Wall clock time and date at job start Tue Mar 9 2021 14:21:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34223 * 117.00098 * 2 1 4 4 O 1.20820 * 120.00330 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99937 * 179.97438 * 3 2 1 6 6 N 1.46505 * 112.85201 * 324.47364 * 5 3 2 7 7 C 1.34777 * 119.99788 * 294.08270 * 6 5 3 8 8 O 1.21279 * 119.99915 * 355.00263 * 7 6 5 9 9 C 1.50697 * 119.99743 * 175.00706 * 7 6 5 10 10 N 1.46507 * 109.46776 * 179.97438 * 9 7 6 11 11 C 1.36831 * 125.05998 * 265.03352 * 10 9 7 12 12 C 1.34240 * 109.93295 * 179.97438 * 11 10 9 13 13 C 1.50704 * 126.49478 * 179.97438 * 12 11 10 14 14 O 1.42891 * 109.46971 * 105.03087 * 13 12 11 15 15 Si 1.86298 * 109.47149 * 345.02733 * 13 12 11 16 16 C 1.46490 * 107.00327 * 0.02562 * 12 11 10 17 17 C 1.39588 * 134.03389 * 179.97438 * 16 12 11 18 18 C 1.36659 * 119.76259 * 180.02562 * 17 16 12 19 19 C 1.38787 * 120.52870 * 0.02562 * 18 17 16 20 20 C 1.37791 * 120.66601 * 359.97218 * 19 18 17 21 21 C 1.37694 * 125.05862 * 85.00239 * 10 9 7 22 22 C 1.53786 * 113.61697 * 193.27256 * 5 3 2 23 23 C 1.53779 * 87.08307 * 219.93936 * 22 5 3 24 24 O 1.42897 * 113.61334 * 270.80043 * 23 22 5 25 25 C 1.52996 * 113.61673 * 139.98295 * 23 22 5 26 26 F 1.39903 * 109.47255 * 59.99517 * 25 23 22 27 27 F 1.39892 * 109.47445 * 179.97438 * 25 23 22 28 28 F 1.39899 * 109.46997 * 300.00077 * 25 23 22 29 29 C 1.53781 * 113.68744 * 95.74126 * 5 3 2 30 30 H 1.08996 * 109.47232 * 179.97438 * 1 2 3 31 31 H 1.09002 * 109.47137 * 299.99837 * 1 2 3 32 32 H 1.09006 * 109.47139 * 59.99646 * 1 2 3 33 33 H 0.96999 * 120.00178 * 114.07933 * 6 5 3 34 34 H 1.08996 * 109.47539 * 59.99759 * 9 7 6 35 35 H 1.08998 * 109.46652 * 299.99561 * 9 7 6 36 36 H 1.07997 * 125.03401 * 359.97330 * 11 10 9 37 37 H 1.08998 * 109.46685 * 225.02751 * 13 12 11 38 38 H 0.96698 * 114.00202 * 180.02562 * 14 13 12 39 39 H 1.48498 * 109.99865 * 60.00417 * 15 13 12 40 40 H 1.48504 * 109.99534 * 181.31734 * 15 13 12 41 41 H 1.08001 * 120.11916 * 0.03884 * 17 16 12 42 42 H 1.07999 * 119.73560 * 180.28030 * 18 17 16 43 43 H 1.08003 * 119.66937 * 179.97438 * 19 18 17 44 44 H 1.08001 * 120.10826 * 180.02562 * 20 19 18 45 45 H 1.08995 * 113.61144 * 334.48801 * 22 5 3 46 46 H 1.09000 * 113.61114 * 105.39062 * 22 5 3 47 47 H 0.96698 * 114.00523 * 179.97438 * 24 23 22 48 48 H 1.09000 * 113.61264 * 254.54026 * 29 5 3 49 49 H 1.08992 * 113.61614 * 25.44024 * 29 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2748 0.0006 6 7 4.1917 0.2074 0.7855 7 6 4.0161 0.1618 2.1210 8 8 3.4170 1.0530 2.6847 9 6 4.5642 -0.9966 2.9139 10 7 4.2445 -0.8127 4.3317 11 6 5.0765 -0.2449 5.2579 12 6 4.4796 -0.2284 6.4601 13 6 5.0602 0.3115 7.7418 14 8 4.4485 1.5653 8.0507 15 14 6.8969 0.5496 7.5396 16 6 3.1574 -0.8358 6.2904 17 6 2.0922 -1.0984 7.1535 18 6 0.9607 -1.6949 6.6726 19 6 0.8619 -2.0425 5.3326 20 6 1.9013 -1.7924 4.4633 21 6 3.0618 -1.1849 4.9306 22 6 4.1097 2.6766 0.3240 23 6 5.1721 2.4290 -0.7599 24 8 6.3583 1.8034 -0.2664 25 6 5.4638 3.6573 -1.6241 26 9 5.9292 4.6981 -0.8133 27 9 6.4377 3.3372 -2.5760 28 9 4.2916 4.0602 -2.2728 29 6 4.1765 1.4475 -1.4004 30 1 -0.3633 -1.0276 -0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3634 0.5139 -0.8900 33 1 4.7320 -0.4664 0.3441 34 1 5.6459 -1.0431 2.7888 35 1 4.1170 -1.9246 2.5576 36 1 6.0667 0.1339 5.0520 37 1 4.8722 -0.3938 8.5512 38 1 4.7751 1.9723 8.8649 39 1 7.1665 1.5091 6.4389 40 1 7.4863 1.0516 8.8068 41 1 2.1620 -0.8309 8.1975 42 1 0.1350 -1.8938 7.3398 43 1 -0.0387 -2.5137 4.9675 44 1 1.8147 -2.0663 3.4222 45 1 3.4158 3.4808 0.0797 46 1 4.5231 2.7635 1.3288 47 1 7.0301 1.6446 -0.9435 48 1 4.6438 0.5421 -1.7877 49 1 3.5009 1.9157 -2.1162 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_18364788_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:21:44 Heat of formation + Delta-G solvation = -231.204909 kcal Electronic energy + Delta-G solvation = -44596.898991 eV Core-core repulsion = 38464.630309 eV Total energy + Delta-G solvation = -6132.268682 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 429.132 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -51.34639 -48.87797 -48.82619 -42.85205 -42.39910 -40.84430 -39.97072 -38.09773 -37.76418 -37.73497 -36.61625 -34.59649 -33.99734 -31.48927 -30.29504 -30.01786 -28.89970 -28.44094 -27.62255 -25.97900 -25.41915 -23.81224 -23.00299 -22.54637 -21.91445 -20.89498 -20.54633 -20.28187 -19.65775 -19.57735 -19.08773 -18.65174 -18.49328 -18.20085 -17.94451 -17.66093 -17.54002 -17.19517 -16.45366 -16.40266 -16.32855 -15.87756 -15.85535 -15.68902 -15.63683 -15.25418 -15.21039 -15.07916 -14.98606 -14.95172 -14.92490 -14.79119 -14.72555 -14.52189 -14.46932 -14.18344 -14.12012 -13.77700 -13.68616 -13.52375 -13.30976 -13.20948 -12.79008 -12.72680 -12.58032 -12.52062 -12.42855 -12.10289 -11.97908 -11.91553 -11.71792 -11.59957 -11.23602 -10.55610 -10.49754 -10.35324 -9.15371 -8.63386 -4.91506 0.14129 0.62399 0.75032 1.14924 1.26704 1.34179 1.35956 1.61207 1.63528 1.69276 1.93039 1.99025 2.19202 2.40738 2.44401 2.62716 2.88581 2.93387 3.17367 3.31561 3.41142 3.56075 3.63679 3.73584 3.80440 3.84677 4.02400 4.04175 4.15959 4.16070 4.17624 4.18937 4.23212 4.28309 4.31061 4.40858 4.44077 4.52051 4.57527 4.59578 4.71625 4.79500 4.90400 5.03914 5.12768 5.14716 5.51544 5.66397 5.73315 5.75788 6.13114 6.22189 6.28593 6.35879 6.43026 6.66696 6.99194 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.347 6.347 3 C 0.467 3.533 4 O -0.527 6.527 5 C 0.172 3.828 6 N -0.672 5.672 7 C 0.495 3.505 8 O -0.562 6.562 9 C 0.093 3.907 10 N -0.466 5.466 11 C 0.075 3.925 12 C -0.182 4.182 13 C -0.059 4.059 14 O -0.566 6.566 15 Si 0.782 3.218 16 C -0.118 4.118 17 C -0.089 4.089 18 C -0.154 4.154 19 C -0.107 4.107 20 C -0.132 4.132 21 C 0.093 3.907 22 C -0.114 4.114 23 C 0.086 3.914 24 O -0.502 6.502 25 C 0.435 3.565 26 F -0.186 7.186 27 F -0.173 7.173 28 F -0.179 7.179 29 C -0.125 4.125 30 H 0.137 0.863 31 H 0.047 0.953 32 H 0.067 0.933 33 H 0.435 0.565 34 H 0.171 0.829 35 H 0.154 0.846 36 H 0.193 0.807 37 H 0.079 0.921 38 H 0.389 0.611 39 H -0.291 1.291 40 H -0.286 1.286 41 H 0.119 0.881 42 H 0.137 0.863 43 H 0.147 0.853 44 H 0.135 0.865 45 H 0.112 0.888 46 H 0.090 0.910 47 H 0.411 0.589 48 H 0.159 0.841 49 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.770 -10.905 -5.519 13.516 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.262 6.262 3 C 0.309 3.691 4 O -0.414 6.414 5 C 0.082 3.918 6 N -0.330 5.330 7 C 0.282 3.718 8 O -0.439 6.439 9 C -0.031 4.031 10 N -0.148 5.148 11 C -0.050 4.050 12 C -0.189 4.189 13 C -0.166 4.166 14 O -0.375 6.375 15 Si 0.686 3.314 16 C -0.122 4.122 17 C -0.107 4.107 18 C -0.173 4.173 19 C -0.126 4.126 20 C -0.152 4.152 21 C -0.012 4.012 22 C -0.153 4.153 23 C 0.042 3.958 24 O -0.312 6.312 25 C 0.380 3.620 26 F -0.168 7.168 27 F -0.154 7.154 28 F -0.160 7.160 29 C -0.163 4.163 30 H 0.155 0.845 31 H 0.066 0.934 32 H 0.086 0.914 33 H 0.277 0.723 34 H 0.188 0.812 35 H 0.171 0.829 36 H 0.210 0.790 37 H 0.097 0.903 38 H 0.238 0.762 39 H -0.219 1.219 40 H -0.213 1.213 41 H 0.137 0.863 42 H 0.155 0.845 43 H 0.165 0.835 44 H 0.153 0.847 45 H 0.130 0.870 46 H 0.109 0.891 47 H 0.265 0.735 48 H 0.177 0.823 49 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 5.238 -9.579 -5.441 12.198 hybrid contribution -0.711 1.706 0.243 1.864 sum 4.527 -7.873 -5.197 10.464 Atomic orbital electron populations 1.23562 0.74857 1.05954 1.02156 1.86472 1.24701 1.31972 1.83104 1.23960 0.91929 0.81771 0.71489 1.90704 1.67088 1.37658 1.45993 1.20626 0.84199 0.90552 0.96460 1.45179 1.52693 1.29265 1.05839 1.21726 0.79294 0.88173 0.82656 1.90863 1.42363 1.39963 1.70684 1.21997 1.06603 0.97417 0.77132 1.43379 1.12331 1.51744 1.07379 1.21909 0.97357 0.98378 0.87368 1.19754 0.95059 1.09124 0.94959 1.24485 1.09940 0.86351 0.95845 1.86627 1.66397 1.36399 1.48076 0.94288 0.72110 0.87070 0.77945 1.19365 0.95609 1.03697 0.93527 1.20443 0.92616 0.98388 0.99261 1.20921 0.98294 1.01482 0.96566 1.21139 0.98616 0.99750 0.93123 1.20250 0.91475 1.02865 1.00615 1.18392 0.88975 1.01751 0.92104 1.23400 0.95101 0.96441 1.00345 1.23005 0.88796 0.89326 0.94679 1.86654 1.26080 1.79085 1.39347 1.21257 0.74498 0.86466 0.79758 1.93222 1.88910 1.61656 1.72993 1.93209 1.63577 1.92451 1.66205 1.93208 1.48363 1.91826 1.82603 1.24080 0.96784 1.02588 0.92815 0.84509 0.93435 0.91378 0.72349 0.81175 0.82881 0.79008 0.90283 0.76152 1.21858 1.21300 0.86253 0.84515 0.83546 0.84718 0.86979 0.89088 0.73455 0.82294 0.85541 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 113.37 1.20 1.18 16 2 O -0.35 -0.70 10.41 -51.35 -0.53 -1.24 16 3 C 0.47 2.58 6.59 71.24 0.47 3.05 16 4 O -0.53 -6.93 15.66 21.98 0.34 -6.59 16 5 C 0.17 -0.27 1.00 3.39 0.00 -0.27 16 6 N -0.67 4.70 4.54 -423.91 -1.92 2.77 16 7 C 0.50 -0.18 7.45 87.66 0.65 0.47 16 8 O -0.56 -7.00 14.96 -3.03 -0.05 -7.05 16 9 C 0.09 -0.68 6.48 85.63 0.56 -0.12 16 10 N -0.47 -1.23 2.27 -519.99 -1.18 -2.41 16 11 C 0.08 0.29 9.89 83.00 0.82 1.11 16 12 C -0.18 -1.49 5.61 -18.62 -0.10 -1.59 16 13 C -0.06 -0.28 3.05 71.24 0.22 -0.06 16 14 O -0.57 -5.12 12.86 -148.98 -1.92 -7.03 16 15 Si 0.78 -0.40 30.79 68.60 2.11 1.71 16 16 C -0.12 -1.32 6.35 -20.20 -0.13 -1.45 16 17 C -0.09 -0.89 10.05 22.23 0.22 -0.66 16 18 C -0.15 -1.04 9.97 22.03 0.22 -0.82 16 19 C -0.11 -0.52 10.01 22.30 0.22 -0.29 16 20 C -0.13 -0.69 10.00 22.36 0.22 -0.47 16 21 C 0.09 0.74 6.80 39.03 0.27 1.00 16 22 C -0.11 -0.32 5.98 31.12 0.19 -0.14 16 23 C 0.09 -0.41 1.36 -10.27 -0.01 -0.42 16 24 O -0.50 4.56 12.92 -148.98 -1.92 2.63 16 25 C 0.43 -0.31 2.85 71.98 0.21 -0.10 16 26 F -0.19 -0.86 17.18 44.97 0.77 -0.09 16 27 F -0.17 0.50 16.65 44.97 0.75 1.25 16 28 F -0.18 -0.35 15.75 44.97 0.71 0.36 16 29 C -0.13 1.10 6.63 31.12 0.21 1.31 16 30 H 0.14 -1.00 8.14 -2.39 -0.02 -1.02 16 31 H 0.05 0.17 8.13 -2.39 -0.02 0.15 16 32 H 0.07 -0.05 8.13 -2.38 -0.02 -0.07 16 33 H 0.43 -7.09 8.66 -92.71 -0.80 -7.89 16 34 H 0.17 -2.75 8.12 -2.39 -0.02 -2.77 16 35 H 0.15 -2.05 8.14 -2.39 -0.02 -2.07 16 36 H 0.19 -0.43 6.30 -2.91 -0.02 -0.45 16 37 H 0.08 0.15 7.96 -2.39 -0.02 0.13 16 38 H 0.39 0.05 8.74 -74.06 -0.65 -0.60 16 39 H -0.29 -1.58 7.04 99.48 0.70 -0.88 16 40 H -0.29 -1.01 7.11 99.48 0.71 -0.30 16 41 H 0.12 1.00 8.06 -2.91 -0.02 0.97 16 42 H 0.14 0.33 8.06 -2.91 -0.02 0.31 16 43 H 0.15 -0.10 8.06 -2.91 -0.02 -0.13 16 44 H 0.13 0.02 8.06 -2.91 -0.02 -0.01 16 45 H 0.11 0.72 7.09 -2.39 -0.02 0.70 16 46 H 0.09 0.69 7.20 -2.39 -0.02 0.67 16 47 H 0.41 -6.93 8.42 -74.06 -0.62 -7.56 16 48 H 0.16 -2.79 8.09 -2.39 -0.02 -2.81 16 49 H 0.13 -0.97 7.09 -2.39 -0.02 -0.98 16 Total: 0.00 -40.18 431.22 1.62 -38.56 By element: Atomic # 1 Polarization: -23.64 SS G_CDS: -0.97 Total: -24.61 kcal Atomic # 6 Polarization: -3.70 SS G_CDS: 5.42 Total: 1.72 kcal Atomic # 7 Polarization: 3.47 SS G_CDS: -3.10 Total: 0.37 kcal Atomic # 8 Polarization: -15.20 SS G_CDS: -4.08 Total: -19.28 kcal Atomic # 9 Polarization: -0.71 SS G_CDS: 2.23 Total: 1.52 kcal Atomic # 14 Polarization: -0.40 SS G_CDS: 2.11 Total: 1.71 kcal Total: -40.18 1.62 -38.56 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_18364788_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -192.642 kcal (2) G-P(sol) polarization free energy of solvation -40.183 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -232.825 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.621 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.563 kcal (6) G-S(sol) free energy of system = (1) + (5) -231.205 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds