Wall clock time and date at job start Tue Mar 9 2021 14:32:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 O 1.42898 * 109.46995 * 2 1 4 4 C 1.35898 * 117.00488 * 275.32357 * 3 2 1 5 5 C 1.38735 * 120.05559 * 5.08610 * 4 3 2 6 6 C 1.38140 * 119.94436 * 179.69891 * 5 4 3 7 7 C 1.38268 * 120.05501 * 0.59721 * 6 5 4 8 8 C 1.50699 * 119.93959 * 179.69946 * 7 6 5 9 9 O 1.42905 * 109.46960 * 119.97801 * 8 7 6 10 10 Si 1.86298 * 109.47588 * 359.97438 * 8 7 6 11 11 C 1.38259 * 120.11345 * 359.67622 * 7 6 5 12 12 C 1.38152 * 120.05461 * 0.02714 * 11 7 6 13 13 C 1.50697 * 109.47166 * 120.00093 * 2 1 3 14 14 O 1.21278 * 120.00092 * 244.99786 * 13 2 1 15 15 N 1.34776 * 119.99990 * 65.00163 * 13 2 1 16 16 C 1.46497 * 120.00162 * 180.02562 * 15 13 2 17 17 H 1.08998 * 109.46856 * 324.99794 * 16 15 13 18 18 C 1.53000 * 109.47231 * 84.99767 * 16 15 13 19 19 C 1.53003 * 109.46979 * 180.02562 * 18 16 15 20 20 C 1.52999 * 109.47129 * 299.99736 * 19 18 16 21 21 H 1.09003 * 109.47237 * 300.00556 * 20 19 18 22 22 C 1.52993 * 109.47226 * 180.02562 * 20 19 18 23 23 C 1.53009 * 109.46859 * 60.00405 * 20 19 18 24 24 C 1.52999 * 109.47052 * 205.00038 * 16 15 13 25 25 H 1.09002 * 109.47172 * 59.99520 * 1 2 3 26 26 H 1.09003 * 109.47389 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.47421 * 300.00097 * 1 2 3 28 28 H 1.08999 * 109.47167 * 240.00632 * 2 1 3 29 29 H 1.07997 * 120.02224 * 359.97438 * 5 4 3 30 30 H 1.08002 * 119.97058 * 180.32061 * 6 5 4 31 31 H 1.09004 * 109.47134 * 239.97501 * 8 7 6 32 32 H 0.96699 * 113.99921 * 179.97438 * 9 8 7 33 33 H 1.48496 * 110.00129 * 59.99919 * 10 8 7 34 34 H 1.48502 * 110.00093 * 181.32105 * 10 8 7 35 35 H 1.08001 * 119.97615 * 179.97438 * 11 7 6 36 36 H 1.07994 * 120.02235 * 180.02562 * 12 11 7 37 37 H 0.97004 * 119.99975 * 359.97438 * 15 13 2 38 38 H 1.09003 * 109.46897 * 59.99872 * 18 16 15 39 39 H 1.08996 * 109.47002 * 300.00155 * 18 16 15 40 40 H 1.08996 * 109.46615 * 180.02562 * 19 18 16 41 41 H 1.08998 * 109.47087 * 60.00039 * 19 18 16 42 42 H 1.08996 * 109.47301 * 60.00562 * 22 20 19 43 43 H 1.09006 * 109.47333 * 180.02562 * 22 20 19 44 44 H 1.09003 * 109.47418 * 300.00386 * 22 20 19 45 45 H 1.08998 * 109.47355 * 59.99699 * 23 20 19 46 46 H 1.09005 * 109.47091 * 180.02562 * 23 20 19 47 47 H 1.08999 * 109.47360 * 59.99630 * 24 16 15 48 48 H 1.08998 * 109.47091 * 299.99613 * 24 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0062 1.3473 0.0000 4 6 2.1060 1.9665 -1.2056 5 6 1.6544 1.3305 -2.3529 6 6 1.7512 1.9646 -3.5763 7 6 2.3089 3.2270 -3.6598 8 6 2.4195 3.9136 -4.9967 9 8 1.6854 5.1393 -4.9649 10 14 1.7223 2.8065 -6.3230 11 6 2.7650 3.8607 -2.5187 12 6 2.6648 3.2333 -1.2919 13 6 2.0323 -0.7104 1.2304 14 8 2.6529 -0.0980 2.0733 15 7 1.7919 -2.0264 1.3941 16 6 2.2797 -2.7170 2.5905 17 1 3.2397 -2.2948 2.8875 18 6 1.2714 -2.5410 3.7277 19 6 1.7813 -3.2616 4.9774 20 6 1.9519 -4.7513 4.6731 21 1 0.9919 -5.1738 4.3762 22 6 2.4611 -5.4721 5.9228 23 6 2.9602 -4.9273 3.5358 24 6 2.4499 -4.2066 2.2857 25 1 -0.3633 0.5139 -0.8899 26 1 -0.3634 -1.0277 -0.0005 27 1 -0.3634 0.5138 0.8900 28 1 1.8933 -0.5137 -0.8900 29 1 1.2234 0.3423 -2.2888 30 1 1.3950 1.4720 -4.4690 31 1 3.4673 4.1231 -5.2121 32 1 1.7129 5.6358 -5.7942 33 1 0.2941 2.5133 -6.0410 34 1 1.8544 3.4589 -7.6505 35 1 3.2006 4.8466 -2.5865 36 1 3.0208 3.7290 -0.4009 37 1 1.2952 -2.5162 0.7200 38 1 0.3114 -2.9631 3.4306 39 1 1.1502 -1.4797 3.9448 40 1 1.0627 -3.1366 5.7874 41 1 2.7412 -2.8391 5.2742 42 1 1.7425 -5.3468 6.7327 43 1 2.5831 -6.5334 5.7059 44 1 3.4210 -5.0497 6.2202 45 1 3.9202 -4.5048 3.8327 46 1 3.0815 -5.9886 3.3187 47 1 3.1682 -4.3320 1.4755 48 1 1.4899 -4.6287 1.9887 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_4279154_10157680.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:32:56 Heat of formation + Delta-G solvation = -89.671029 kcal Electronic energy + Delta-G solvation = -26916.564746 eV Core-core repulsion = 23130.726458 eV Total energy + Delta-G solvation = -3785.838288 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.182 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -41.85215 -40.88960 -39.57504 -38.81307 -37.35525 -35.81018 -33.67828 -32.19405 -31.82481 -31.75855 -31.29639 -27.17888 -26.59768 -25.20315 -24.11466 -23.74764 -22.55688 -21.98142 -21.42326 -20.67353 -19.51459 -18.65386 -18.45845 -17.43434 -16.97105 -16.78248 -16.74366 -15.99798 -15.78760 -15.77113 -15.37652 -15.21179 -15.19060 -14.96753 -14.58494 -14.31202 -14.24920 -14.01346 -13.80088 -13.66687 -13.45982 -13.36441 -13.21907 -13.14460 -12.91460 -12.54873 -12.46101 -12.13115 -12.09421 -11.95397 -11.91421 -11.72628 -11.63708 -11.29446 -11.13204 -10.84285 -10.48014 -10.15501 -10.05231 -9.22240 -4.91753 0.25108 0.28821 1.32336 1.41105 1.49739 1.62116 1.96644 2.48881 2.60089 3.40032 3.43656 3.64265 3.67619 3.72150 3.79050 3.81901 3.84296 3.92490 3.97258 4.09585 4.18381 4.26886 4.34811 4.39742 4.42890 4.44122 4.53429 4.57006 4.58543 4.61353 4.70071 4.76733 4.79958 4.94994 4.95593 4.99878 5.07213 5.09677 5.13533 5.17090 5.18809 5.23116 5.23334 5.33691 5.40656 5.44521 5.48775 5.56468 5.67950 6.25545 6.46459 6.60225 7.11161 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C 0.063 3.937 3 O -0.314 6.314 4 C 0.120 3.880 5 C -0.201 4.201 6 C -0.076 4.076 7 C -0.124 4.124 8 C -0.086 4.086 9 O -0.561 6.561 10 Si 0.768 3.232 11 C -0.060 4.060 12 C -0.167 4.167 13 C 0.516 3.484 14 O -0.571 6.571 15 N -0.704 5.704 16 C 0.147 3.853 17 H 0.060 0.940 18 C -0.124 4.124 19 C -0.112 4.112 20 C -0.090 4.090 21 H 0.080 0.920 22 C -0.150 4.150 23 C -0.112 4.112 24 C -0.117 4.117 25 H 0.085 0.915 26 H 0.112 0.888 27 H 0.055 0.945 28 H 0.132 0.868 29 H 0.164 0.836 30 H 0.153 0.847 31 H 0.092 0.908 32 H 0.394 0.606 33 H -0.294 1.294 34 H -0.289 1.289 35 H 0.135 0.865 36 H 0.127 0.873 37 H 0.420 0.580 38 H 0.080 0.920 39 H 0.040 0.960 40 H 0.065 0.935 41 H 0.051 0.949 42 H 0.054 0.946 43 H 0.061 0.939 44 H 0.049 0.951 45 H 0.055 0.945 46 H 0.080 0.920 47 H 0.078 0.922 48 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.296 -7.936 -5.087 9.515 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.230 4.230 2 C 0.004 3.996 3 O -0.227 6.227 4 C 0.075 3.925 5 C -0.220 4.220 6 C -0.093 4.093 7 C -0.124 4.124 8 C -0.194 4.194 9 O -0.370 6.370 10 Si 0.673 3.327 11 C -0.079 4.079 12 C -0.186 4.186 13 C 0.302 3.698 14 O -0.449 6.449 15 N -0.357 5.357 16 C 0.043 3.957 17 H 0.078 0.922 18 C -0.163 4.163 19 C -0.150 4.150 20 C -0.109 4.109 21 H 0.098 0.902 22 C -0.207 4.207 23 C -0.150 4.150 24 C -0.155 4.155 25 H 0.104 0.896 26 H 0.130 0.870 27 H 0.074 0.926 28 H 0.149 0.851 29 H 0.182 0.818 30 H 0.170 0.830 31 H 0.110 0.890 32 H 0.244 0.756 33 H -0.222 1.222 34 H -0.216 1.216 35 H 0.153 0.847 36 H 0.145 0.855 37 H 0.258 0.742 38 H 0.099 0.901 39 H 0.059 0.941 40 H 0.084 0.916 41 H 0.070 0.930 42 H 0.073 0.927 43 H 0.080 0.920 44 H 0.068 0.932 45 H 0.074 0.926 46 H 0.099 0.901 47 H 0.096 0.904 48 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -1.502 -7.716 -4.308 8.964 hybrid contribution -0.280 1.577 -0.111 1.606 sum -1.782 -6.139 -4.419 7.771 Atomic orbital electron populations 1.22370 0.90660 1.05784 1.04181 1.22454 0.97065 0.82072 0.98014 1.86195 1.81435 1.27156 1.27941 1.19227 0.95835 0.92976 0.84442 1.21469 1.06344 1.02810 0.91330 1.21015 0.96390 0.93966 0.97934 1.19455 1.02741 0.95590 0.94617 1.25042 1.00592 0.91678 1.02071 1.86551 1.74852 1.34501 1.41144 0.94220 0.80194 0.85188 0.73056 1.20921 0.96864 0.99337 0.90732 1.20625 1.04463 0.94436 0.99091 1.20551 0.79009 0.82930 0.87358 1.90748 1.41633 1.66941 1.45593 1.45814 1.57555 1.07964 1.24382 1.21010 0.97059 0.93273 0.84400 0.92158 1.21861 0.99463 0.99698 0.95289 1.21552 1.01024 0.95456 0.96982 1.21158 0.99678 0.94510 0.95513 0.90198 1.21840 1.00979 1.00546 0.97373 1.21572 0.98362 1.01083 0.93978 1.21774 1.03414 0.91515 0.98787 0.89603 0.86964 0.92560 0.85068 0.81833 0.82992 0.89004 0.75585 1.22185 1.21644 0.84749 0.85505 0.74207 0.90129 0.94136 0.91592 0.93016 0.92725 0.91967 0.93206 0.92576 0.90129 0.90378 0.89240 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.82 9.12 71.98 0.66 1.47 16 2 C 0.06 0.00 2.64 29.85 0.08 0.07 16 3 O -0.31 -2.66 9.34 -73.41 -0.69 -3.34 16 4 C 0.12 0.72 6.60 22.51 0.15 0.87 16 5 C -0.20 0.00 8.24 22.37 0.18 0.18 16 6 C -0.08 0.00 8.66 22.25 0.19 0.19 16 7 C -0.12 -0.38 5.42 -19.85 -0.11 -0.49 16 8 C -0.09 0.02 2.81 71.24 0.20 0.22 16 9 O -0.56 -1.64 12.74 -148.98 -1.90 -3.54 16 10 Si 0.77 -2.21 29.78 68.60 2.04 -0.17 16 11 C -0.06 -0.33 9.60 22.25 0.21 -0.11 16 12 C -0.17 -1.23 9.99 22.37 0.22 -1.01 16 13 C 0.52 2.48 7.14 87.66 0.63 3.10 16 14 O -0.57 -9.42 16.17 15.97 0.26 -9.16 16 15 N -0.70 2.08 5.04 -442.55 -2.23 -0.15 16 16 C 0.15 -0.09 2.45 44.99 0.11 0.02 16 17 H 0.06 0.35 7.58 -2.39 -0.02 0.34 16 18 C -0.12 -0.05 5.49 30.60 0.17 0.11 16 19 C -0.11 0.01 5.20 30.59 0.16 0.17 16 20 C -0.09 0.29 2.72 -10.79 -0.03 0.26 16 21 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 22 C -0.15 0.37 9.19 71.98 0.66 1.04 16 23 C -0.11 0.48 5.21 30.61 0.16 0.64 16 24 C -0.12 0.71 5.40 30.61 0.17 0.87 16 25 H 0.09 -0.48 6.91 -2.39 -0.02 -0.50 16 26 H 0.11 -1.30 7.92 -2.39 -0.02 -1.31 16 27 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 28 H 0.13 -0.91 6.31 -2.39 -0.02 -0.93 16 29 H 0.16 -1.16 5.43 -2.91 -0.02 -1.18 16 30 H 0.15 -0.80 4.87 -2.91 -0.01 -0.82 16 31 H 0.09 -0.35 7.96 -2.38 -0.02 -0.36 16 32 H 0.39 -2.03 8.74 -74.06 -0.65 -2.68 16 33 H -0.29 -1.09 7.11 99.48 0.71 -0.38 16 34 H -0.29 -0.47 7.11 99.48 0.71 0.24 16 35 H 0.13 0.50 8.06 -2.91 -0.02 0.48 16 36 H 0.13 0.96 8.06 -2.91 -0.02 0.94 16 37 H 0.42 -4.61 8.39 -92.71 -0.78 -5.39 16 38 H 0.08 -0.22 8.14 -2.39 -0.02 -0.24 16 39 H 0.04 0.26 8.14 -2.39 -0.02 0.24 16 40 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 41 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 42 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 43 H 0.06 -0.22 8.14 -2.38 -0.02 -0.24 16 44 H 0.05 -0.06 8.14 -2.39 -0.02 -0.08 16 45 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 46 H 0.08 -0.48 8.14 -2.38 -0.02 -0.50 16 47 H 0.08 -0.54 8.14 -2.39 -0.02 -0.56 16 48 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 Total: 0.00 -23.97 379.25 0.87 -23.10 By element: Atomic # 1 Polarization: -13.92 SS G_CDS: -0.43 Total: -14.35 kcal Atomic # 6 Polarization: 3.80 SS G_CDS: 3.81 Total: 7.61 kcal Atomic # 7 Polarization: 2.08 SS G_CDS: -2.23 Total: -0.15 kcal Atomic # 8 Polarization: -13.71 SS G_CDS: -2.33 Total: -16.04 kcal Atomic # 14 Polarization: -2.21 SS G_CDS: 2.04 Total: -0.17 kcal Total: -23.97 0.87 -23.10 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_10157680.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.573 kcal (2) G-P(sol) polarization free energy of solvation -23.969 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.542 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.871 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.098 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.671 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds