Wall clock time and date at job start Tue Mar 9 2021 14:20:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34231 * 116.99983 * 2 1 4 4 O 1.20822 * 120.00142 * 0.02562 * 3 2 1 5 5 C 1.50698 * 120.00053 * 180.02562 * 3 2 1 6 6 N 1.46504 * 112.85135 * 336.19769 * 5 3 2 7 7 C 1.34783 * 120.00018 * 50.32996 * 6 5 3 8 8 O 1.21282 * 119.99339 * 0.02562 * 7 6 5 9 9 C 1.50693 * 120.00032 * 180.02562 * 7 6 5 10 10 O 1.42903 * 109.46871 * 180.02562 * 9 7 6 11 11 C 1.35907 * 116.99553 * 180.02562 * 10 9 7 12 12 C 1.38713 * 120.05052 * 179.73046 * 11 10 9 13 13 C 1.38166 * 119.94132 * 179.76316 * 12 11 10 14 14 C 1.50700 * 119.97248 * 180.22931 * 13 12 11 15 15 O 1.42899 * 109.47008 * 65.25576 * 14 13 12 16 16 Si 1.86303 * 109.47069 * 185.26027 * 14 13 12 17 17 C 1.38244 * 120.05460 * 0.48608 * 13 12 11 18 18 C 1.38287 * 120.11312 * 359.76790 * 17 13 12 19 19 C 1.38119 * 120.05516 * 359.97438 * 18 17 13 20 20 C 1.53783 * 113.61592 * 205.00183 * 5 3 2 21 21 C 1.53775 * 87.08213 * 220.01675 * 20 5 3 22 22 O 1.42896 * 113.61645 * 270.88302 * 21 20 5 23 23 C 1.53006 * 113.61477 * 140.06306 * 21 20 5 24 24 F 1.39900 * 109.47012 * 60.00146 * 23 21 20 25 25 F 1.39894 * 109.46977 * 179.97438 * 23 21 20 26 26 F 1.39896 * 109.47150 * 300.00069 * 23 21 20 27 27 C 1.53777 * 113.61770 * 107.50499 * 5 3 2 28 28 H 1.09002 * 109.47379 * 59.99613 * 1 2 3 29 29 H 1.09001 * 109.46782 * 299.99696 * 1 2 3 30 30 H 1.09004 * 109.47085 * 179.97438 * 1 2 3 31 31 H 0.97005 * 120.00078 * 230.33850 * 6 5 3 32 32 H 1.09002 * 109.47534 * 300.00680 * 9 7 6 33 33 H 1.09000 * 109.46988 * 60.00342 * 9 7 6 34 34 H 1.07997 * 120.03012 * 359.97438 * 12 11 10 35 35 H 1.08999 * 109.47106 * 305.25822 * 14 13 12 36 36 H 0.96698 * 113.99681 * 180.02562 * 15 14 13 37 37 H 1.48503 * 109.99703 * 299.99533 * 16 14 13 38 38 H 1.48491 * 110.00283 * 61.31574 * 16 14 13 39 39 H 1.07997 * 119.94385 * 179.73683 * 17 13 12 40 40 H 1.08001 * 119.97519 * 179.97438 * 18 17 13 41 41 H 1.08003 * 120.02914 * 179.97438 * 19 18 17 42 42 H 1.08998 * 113.61213 * 334.57142 * 20 5 3 43 43 H 1.09003 * 113.61227 * 105.46869 * 20 5 3 44 44 H 0.96701 * 114.00337 * 180.02562 * 22 21 20 45 45 H 1.08999 * 113.61542 * 254.53224 * 27 5 3 46 46 H 1.08996 * 113.61302 * 25.43051 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1993 0.0710 0.5438 7 6 3.8374 -1.1450 0.0890 8 8 2.9879 -1.2425 -0.7711 9 6 4.4881 -2.3834 0.6494 10 8 3.9405 -3.5392 0.0119 11 6 4.4224 -4.7474 0.4057 12 6 3.9314 -5.9113 -0.1674 13 6 4.4265 -7.1382 0.2311 14 6 3.8973 -8.4028 -0.3947 15 8 4.2453 -8.4303 -1.7804 16 14 4.6433 -9.8791 0.4625 17 6 5.4030 -7.2068 1.2072 18 6 5.8903 -6.0482 1.7838 19 6 5.4025 -4.8190 1.3851 20 6 4.1149 2.5823 0.5950 21 6 5.1632 2.5627 -0.5299 22 8 6.3543 1.8501 -0.1900 23 6 5.4464 3.9423 -1.1278 24 9 5.9239 4.7953 -0.1269 25 9 6.4078 3.8246 -2.1373 26 9 4.2670 4.4686 -1.6655 27 6 4.1588 1.7306 -1.3444 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 4.8789 0.1491 1.2316 32 1 5.5621 -2.3433 0.4679 33 1 4.3027 -2.4375 1.7221 34 1 3.1654 -5.8584 -0.9268 35 1 2.8126 -8.4328 -0.2919 36 1 3.9357 -9.2180 -2.2481 37 1 6.1221 -9.8500 0.3295 38 1 4.2623 -9.8793 1.8977 39 1 5.7856 -8.1670 1.5204 40 1 6.6529 -6.1045 2.5465 41 1 5.7831 -3.9144 1.8360 42 1 3.4186 3.4182 0.5286 43 1 4.5411 2.4632 1.5912 44 1 7.0177 1.8346 -0.8934 45 1 4.6204 0.9241 -1.9141 46 1 3.4746 2.3338 -1.9412 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_18364788_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:20:56 Heat of formation + Delta-G solvation = -296.207491 kcal Electronic energy + Delta-G solvation = -40066.780041 eV Core-core repulsion = 34090.426254 eV Total energy + Delta-G solvation = -5976.353787 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.121 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -51.33361 -48.87331 -48.78484 -42.74091 -41.43756 -40.57675 -40.06094 -38.80997 -37.50401 -37.29557 -36.60414 -34.43007 -32.64051 -31.78744 -30.22093 -28.84731 -28.46701 -27.74542 -26.79073 -25.54337 -23.72969 -23.08000 -22.48245 -21.70671 -20.80456 -20.30802 -19.67301 -19.55169 -19.21558 -19.01683 -18.42986 -18.29953 -17.85918 -17.59744 -17.45950 -17.38880 -17.15636 -16.79505 -16.48819 -15.95673 -15.81853 -15.64362 -15.51846 -15.26586 -15.22635 -15.14144 -15.06006 -14.95997 -14.90387 -14.76250 -14.58584 -14.50932 -14.27670 -14.17939 -13.94196 -13.78565 -13.68929 -13.56282 -13.23841 -12.97689 -12.93322 -12.42354 -12.38346 -12.22250 -12.11327 -11.93403 -11.81501 -11.67802 -11.48093 -10.86910 -10.46122 -10.39335 -9.94171 -9.31288 -4.98669 0.15297 0.35014 0.86692 1.19339 1.22189 1.30005 1.44756 1.62605 1.71057 1.95029 2.00988 2.26994 2.32901 2.41270 2.55234 2.59064 2.82405 3.12917 3.25155 3.35217 3.40861 3.67106 3.70143 3.76634 3.84336 3.85077 3.93306 3.94457 4.07731 4.09963 4.15690 4.20031 4.25279 4.32142 4.34445 4.35990 4.46208 4.56966 4.70651 4.92088 4.97161 5.16711 5.28556 5.38650 5.39522 5.57858 5.79478 6.09282 6.28740 6.60497 6.66612 6.99782 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.313 6.313 3 C 0.470 3.530 4 O -0.499 6.499 5 C 0.172 3.828 6 N -0.702 5.702 7 C 0.513 3.487 8 O -0.467 6.467 9 C 0.045 3.955 10 O -0.286 6.286 11 C 0.132 3.868 12 C -0.117 4.117 13 C -0.035 4.035 14 C -0.074 4.074 15 O -0.544 6.544 16 Si 0.688 3.312 17 C -0.160 4.160 18 C -0.071 4.071 19 C -0.206 4.206 20 C -0.101 4.101 21 C 0.067 3.933 22 O -0.507 6.507 23 C 0.439 3.561 24 F -0.171 7.171 25 F -0.179 7.179 26 F -0.169 7.169 27 C -0.148 4.148 28 H 0.063 0.937 29 H 0.060 0.940 30 H 0.102 0.898 31 H 0.414 0.586 32 H 0.096 0.904 33 H 0.095 0.905 34 H 0.138 0.862 35 H 0.077 0.923 36 H 0.383 0.617 37 H -0.250 1.250 38 H -0.255 1.255 39 H 0.121 0.879 40 H 0.131 0.869 41 H 0.132 0.868 42 H 0.140 0.860 43 H 0.115 0.885 44 H 0.397 0.603 45 H 0.110 0.890 46 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.869 -4.058 2.709 5.225 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.227 6.227 3 C 0.311 3.689 4 O -0.387 6.387 5 C 0.083 3.917 6 N -0.360 5.360 7 C 0.297 3.703 8 O -0.337 6.337 9 C -0.033 4.033 10 O -0.198 6.198 11 C 0.087 3.913 12 C -0.136 4.136 13 C -0.035 4.035 14 C -0.185 4.185 15 O -0.350 6.350 16 Si 0.589 3.411 17 C -0.178 4.178 18 C -0.089 4.089 19 C -0.224 4.224 20 C -0.138 4.138 21 C 0.023 3.977 22 O -0.315 6.315 23 C 0.384 3.616 24 F -0.152 7.152 25 F -0.160 7.160 26 F -0.150 7.150 27 C -0.186 4.186 28 H 0.082 0.918 29 H 0.079 0.921 30 H 0.120 0.880 31 H 0.252 0.748 32 H 0.114 0.886 33 H 0.113 0.887 34 H 0.155 0.845 35 H 0.095 0.905 36 H 0.231 0.769 37 H -0.175 1.175 38 H -0.179 1.179 39 H 0.138 0.862 40 H 0.149 0.851 41 H 0.150 0.850 42 H 0.158 0.842 43 H 0.133 0.867 44 H 0.249 0.751 45 H 0.129 0.871 46 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 1.349 -3.609 3.247 5.038 hybrid contribution 0.639 1.142 -0.096 1.312 sum 1.987 -2.467 3.151 4.468 Atomic orbital electron populations 1.23348 0.76862 1.03966 1.02278 1.86965 1.22821 1.30799 1.82135 1.23212 0.90419 0.82537 0.72773 1.90721 1.65942 1.36542 1.45467 1.20613 0.86588 0.87023 0.97481 1.45356 1.43673 1.03218 1.43793 1.20015 0.83079 0.83683 0.83478 1.90841 1.28553 1.85628 1.28725 1.22365 0.98867 0.83902 0.98213 1.86160 1.61353 1.11341 1.60969 1.18985 0.93427 0.84974 0.93958 1.20245 1.02804 0.88719 1.01808 1.19129 0.95572 0.93315 0.95478 1.24736 1.03054 1.02773 0.87919 1.86504 1.80990 1.47707 1.19820 0.95285 0.81086 0.84225 0.80515 1.20828 0.98991 0.98386 0.99595 1.20856 0.98356 0.91308 0.98412 1.21280 1.00797 0.99309 1.01051 1.23490 0.94740 0.96401 0.99181 1.23279 0.88277 0.87048 0.99062 1.86555 1.26480 1.73657 1.44796 1.20939 0.74769 0.89119 0.76797 1.93246 1.88360 1.73165 1.60444 1.93206 1.64646 1.96132 1.62026 1.93235 1.47180 1.88028 1.86566 1.24151 0.97617 1.00851 0.96022 0.91794 0.92093 0.87965 0.74842 0.88595 0.88721 0.84451 0.90516 0.76896 1.17496 1.17940 0.86204 0.85103 0.85019 0.84224 0.86677 0.75148 0.87116 0.85837 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.04 10.56 101.05 1.07 1.11 16 2 O -0.31 -1.06 6.35 -47.59 -0.30 -1.36 16 3 C 0.47 1.22 7.04 36.00 0.25 1.48 16 4 O -0.50 -2.22 15.81 -18.75 -0.30 -2.52 16 5 C 0.17 -0.11 1.11 -132.16 -0.15 -0.25 16 6 N -0.70 1.52 4.76 -47.92 -0.23 1.29 16 7 C 0.51 0.20 7.23 -10.99 -0.08 0.12 16 8 O -0.47 -2.11 13.08 -26.06 -0.34 -2.45 16 9 C 0.05 -0.06 5.22 36.00 0.19 0.13 16 10 O -0.29 -0.75 9.67 -39.36 -0.38 -1.13 16 11 C 0.13 0.31 6.69 -39.22 -0.26 0.05 16 12 C -0.12 -0.37 9.63 -39.43 -0.38 -0.75 16 13 C -0.03 -0.09 5.38 -104.65 -0.56 -0.65 16 14 C -0.07 -0.01 2.79 36.01 0.10 0.09 16 15 O -0.54 -0.29 12.81 -35.23 -0.45 -0.74 16 16 Si 0.69 -0.78 29.85 -169.99 -5.07 -5.86 16 17 C -0.16 -0.35 8.67 -39.56 -0.34 -0.69 16 18 C -0.07 -0.06 10.04 -39.61 -0.40 -0.45 16 19 C -0.21 -0.09 9.04 -39.43 -0.36 -0.45 16 20 C -0.10 0.22 6.42 -25.92 -0.17 0.06 16 21 C 0.07 -0.16 1.36 -89.81 -0.12 -0.28 16 22 O -0.51 1.91 12.79 -35.23 -0.45 1.46 16 23 C 0.44 -0.25 2.85 37.16 0.11 -0.15 16 24 F -0.17 -0.10 17.18 2.25 0.04 -0.06 16 25 F -0.18 0.06 16.65 2.25 0.04 0.09 16 26 F -0.17 -0.13 15.76 2.25 0.04 -0.09 16 27 C -0.15 0.18 6.69 -25.92 -0.17 0.01 16 28 H 0.06 0.09 8.13 -51.93 -0.42 -0.33 16 29 H 0.06 0.04 8.13 -51.93 -0.42 -0.38 16 30 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 31 H 0.41 -2.04 8.48 -40.82 -0.35 -2.39 16 32 H 0.10 -0.36 7.66 -51.93 -0.40 -0.76 16 33 H 0.09 -0.35 7.66 -51.93 -0.40 -0.75 16 34 H 0.14 0.41 8.06 -52.49 -0.42 -0.01 16 35 H 0.08 -0.11 7.96 -51.93 -0.41 -0.52 16 36 H 0.38 -1.78 8.74 45.56 0.40 -1.38 16 37 H -0.25 -0.48 7.05 56.52 0.40 -0.08 16 38 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 39 H 0.12 0.18 4.86 -52.49 -0.26 -0.07 16 40 H 0.13 -0.21 8.06 -52.49 -0.42 -0.63 16 41 H 0.13 -0.34 6.30 -52.48 -0.33 -0.67 16 42 H 0.14 -0.22 7.13 -51.93 -0.37 -0.59 16 43 H 0.11 -0.47 8.11 -51.93 -0.42 -0.89 16 44 H 0.40 -2.46 8.42 45.56 0.38 -2.07 16 45 H 0.11 -0.16 8.14 -51.93 -0.42 -0.58 16 46 H 0.12 -0.09 7.09 -51.93 -0.37 -0.45 16 LS Contribution 400.66 15.07 6.04 6.04 Total: 0.00 -11.94 400.66 -6.90 -18.85 By element: Atomic # 1 Polarization: -8.64 SS G_CDS: -4.26 Total: -12.90 kcal Atomic # 6 Polarization: 0.65 SS G_CDS: -1.27 Total: -0.63 kcal Atomic # 7 Polarization: 1.52 SS G_CDS: -0.23 Total: 1.29 kcal Atomic # 8 Polarization: -4.51 SS G_CDS: -2.22 Total: -6.74 kcal Atomic # 9 Polarization: -0.17 SS G_CDS: 0.11 Total: -0.05 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.07 Total: -5.86 kcal Total LS contribution 6.04 Total: 6.04 kcal Total: -11.94 -6.90 -18.85 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -277.362 kcal (2) G-P(sol) polarization free energy of solvation -11.940 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -289.303 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.905 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.845 kcal (6) G-S(sol) free energy of system = (1) + (5) -296.207 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds