Wall clock time and date at job start Tue Mar 9 2021 14:32:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 H 1.08993 * 109.46765 * 2 1 4 4 C 1.52999 * 109.47000 * 120.00585 * 2 1 3 5 5 C 1.53006 * 109.46626 * 180.02562 * 4 2 1 6 6 C 1.52997 * 109.47127 * 299.99539 * 5 4 2 7 7 H 1.08996 * 109.46952 * 300.00302 * 6 5 4 8 8 N 1.46496 * 109.46953 * 179.97438 * 6 5 4 9 9 C 1.34781 * 119.99775 * 154.99854 * 8 6 5 10 10 O 1.21699 * 120.00111 * 0.02562 * 9 8 6 11 11 C 1.46676 * 120.00119 * 180.02562 * 9 8 6 12 12 C 1.37874 * 126.23563 * 180.02562 * 11 9 8 13 13 C 1.39833 * 107.08523 * 179.97438 * 12 11 9 14 14 C 1.50700 * 126.06990 * 180.02562 * 13 12 11 15 15 O 1.42907 * 109.46823 * 65.00287 * 14 13 12 16 16 Si 1.86294 * 109.47430 * 185.00280 * 14 13 12 17 17 C 1.35455 * 107.86525 * 0.02562 * 13 12 11 18 18 N 1.35533 * 108.87331 * 359.76243 * 17 13 12 19 19 C 1.53002 * 109.46817 * 60.00361 * 6 5 4 20 20 C 1.52996 * 109.46972 * 299.99733 * 19 6 5 21 21 H 1.09000 * 109.46866 * 299.99600 * 1 2 3 22 22 H 1.09001 * 109.47372 * 60.00008 * 1 2 3 23 23 H 1.09004 * 109.47107 * 179.97438 * 1 2 3 24 24 H 1.08993 * 109.47839 * 60.00073 * 4 2 1 25 25 H 1.09000 * 109.47160 * 299.99635 * 4 2 1 26 26 H 1.09001 * 109.46801 * 59.99811 * 5 4 2 27 27 H 1.09001 * 109.46998 * 179.97438 * 5 4 2 28 28 H 0.97001 * 120.00575 * 335.00735 * 8 6 5 29 29 H 1.07992 * 126.45637 * 359.92784 * 12 11 9 30 30 H 1.08996 * 109.46975 * 305.01137 * 14 13 12 31 31 H 0.96702 * 113.99555 * 59.99984 * 15 14 13 32 32 H 1.48503 * 109.99891 * 180.02562 * 16 14 13 33 33 H 1.48504 * 110.00079 * 301.32121 * 16 14 13 34 34 H 1.07997 * 125.56116 * 179.97438 * 17 13 12 35 35 H 0.96992 * 125.68162 * 180.26664 * 18 17 13 36 36 H 1.08996 * 109.47407 * 60.00219 * 19 6 5 37 37 H 1.09000 * 109.46986 * 179.97438 * 19 6 5 38 38 H 1.09001 * 109.46993 * 180.02562 * 20 19 6 39 39 H 1.09000 * 109.47380 * 299.99696 * 20 19 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0400 -0.7214 1.2492 5 6 3.5701 -0.7208 1.2494 6 6 4.0806 -1.4416 0.0001 7 1 3.7176 -2.4693 -0.0001 8 7 5.5455 -1.4404 0.0001 9 6 6.2201 -2.3961 -0.6694 10 8 5.6122 -3.2596 -1.2743 11 6 7.6869 -2.3953 -0.6691 12 6 8.5025 -3.3055 -1.3073 13 6 9.8232 -2.9289 -1.0441 14 6 11.0614 -3.6316 -1.5380 15 8 11.1275 -3.5356 -2.9623 16 14 12.5691 -2.8319 -0.7910 17 6 9.7920 -1.8202 -0.2665 18 7 8.4998 -1.4829 -0.0354 19 6 3.5705 -0.7202 -1.2490 20 6 2.0405 -0.7208 -1.2493 21 1 -0.3633 0.5138 0.8900 22 1 -0.3634 0.5138 -0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 1.6768 -1.7490 1.2492 25 1 1.6767 -0.2076 2.1392 26 1 3.9330 0.3071 1.2497 27 1 3.9335 -1.2343 2.1396 28 1 6.0301 -0.7520 0.4820 29 1 8.1818 -4.1504 -1.8985 30 1 11.0244 -4.6811 -1.2460 31 1 11.1630 -2.6280 -3.2940 32 1 13.7970 -3.5156 -1.2708 33 1 12.6141 -1.3930 -1.1556 34 1 10.6559 -1.2896 0.1056 35 1 8.1981 -0.7256 0.4901 36 1 3.9335 0.3075 -1.2488 37 1 3.9345 -1.2335 -2.1391 38 1 1.6772 -0.2073 -2.1394 39 1 1.6776 -1.7486 -1.2496 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_4279154_10543058.