Wall clock time and date at job start Tue Mar 9 2021 14:20:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34231 * 116.99983 * 2 1 4 4 O 1.20822 * 120.00142 * 0.02562 * 3 2 1 5 5 C 1.50698 * 120.00053 * 180.02562 * 3 2 1 6 6 N 1.46504 * 112.85135 * 336.19769 * 5 3 2 7 7 C 1.34783 * 120.00018 * 50.32996 * 6 5 3 8 8 O 1.21282 * 119.99339 * 0.02562 * 7 6 5 9 9 C 1.50693 * 120.00032 * 180.02562 * 7 6 5 10 10 O 1.42903 * 109.46871 * 180.02562 * 9 7 6 11 11 C 1.35907 * 116.99553 * 180.02562 * 10 9 7 12 12 C 1.38713 * 120.05052 * 179.73046 * 11 10 9 13 13 C 1.38166 * 119.94132 * 179.76316 * 12 11 10 14 14 C 1.50700 * 119.97248 * 180.22931 * 13 12 11 15 15 O 1.42899 * 109.47008 * 65.25576 * 14 13 12 16 16 Si 1.86303 * 109.47069 * 185.26027 * 14 13 12 17 17 C 1.38244 * 120.05460 * 0.48608 * 13 12 11 18 18 C 1.38287 * 120.11312 * 359.76790 * 17 13 12 19 19 C 1.38119 * 120.05516 * 359.97438 * 18 17 13 20 20 C 1.53783 * 113.61592 * 205.00183 * 5 3 2 21 21 C 1.53775 * 87.08213 * 220.01675 * 20 5 3 22 22 O 1.42896 * 113.61645 * 270.88302 * 21 20 5 23 23 C 1.53006 * 113.61477 * 140.06306 * 21 20 5 24 24 F 1.39900 * 109.47012 * 60.00146 * 23 21 20 25 25 F 1.39894 * 109.46977 * 179.97438 * 23 21 20 26 26 F 1.39896 * 109.47150 * 300.00069 * 23 21 20 27 27 C 1.53777 * 113.61770 * 107.50499 * 5 3 2 28 28 H 1.09002 * 109.47379 * 59.99613 * 1 2 3 29 29 H 1.09001 * 109.46782 * 299.99696 * 1 2 3 30 30 H 1.09004 * 109.47085 * 179.97438 * 1 2 3 31 31 H 0.97005 * 120.00078 * 230.33850 * 6 5 3 32 32 H 1.09002 * 109.47534 * 300.00680 * 9 7 6 33 33 H 1.09000 * 109.46988 * 60.00342 * 9 7 6 34 34 H 1.07997 * 120.03012 * 359.97438 * 12 11 10 35 35 H 1.08999 * 109.47106 * 305.25822 * 14 13 12 36 36 H 0.96698 * 113.99681 * 180.02562 * 15 14 13 37 37 H 1.48503 * 109.99703 * 299.99533 * 16 14 13 38 38 H 1.48491 * 110.00283 * 61.31574 * 16 14 13 39 39 H 1.07997 * 119.94385 * 179.73683 * 17 13 12 40 40 H 1.08001 * 119.97519 * 179.97438 * 18 17 13 41 41 H 1.08003 * 120.02914 * 179.97438 * 19 18 17 42 42 H 1.08998 * 113.61213 * 334.57142 * 20 5 3 43 43 H 1.09003 * 113.61227 * 105.46869 * 20 5 3 44 44 H 0.96701 * 114.00337 * 180.02562 * 22 21 20 45 45 H 1.08999 * 113.61542 * 254.53224 * 27 5 3 46 46 H 1.08996 * 113.61302 * 25.43051 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 7 4.1993 0.0710 0.5438 7 6 3.8374 -1.1450 0.0890 8 8 2.9879 -1.2425 -0.7711 9 6 4.4881 -2.3834 0.6494 10 8 3.9405 -3.5392 0.0119 11 6 4.4224 -4.7474 0.4057 12 6 3.9314 -5.9113 -0.1674 13 6 4.4265 -7.1382 0.2311 14 6 3.8973 -8.4028 -0.3947 15 8 4.2453 -8.4303 -1.7804 16 14 4.6433 -9.8791 0.4625 17 6 5.4030 -7.2068 1.2072 18 6 5.8903 -6.0482 1.7838 19 6 5.4025 -4.8190 1.3851 20 6 4.1149 2.5823 0.5950 21 6 5.1632 2.5627 -0.5299 22 8 6.3543 1.8501 -0.1900 23 6 5.4464 3.9423 -1.1278 24 9 5.9239 4.7953 -0.1269 25 9 6.4078 3.8246 -2.1373 26 9 4.2670 4.4686 -1.6655 27 6 4.1588 1.7306 -1.3444 28 1 -0.3634 0.5139 -0.8899 29 1 -0.3633 0.5138 0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 4.8789 0.1491 1.2316 32 1 5.5621 -2.3433 0.4679 33 1 4.3027 -2.4375 1.7221 34 1 3.1654 -5.8584 -0.9268 35 1 2.8126 -8.4328 -0.2919 36 1 3.9357 -9.2180 -2.2481 37 1 6.1221 -9.8500 0.3295 38 1 4.2623 -9.8793 1.8977 39 1 5.7856 -8.1670 1.5204 40 1 6.6529 -6.1045 2.5465 41 1 5.7831 -3.9144 1.8360 42 1 3.4186 3.4182 0.5286 43 1 4.5411 2.4632 1.5912 44 1 7.0177 1.8346 -0.8934 45 1 4.6204 0.9241 -1.9141 46 1 3.4746 2.3338 -1.9412 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18364788_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:20:55 Heat of formation + Delta-G solvation = -300.538752 kcal Electronic energy + Delta-G solvation = -40066.967858 eV Core-core repulsion = 34090.426254 eV Total energy + Delta-G solvation = -5976.541604 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 406.121 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -51.31724 -48.86197 -48.78250 -42.74032 -41.47834 -40.66864 -40.05071 -38.84176 -37.64032 -37.28962 -36.51066 -34.36643 -32.66846 -31.80469 -30.22030 -28.88186 -28.44598 -27.61839 -26.79796 -25.56715 -23.79204 -23.10280 -22.45286 -21.67513 -20.79154 -20.25171 -19.64718 -19.53412 -19.20290 -19.05501 -18.41328 -18.28925 -17.94465 -17.64114 -17.52402 -17.34391 -17.15015 -16.81924 -16.39156 -15.95291 -15.81594 -15.63889 -15.50603 -15.29509 -15.22373 -15.16286 -15.03787 -14.95640 -14.87666 -14.76235 -14.60524 -14.52009 -14.33439 -14.16784 -13.89855 -13.79367 -13.65625 -13.55029 -13.22869 -13.07317 -12.84714 -12.41703 -12.31698 -12.24995 -12.13805 -11.94845 -11.86459 -11.80863 -11.44785 -10.92371 -10.43769 -10.37576 -9.98539 -9.38989 -4.91945 0.09855 0.25852 0.75955 1.23247 1.26494 1.34748 1.46263 1.66549 1.68839 1.97313 2.18931 2.36262 2.41075 2.49217 2.53826 2.64592 2.90712 3.20359 3.32266 3.40227 3.46533 3.64997 3.75935 3.82871 3.88750 4.00937 4.03125 4.09608 4.15674 4.17293 4.19279 4.21733 4.22474 4.31044 4.41793 4.45201 4.51756 4.58614 4.60854 4.87542 5.06703 5.10940 5.22090 5.24225 5.32572 5.55179 6.15987 6.20612 6.36769 6.50260 6.88978 7.08095 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.325 6.325 3 C 0.464 3.536 4 O -0.525 6.525 5 C 0.170 3.830 6 N -0.683 5.683 7 C 0.512 3.488 8 O -0.516 6.516 9 C 0.040 3.960 10 O -0.313 6.313 11 C 0.124 3.876 12 C -0.144 4.144 13 C -0.053 4.053 14 C -0.089 4.089 15 O -0.565 6.565 16 Si 0.785 3.215 17 C -0.182 4.182 18 C -0.073 4.073 19 C -0.201 4.201 20 C -0.097 4.097 21 C 0.086 3.914 22 O -0.501 6.501 23 C 0.436 3.564 24 F -0.177 7.177 25 F -0.180 7.180 26 F -0.179 7.179 27 C -0.149 4.149 28 H 0.058 0.942 29 H 0.066 0.934 30 H 0.114 0.886 31 H 0.431 0.569 32 H 0.127 0.873 33 H 0.124 0.876 34 H 0.125 0.875 35 H 0.090 0.910 36 H 0.404 0.596 37 H -0.293 1.293 38 H -0.286 1.286 39 H 0.120 0.880 40 H 0.157 0.843 41 H 0.167 0.833 42 H 0.132 0.868 43 H 0.140 0.860 44 H 0.410 0.590 45 H 0.112 0.888 46 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.442 -4.191 4.048 6.767 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.239 6.239 3 C 0.306 3.694 4 O -0.415 6.415 5 C 0.080 3.920 6 N -0.342 5.342 7 C 0.298 3.702 8 O -0.389 6.389 9 C -0.037 4.037 10 O -0.226 6.226 11 C 0.079 3.921 12 C -0.163 4.163 13 C -0.053 4.053 14 C -0.198 4.198 15 O -0.375 6.375 16 Si 0.690 3.310 17 C -0.200 4.200 18 C -0.091 4.091 19 C -0.219 4.219 20 C -0.134 4.134 21 C 0.042 3.958 22 O -0.311 6.311 23 C 0.381 3.619 24 F -0.158 7.158 25 F -0.162 7.162 26 F -0.161 7.161 27 C -0.188 4.188 28 H 0.077 0.923 29 H 0.084 0.916 30 H 0.132 0.868 31 H 0.272 0.728 32 H 0.144 0.856 33 H 0.141 0.859 34 H 0.143 0.857 35 H 0.108 0.892 36 H 0.255 0.745 37 H -0.220 1.220 38 H -0.213 1.213 39 H 0.137 0.863 40 H 0.175 0.825 41 H 0.185 0.815 42 H 0.150 0.850 43 H 0.158 0.842 44 H 0.263 0.737 45 H 0.131 0.869 46 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 2.938 -3.741 4.580 6.604 hybrid contribution 0.169 1.232 -0.529 1.352 sum 3.107 -2.509 4.051 5.689 Atomic orbital electron populations 1.23462 0.76419 1.04794 1.02276 1.86983 1.23542 1.31336 1.82028 1.23859 0.91723 0.81946 0.71830 1.90698 1.66864 1.37160 1.46750 1.20657 0.84734 0.88186 0.98419 1.45176 1.43358 1.02087 1.43577 1.20424 0.82364 0.84669 0.82732 1.90828 1.30802 1.86311 1.30985 1.22660 1.00062 0.81703 0.99294 1.86119 1.62255 1.12243 1.61979 1.19121 0.93887 0.84676 0.94410 1.20338 1.03543 0.89790 1.02582 1.19471 0.95856 0.94070 0.95876 1.25006 1.04108 1.02655 0.87987 1.86451 1.81412 1.49473 1.20155 0.94256 0.77225 0.82059 0.77495 1.21036 0.99501 0.99221 1.00208 1.21239 0.98428 0.90950 0.98441 1.21618 0.99690 1.00560 1.00059 1.23515 0.94436 0.95029 1.00452 1.23008 0.88629 0.85849 0.98320 1.86540 1.26154 1.73003 1.45372 1.21213 0.74332 0.89697 0.76636 1.93231 1.88412 1.73533 1.60650 1.93201 1.64676 1.96145 1.62168 1.93215 1.47818 1.88302 1.86754 1.24150 0.97826 1.00992 0.95865 0.92333 0.91562 0.86775 0.72847 0.85574 0.85862 0.85686 0.89217 0.74525 1.22036 1.21325 0.86251 0.82529 0.81514 0.85023 0.84230 0.73674 0.86918 0.86847 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.10 10.56 113.37 1.20 1.30 16 2 O -0.32 -2.62 6.35 -43.46 -0.28 -2.89 16 3 C 0.46 2.89 7.04 71.24 0.50 3.40 16 4 O -0.53 -5.46 15.81 21.98 0.35 -5.11 16 5 C 0.17 -0.23 1.11 3.38 0.00 -0.23 16 6 N -0.68 3.77 4.76 -423.92 -2.02 1.75 16 7 C 0.51 0.14 7.23 87.65 0.63 0.77 16 8 O -0.52 -5.15 13.08 27.19 0.36 -4.79 16 9 C 0.04 -0.18 5.22 71.23 0.37 0.20 16 10 O -0.31 -1.68 9.67 -73.47 -0.71 -2.39 16 11 C 0.12 0.61 6.69 22.51 0.15 0.76 16 12 C -0.14 -1.12 9.63 22.37 0.22 -0.91 16 13 C -0.05 -0.33 5.38 -19.88 -0.11 -0.44 16 14 C -0.09 -0.10 2.79 71.24 0.20 0.09 16 15 O -0.56 -1.03 12.81 -148.98 -1.91 -2.94 16 16 Si 0.78 -1.46 29.85 68.60 2.05 0.59 16 17 C -0.18 -0.86 8.67 22.28 0.19 -0.67 16 18 C -0.07 -0.04 10.04 22.25 0.22 0.19 16 19 C -0.20 0.14 9.04 22.36 0.20 0.34 16 20 C -0.10 0.50 6.42 31.12 0.20 0.70 16 21 C 0.09 -0.46 1.36 -10.27 -0.01 -0.48 16 22 O -0.50 4.77 12.79 -148.98 -1.90 2.87 16 23 C 0.44 -0.59 2.85 71.98 0.21 -0.38 16 24 F -0.18 -0.12 17.18 44.97 0.77 0.66 16 25 F -0.18 0.17 16.65 44.97 0.75 0.92 16 26 F -0.18 -0.39 15.76 44.97 0.71 0.32 16 27 C -0.15 0.33 6.69 31.12 0.21 0.54 16 28 H 0.06 0.29 8.13 -2.39 -0.02 0.27 16 29 H 0.07 0.18 8.13 -2.39 -0.02 0.16 16 30 H 0.11 0.12 8.14 -2.38 -0.02 0.10 16 31 H 0.43 -5.33 8.48 -92.70 -0.79 -6.12 16 32 H 0.13 -1.33 7.66 -2.39 -0.02 -1.35 16 33 H 0.12 -1.26 7.66 -2.39 -0.02 -1.28 16 34 H 0.13 1.10 8.06 -2.91 -0.02 1.08 16 35 H 0.09 -0.19 7.96 -2.39 -0.02 -0.21 16 36 H 0.40 -3.68 8.74 -74.06 -0.65 -4.33 16 37 H -0.29 -1.46 7.05 99.48 0.70 -0.76 16 38 H -0.29 -0.89 7.11 99.48 0.71 -0.18 16 39 H 0.12 0.46 4.86 -2.91 -0.01 0.44 16 40 H 0.16 -0.84 8.06 -2.91 -0.02 -0.86 16 41 H 0.17 -1.46 6.30 -2.91 -0.02 -1.47 16 42 H 0.13 -0.38 7.13 -2.39 -0.02 -0.40 16 43 H 0.14 -1.43 8.11 -2.39 -0.02 -1.45 16 44 H 0.41 -5.86 8.42 -74.06 -0.62 -6.49 16 45 H 0.11 -0.30 8.14 -2.39 -0.02 -0.32 16 46 H 0.11 0.00 7.09 -2.39 -0.02 -0.02 16 Total: 0.00 -30.64 400.66 1.63 -29.01 By element: Atomic # 1 Polarization: -22.26 SS G_CDS: -0.91 Total: -23.17 kcal Atomic # 6 Polarization: 0.80 SS G_CDS: 4.38 Total: 5.18 kcal Atomic # 7 Polarization: 3.77 SS G_CDS: -2.02 Total: 1.75 kcal Atomic # 8 Polarization: -11.16 SS G_CDS: -4.10 Total: -15.25 kcal Atomic # 9 Polarization: -0.34 SS G_CDS: 2.23 Total: 1.89 kcal Atomic # 14 Polarization: -1.46 SS G_CDS: 2.05 Total: 0.59 kcal Total: -30.64 1.63 -29.01 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -271.532 kcal (2) G-P(sol) polarization free energy of solvation -30.637 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -302.169 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.630 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.007 kcal (6) G-S(sol) free energy of system = (1) + (5) -300.539 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds