Wall clock time and date at job start Tue Mar 9 2021 14:20:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34233 * 117.00035 * 2 1 4 4 O 1.20827 * 119.99931 * 359.97438 * 3 2 1 5 5 C 1.50697 * 119.99906 * 180.02562 * 3 2 1 6 6 N 1.46499 * 112.84862 * 324.46573 * 5 3 2 7 7 C 1.34772 * 120.00431 * 294.08473 * 6 5 3 8 8 O 1.21283 * 119.99708 * 355.00628 * 7 6 5 9 9 C 1.50697 * 120.00486 * 175.28382 * 7 6 5 10 10 O 1.42896 * 109.47290 * 179.72672 * 9 7 6 11 11 C 1.35997 * 117.00065 * 179.97438 * 10 9 7 12 12 C 1.39154 * 120.07457 * 179.97438 * 11 10 9 13 13 O 1.35998 * 120.07149 * 0.02562 * 12 11 10 14 14 C 1.42903 * 117.00057 * 179.97438 * 13 12 11 15 15 C 1.38559 * 119.85397 * 179.97438 * 12 11 10 16 16 C 1.38244 * 120.00243 * 0.02562 * 15 12 11 17 17 C 1.50694 * 119.92919 * 180.02562 * 16 15 12 18 18 O 1.42893 * 109.47302 * 255.00205 * 17 16 15 19 19 Si 1.86306 * 109.47083 * 14.99971 * 17 16 15 20 20 C 1.38250 * 120.14098 * 0.02562 * 16 15 12 21 21 N 1.48010 * 119.92381 * 180.02562 * 20 16 15 22 22 O 1.21795 * 120.00199 * 179.97438 * 21 20 16 23 23 O 1.21807 * 119.99860 * 359.97438 * 21 20 16 24 24 C 1.38241 * 120.14885 * 359.74480 * 20 16 15 25 25 C 1.53782 * 113.61250 * 193.26956 * 5 3 2 26 26 C 1.53782 * 87.08008 * 219.93267 * 25 5 3 27 27 O 1.42900 * 113.61623 * 270.88260 * 26 25 5 28 28 C 1.52998 * 113.60986 * 139.98053 * 26 25 5 29 29 F 1.39897 * 109.47325 * 60.00441 * 28 26 25 30 30 F 1.39906 * 109.46934 * 179.97438 * 28 26 25 31 31 F 1.39892 * 109.47557 * 299.99846 * 28 26 25 32 32 C 1.53777 * 113.69054 * 95.73553 * 5 3 2 33 33 H 1.09003 * 109.47233 * 299.99979 * 1 2 3 34 34 H 1.09007 * 109.47387 * 60.00099 * 1 2 3 35 35 H 1.09002 * 109.47206 * 179.97438 * 1 2 3 36 36 H 0.97008 * 120.00084 * 114.08981 * 6 5 3 37 37 H 1.09005 * 109.46610 * 299.72057 * 9 7 6 38 38 H 1.08994 * 109.47278 * 59.72101 * 9 7 6 39 39 H 1.09001 * 109.46651 * 300.00157 * 14 13 12 40 40 H 1.09002 * 109.47031 * 59.99597 * 14 13 12 41 41 H 1.08998 * 109.47278 * 180.02562 * 14 13 12 42 42 H 1.08001 * 119.99815 * 180.02562 * 15 12 11 43 43 H 1.08996 * 109.47617 * 134.99554 * 17 16 15 44 44 H 0.96704 * 114.00415 * 59.99598 * 18 17 16 45 45 H 1.48507 * 109.99946 * 179.97438 * 19 17 16 46 46 H 1.48501 * 110.00045 * 301.32005 * 19 17 16 47 47 H 1.08004 * 119.99989 * 180.27405 * 24 20 16 48 48 H 1.09000 * 113.61891 * 334.48374 * 25 5 3 49 49 H 1.09004 * 113.61141 * 105.38830 * 25 5 3 50 50 H 0.96700 * 113.99591 * 180.02562 * 27 26 25 51 51 H 1.09003 * 113.61437 * 254.53581 * 32 5 3 52 52 H 1.09003 * 113.61934 * 25.44073 * 32 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1921 0.2073 0.7836 7 6 4.0176 0.1612 2.1192 8 8 3.4189 1.0523 2.6836 9 6 4.5717 -0.9943 2.9121 10 8 4.2648 -0.8131 4.2959 11 6 4.6964 -1.7749 5.1551 12 6 4.4332 -1.6624 6.5169 13 8 3.7434 -0.5907 6.9915 14 6 3.5095 -0.5419 8.4004 15 6 4.8745 -2.6453 7.3881 16 6 5.5751 -3.7344 6.9041 17 6 6.0537 -4.8026 7.8530 18 8 7.4628 -4.6688 8.0494 19 14 5.1788 -4.6188 9.4875 20 6 5.8374 -3.8455 5.5512 21 7 6.5874 -5.0138 5.0381 22 8 6.8189 -5.1133 3.8465 23 8 6.9731 -5.8757 5.8076 24 6 5.3958 -2.8708 4.6760 25 6 4.1098 2.6766 0.3229 26 6 5.1715 2.4293 -0.7618 27 8 6.3573 1.8019 -0.2698 28 6 5.4624 3.6580 -1.6259 29 9 5.9285 4.6985 -0.8151 30 9 6.4357 3.3382 -2.5786 31 9 4.2898 4.0609 -2.2736 32 6 4.1754 1.4480 -1.4019 33 1 -0.3634 0.5138 0.8900 34 1 -0.3634 0.5138 -0.8900 35 1 -0.3634 -1.0277 -0.0005 36 1 4.7323 -0.4664 0.3415 37 1 4.1250 -1.9241 2.5597 38 1 5.6530 -1.0386 2.7824 39 1 2.9356 -1.4174 8.7039 40 1 4.4638 -0.5326 8.9270 41 1 2.9504 0.3613 8.6448 42 1 4.6712 -2.5606 8.4455 43 1 5.8371 -5.7850 7.4335 44 1 7.7289 -3.8167 8.4212 45 1 5.6417 -5.6670 10.4322 46 1 5.4403 -3.2716 10.0550 47 1 5.5983 -2.9623 3.6191 48 1 3.4158 3.4810 0.0793 49 1 4.5239 2.7631 1.3275 50 1 7.0289 1.6441 -0.9474 51 1 4.6425 0.5428 -1.7899 52 1 3.4993 1.9165 -2.1172 There are 88 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 88 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18364788_4549636.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:20:36 Heat of formation + Delta-G solvation = -329.865459 kcal Electronic energy + Delta-G solvation = -52562.586245 eV Core-core repulsion = 45279.536692 eV Total energy + Delta-G solvation = -7283.049552 eV No. of doubly occupied orbitals = 88 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 481.130 amu Computer time = 1.99 seconds Orbital eigenvalues (eV) -51.31921 -48.85063 -48.79791 -43.36298 -42.78779 -42.06677 -40.94934 -40.36201 -39.46561 -39.19585 -37.74085 -37.70748 -37.22565 -36.61296 -34.49660 -32.68398 -32.53644 -30.51439 -29.29757 -28.78567 -28.43704 -27.89970 -27.60072 -25.90651 -25.54556 -23.99029 -23.23677 -22.67620 -22.20203 -20.95280 -20.71294 -20.27493 -19.85910 -19.62248 -19.55068 -19.52901 -19.07234 -18.81068 -18.63319 -18.37871 -18.06706 -17.80022 -17.72058 -17.45211 -17.38507 -17.16017 -16.86139 -16.48735 -16.37633 -16.19565 -15.96220 -15.69596 -15.64962 -15.60550 -15.27872 -15.22560 -15.08343 -14.98464 -14.95110 -14.88443 -14.77115 -14.51876 -14.47449 -14.18303 -13.92420 -13.80911 -13.72533 -13.64002 -13.43913 -13.22991 -13.05905 -12.78039 -12.68807 -12.47919 -12.46584 -12.40860 -12.37268 -12.21544 -12.10890 -11.95026 -11.89682 -11.69265 -11.59292 -11.18598 -10.63893 -10.53646 -10.47194 -9.48971 -5.00333 -1.32814 -0.42712 0.19671 0.33722 0.72851 1.09418 1.13656 1.14218 1.32217 1.46591 1.64455 1.87692 1.89226 1.94183 2.12687 2.21411 2.42437 2.46868 2.64617 2.88724 2.98687 3.13055 3.20534 3.25865 3.33533 3.36567 3.43681 3.49216 3.65900 3.88154 3.94848 3.95391 4.05790 4.06868 4.10105 4.18605 4.20746 4.22703 4.25920 4.30562 4.31161 4.37995 4.45920 4.55452 4.60725 4.62619 4.71828 4.76796 4.99533 5.14831 5.30006 5.55905 6.03299 6.21954 6.28733 6.43788 6.43803 6.52153 6.91732 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.350 6.350 3 C 0.468 3.532 4 O -0.522 6.522 5 C 0.171 3.829 6 N -0.672 5.672 7 C 0.523 3.477 8 O -0.553 6.553 9 C 0.031 3.969 10 O -0.291 6.291 11 C 0.103 3.897 12 C 0.168 3.832 13 O -0.307 6.307 14 C 0.000 4.000 15 C -0.173 4.173 16 C -0.034 4.034 17 C -0.101 4.101 18 O -0.528 6.528 19 Si 0.773 3.227 20 C -0.042 4.042 21 N 0.036 4.964 22 O -0.183 6.183 23 O -0.166 6.166 24 C -0.107 4.107 25 C -0.114 4.114 26 C 0.083 3.917 27 O -0.504 6.504 28 C 0.436 3.564 29 F -0.185 7.185 30 F -0.175 7.175 31 F -0.177 7.177 32 C -0.127 4.127 33 H 0.051 0.949 34 H 0.069 0.931 35 H 0.134 0.866 36 H 0.435 0.565 37 H 0.135 0.865 38 H 0.134 0.866 39 H 0.089 0.911 40 H 0.074 0.926 41 H 0.121 0.879 42 H 0.186 0.814 43 H 0.129 0.871 44 H 0.383 0.617 45 H -0.295 1.295 46 H -0.251 1.251 47 H 0.187 0.813 48 H 0.119 0.881 49 H 0.095 0.905 50 H 0.411 0.589 51 H 0.157 0.843 52 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.429 -2.666 -0.806 3.695 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.265 6.265 3 C 0.309 3.691 4 O -0.409 6.409 5 C 0.081 3.919 6 N -0.330 5.330 7 C 0.309 3.691 8 O -0.429 6.429 9 C -0.047 4.047 10 O -0.204 6.204 11 C 0.056 3.944 12 C 0.119 3.881 13 O -0.219 6.219 14 C -0.094 4.094 15 C -0.191 4.191 16 C -0.036 4.036 17 C -0.208 4.208 18 O -0.336 6.336 19 Si 0.674 3.326 20 C -0.126 4.126 21 N 0.549 4.451 22 O -0.394 6.394 23 O -0.379 6.379 24 C -0.127 4.127 25 C -0.152 4.152 26 C 0.039 3.961 27 O -0.314 6.314 28 C 0.381 3.619 29 F -0.167 7.167 30 F -0.156 7.156 31 F -0.159 7.159 32 C -0.164 4.164 33 H 0.070 0.930 34 H 0.088 0.912 35 H 0.152 0.848 36 H 0.276 0.724 37 H 0.153 0.847 38 H 0.151 0.849 39 H 0.107 0.893 40 H 0.093 0.907 41 H 0.139 0.861 42 H 0.202 0.798 43 H 0.147 0.853 44 H 0.232 0.768 45 H -0.223 1.223 46 H -0.176 1.176 47 H 0.204 0.796 48 H 0.137 0.863 49 H 0.114 0.886 50 H 0.265 0.735 51 H 0.175 0.825 52 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -3.859 -1.258 0.890 4.155 hybrid contribution 1.741 0.339 -1.053 2.063 sum -2.118 -0.919 -0.163 2.314 Atomic orbital electron populations 1.23584 0.74713 1.05913 1.02426 1.86483 1.24865 1.32060 1.83109 1.23867 0.91759 0.81815 0.71643 1.90705 1.66928 1.37468 1.45832 1.20661 0.84358 0.90434 0.96416 1.45012 1.52873 1.29654 1.05503 1.20439 0.79170 0.86951 0.82536 1.90829 1.42043 1.39528 1.70518 1.22857 1.04343 0.98367 0.79107 1.86291 1.74016 1.42848 1.17226 1.17914 0.98825 0.89654 0.88017 1.18683 0.91473 0.87932 0.89992 1.86327 1.68090 1.39241 1.28241 1.23732 1.03241 1.06362 0.76026 1.21203 1.02992 0.93109 1.01832 1.20076 0.95077 0.96595 0.91886 1.25748 0.86708 1.00272 1.08050 1.86773 1.20309 1.41275 1.85198 0.94266 0.88097 0.78411 0.71820 1.20526 1.07124 0.90523 0.94421 1.43684 0.98967 1.01968 1.00459 1.94501 1.61253 1.83860 0.99795 1.94585 1.53990 1.35328 1.54019 1.20920 0.97881 0.91157 1.02694 1.23448 0.95004 0.96209 1.00528 1.23051 0.88783 0.89378 0.94927 1.86660 1.26251 1.79055 1.39449 1.21219 0.74509 0.86428 0.79723 1.93221 1.88881 1.61599 1.72952 1.93213 1.63693 1.92481 1.66205 1.93208 1.48233 1.91800 1.82618 1.24103 0.96885 1.02595 0.92801 0.92970 0.91238 0.84793 0.72400 0.84742 0.84895 0.89256 0.90736 0.86084 0.79771 0.85328 0.76815 1.22267 1.17626 0.79590 0.86314 0.88594 0.73503 0.82538 0.85174 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.35 -0.52 10.41 -51.45 -0.54 -1.06 16 3 C 0.47 2.05 6.59 71.23 0.47 2.52 16 4 O -0.52 -5.82 15.66 21.96 0.34 -5.48 16 5 C 0.17 -0.36 1.00 3.38 0.00 -0.35 16 6 N -0.67 4.29 4.53 -423.94 -1.92 2.37 16 7 C 0.52 0.02 7.46 87.66 0.65 0.67 16 8 O -0.55 -6.20 15.04 16.00 0.24 -5.96 16 9 C 0.03 -0.18 5.22 71.23 0.37 0.19 16 10 O -0.29 -0.58 9.45 -67.10 -0.63 -1.21 16 11 C 0.10 -0.06 6.70 22.57 0.15 0.10 16 12 C 0.17 -0.20 6.70 22.57 0.15 -0.05 16 13 O -0.31 -0.06 10.28 -79.66 -0.82 -0.88 16 14 C 0.00 0.00 9.81 113.37 1.11 1.11 16 15 C -0.17 0.85 7.65 22.35 0.17 1.02 16 16 C -0.03 0.05 5.26 -19.86 -0.10 -0.06 16 17 C -0.10 0.07 1.74 71.23 0.12 0.20 16 18 O -0.53 -1.44 11.80 -129.63 -1.53 -2.97 16 19 Si 0.77 -4.51 30.24 68.60 2.07 -2.43 16 20 C -0.04 -0.07 6.85 36.38 0.25 0.18 16 21 N 0.04 0.27 4.45 -46.46 -0.21 0.07 16 22 O -0.18 -1.56 18.44 18.89 0.35 -1.21 16 23 O -0.17 -1.83 14.62 25.09 0.37 -1.46 16 24 C -0.11 0.25 8.54 22.35 0.19 0.44 16 25 C -0.11 -0.16 5.98 31.12 0.19 0.02 16 26 C 0.08 -0.42 1.36 -10.27 -0.01 -0.44 16 27 O -0.50 4.29 12.91 -148.98 -1.92 2.36 16 28 C 0.44 -0.56 2.85 71.98 0.21 -0.36 16 29 F -0.19 -0.68 17.18 44.97 0.77 0.09 16 30 F -0.17 0.50 16.65 44.97 0.75 1.25 16 31 F -0.18 -0.17 15.75 44.97 0.71 0.54 16 32 C -0.13 1.14 6.63 31.12 0.21 1.35 16 33 H 0.05 0.08 8.13 -2.39 -0.02 0.06 16 34 H 0.07 -0.14 8.13 -2.38 -0.02 -0.15 16 35 H 0.13 -1.03 8.14 -2.39 -0.02 -1.05 16 36 H 0.43 -6.51 8.66 -92.70 -0.80 -7.31 16 37 H 0.14 -1.67 7.65 -2.38 -0.02 -1.69 16 38 H 0.13 -1.63 7.67 -2.39 -0.02 -1.65 16 39 H 0.09 -1.16 7.66 -2.39 -0.02 -1.17 16 40 H 0.07 -0.81 7.66 -2.39 -0.02 -0.83 16 41 H 0.12 -1.22 8.14 -2.39 -0.02 -1.24 16 42 H 0.19 -1.86 3.09 -2.91 -0.01 -1.86 16 43 H 0.13 0.22 6.07 -2.39 -0.01 0.21 16 44 H 0.38 -1.83 8.70 -74.05 -0.64 -2.47 16 45 H -0.30 -0.81 7.11 99.48 0.71 -0.10 16 46 H -0.25 1.67 6.68 99.48 0.66 2.34 16 47 H 0.19 -1.38 5.85 -2.91 -0.02 -1.40 16 48 H 0.12 0.48 7.09 -2.39 -0.02 0.47 16 49 H 0.10 0.54 7.20 -2.38 -0.02 0.52 16 50 H 0.41 -6.56 8.42 -74.06 -0.62 -7.18 16 51 H 0.16 -2.68 8.09 -2.39 -0.02 -2.70 16 52 H 0.13 -1.09 7.09 -2.39 -0.02 -1.11 16 Total: 0.00 -38.99 455.57 2.40 -36.59 By element: Atomic # 1 Polarization: -27.35 SS G_CDS: -0.96 Total: -28.31 kcal Atomic # 6 Polarization: 2.37 SS G_CDS: 5.32 Total: 7.69 kcal Atomic # 7 Polarization: 4.57 SS G_CDS: -2.13 Total: 2.44 kcal Atomic # 8 Polarization: -13.72 SS G_CDS: -4.14 Total: -17.86 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 2.23 Total: 1.88 kcal Atomic # 14 Polarization: -4.51 SS G_CDS: 2.07 Total: -2.43 kcal Total: -38.99 2.40 -36.59 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_4549636.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -293.274 kcal (2) G-P(sol) polarization free energy of solvation -38.989 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -332.262 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.397 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.592 kcal (6) G-S(sol) free energy of system = (1) + (5) -329.865 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.00 seconds