168 0.76543 1.20454 1.23843 0.85086 0.85574 0.85194 0.84232 0.73643 0.86743 0.87009 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.09 10.56 113.37 1.20 1.28 16 2 O -0.32 -2.31 6.31 -43.44 -0.27 -2.58 16 3 C 0.46 2.49 7.07 71.24 0.50 2.99 16 4 O -0.53 -5.15 15.79 21.95 0.35 -4.80 16 5 C 0.17 -0.42 1.11 3.38 0.00 -0.42 16 6 N -0.68 4.83 4.76 -423.90 -2.02 2.81 16 7 C 0.51 -0.83 7.26 87.66 0.64 -0.20 16 8 O -0.52 -4.26 13.03 27.22 0.35 -3.90 16 9 C 0.04 -0.29 5.22 71.24 0.37 0.08 16 10 O -0.32 -0.68 9.67 -73.34 -0.71 -1.39 16 11 C 0.12 0.08 6.69 22.51 0.15 0.23 16 12 C -0.20 0.99 9.04 22.37 0.20 1.19 16 13 C -0.08 0.35 8.66 22.25 0.19 0.54 16 14 C -0.16 0.21 5.39 -19.85 -0.11 0.10 16 15 C -0.08 0.14 2.82 71.24 0.20 0.34 16 16 O -0.55 -1.16 12.77 -148.98 -1.90 -3.06 16 17 Si 0.77 -3.03 29.78 68.60 2.04 -0.99 16 18 C -0.06 -0.08 9.60 22.25 0.21 0.13 16 19 C -0.17 -0.45 9.99 22.37 0.22 -0.23 16 20 C -0.10 0.59 6.41 31.12 0.20 0.79 16 21 C 0.09 -0.56 1.36 -10.21 -0.01 -0.58 16 22 O -0.50 5.47 12.79 -148.98 -1.91 3.56 16 23 C 0.44 -0.95 2.85 71.98 0.21 -0.75 16 24 F -0.18 0.01 17.18 44.97 0.77 0.78 16 25 F -0.18 0.34 16.65 44.97 0.75 1.09 16 26 F -0.18 -0.27 15.76 44.97 0.71 0.44 16 27 C -0.15 0.50 6.70 31.18 0.21 0.71 16 28 H 0.06 0.25 8.14 -2.38 -0.02 0.23 16 29 H 0.11 0.06 8.14 -2.39 -0.02 0.04 16 30 H 0.06 0.15 8.13 -2.39 -0.02 0.13 16 31 H 0.43 -6.03 8.48 -92.71 -0.79 -6.82 16 32 H 0.13 -1.78 7.65 -2.39 -0.02 -1.80 16 33 H 0.12 -1.52 7.67 -2.39 -0.02 -1.53 16 34 H 0.17 -2.05 6.30 -2.91 -0.02 -2.07 16 35 H 0.15 -1.42 4.87 -2.91 -0.01 -1.43 16 36 H 0.12 -0.32 7.96 -2.39 -0.02 -0.34 16 37 H 0.39 -1.36 8.70 -74.06 -0.64 -2.00 16 38 H -0.28 0.28 7.11 99.48 0.71 0.99 16 39 H -0.31 -1.49 7.11 99.48 0.71 -0.78 16 40 H 0.13 0.10 8.06 -2.91 -0.02 0.08 16 41 H 0.13 0.41 8.06 -2.91 -0.02 0.39 16 42 H 0.13 -0.45 7.12 -2.39 -0.02 -0.47 16 43 H 0.14 -1.55 8.11 -2.39 -0.02 -1.57 16 44 H 0.41 -6.47 8.42 -74.06 -0.62 -7.10 16 45 H 0.11 -0.48 8.14 -2.38 -0.02 -0.50 16 46 H 0.11 -0.11 7.10 -2.39 -0.02 -0.13 16 Total: 0.00 -28.15 400.48 1.65 -26.51 By element: Atomic # 1 Polarization: -23.77 SS G_CDS: -0.91 Total: -24.67 kcal Atomic # 6 Polarization: 1.83 SS G_CDS: 4.39 Total: 6.22 kcal Atomic # 7 Polarization: 4.83 SS G_CDS: -2.02 Total: 2.81 kcal Atomic # 8 Polarization: -8.09 SS G_CDS: -4.09 Total: -12.18 kcal Atomic # 9 Polarization: 0.08 SS G_CDS: 2.23 Total: 2.31 kcal Atomic # 14 Polarization: -3.03 SS G_CDS: 2.04 Total: -0.99 kcal Total: -28.15 1.65 -26.51 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -275.213 kcal (2) G-P(sol) polarization free energy of solvation -28.152 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -303.366 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.646 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.506 kcal (6) G-S(sol) free energy of system = (1) + (5) -301.719 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.32 seconds