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:32:59 Heat of formation + Delta-G solvation = -41.806816 kcal Electronic energy + Delta-G solvation = -20070.522456 eV Core-core repulsion = 16979.317375 eV Total energy + Delta-G solvation = -3091.205081 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 265.146 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -42.50025 -40.82811 -39.20978 -37.80266 -35.83809 -32.89515 -32.08564 -31.79754 -30.57007 -27.29310 -26.22511 -24.14631 -23.71706 -22.11725 -21.35738 -20.96414 -20.61858 -19.86603 -17.74758 -17.32267 -16.99429 -16.53773 -15.99970 -15.85937 -15.49038 -15.25403 -15.22307 -14.92013 -14.62657 -14.52114 -14.16616 -13.86989 -13.72510 -13.42258 -13.25744 -13.17205 -12.57407 -12.45418 -12.13781 -11.97705 -11.83213 -11.74131 -11.37956 -11.22468 -11.09882 -10.48385 -10.25917 -9.97858 -9.30917 -4.83154 0.34659 1.39388 1.54547 1.68268 1.91163 2.09356 2.13542 2.24142 3.55339 3.60070 3.69157 3.75943 3.91087 3.97944 4.06317 4.15025 4.16034 4.34083 4.37091 4.40889 4.49913 4.53517 4.71681 4.75463 4.76491 4.87631 4.94216 4.97223 5.01610 5.05843 5.10023 5.15667 5.19816 5.30649 5.37731 5.40651 5.53400 5.57944 5.72077 6.34608 6.51147 6.62742 7.04986 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.090 4.090 3 H 0.078 0.922 4 C -0.112 4.112 5 C -0.117 4.117 6 C 0.147 3.853 7 H 0.064 0.936 8 N -0.711 5.711 9 C 0.587 3.413 10 O -0.577 6.577 11 C -0.070 4.070 12 C -0.106 4.106 13 C -0.224 4.224 14 C -0.063 4.063 15 O -0.558 6.558 16 Si 0.791 3.209 17 C 0.061 3.939 18 N -0.514 5.514 19 C -0.124 4.124 20 C -0.112 4.112 21 H 0.061 0.939 22 H 0.054 0.946 23 H 0.050 0.950 24 H 0.057 0.943 25 H 0.081 0.919 26 H 0.087 0.913 27 H 0.077 0.923 28 H 0.411 0.589 29 H 0.122 0.878 30 H 0.107 0.893 31 H 0.384 0.616 32 H -0.314 1.314 33 H -0.266 1.266 34 H 0.215 0.785 35 H 0.437 0.563 36 H 0.076 0.924 37 H 0.040 0.960 38 H 0.066 0.934 39 H 0.053 0.947 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.145 7.557 7.402 10.640 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.109 4.109 3 H 0.097 0.903 4 C -0.150 4.150 5 C -0.155 4.155 6 C 0.043 3.957 7 H 0.082 0.918 8 N -0.362 5.362 9 C 0.376 3.624 10 O -0.457 6.457 11 C -0.183 4.183 12 C -0.133 4.133 13 C -0.230 4.230 14 C -0.171 4.171 15 O -0.366 6.366 16 Si 0.695 3.305 17 C -0.077 4.077 18 N -0.111 5.111 19 C -0.163 4.163 20 C -0.150 4.150 21 H 0.081 0.919 22 H 0.073 0.927 23 H 0.069 0.931 24 H 0.076 0.924 25 H 0.099 0.901 26 H 0.105 0.895 27 H 0.095 0.905 28 H 0.248 0.752 29 H 0.140 0.860 30 H 0.125 0.875 31 H 0.233 0.767 32 H -0.243 1.243 33 H -0.192 1.192 34 H 0.231 0.769 35 H 0.279 0.721 36 H 0.095 0.905 37 H 0.059 0.941 38 H 0.085 0.915 39 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges 1.268 6.868 6.979 9.873 hybrid contribution -0.437 0.429 -1.223 1.368 sum 0.830 7.296 5.755 9.330 Atomic orbital electron populations 1.21840 0.95011 1.01779 1.02090 1.21154 0.95694 0.99816 0.94188 0.90315 1.21559 0.94183 1.00952 0.98264 1.21767 0.96472 1.01521 0.95750 1.21024 0.78274 1.00119 0.96321 0.91812 1.45812 1.07620 1.29898 1.52847 1.17302 0.85488 0.81217 0.78412 1.90848 1.69518 1.39514 1.45798 1.20120 0.89798 0.98588 1.09751 1.21233 0.92719 0.99057 1.00273 1.19876 0.94692 1.00868 1.07561 1.24792 1.03105 1.05734 0.83444 1.86574 1.95743 1.33444 1.20865 0.94228 0.71384 0.76124 0.88783 1.22391 0.87386 0.97530 1.00429 1.41850 1.05520 1.23625 1.40150 1.21856 0.96458 1.00891 0.97079 1.21551 0.94091 1.00705 0.98634 0.91947 0.92703 0.93099 0.92411 0.90086 0.89462 0.90468 0.75212 0.85966 0.87498 0.76694 1.24289 1.19192 0.76857 0.72115 0.90493 0.94095 0.91535 0.92798 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.38 9.19 71.98 0.66 1.04 16 2 C -0.09 0.27 2.72 -10.79 -0.03 0.24 16 3 H 0.08 -0.33 8.14 -2.39 -0.02 -0.35 16 4 C -0.11 0.46 5.20 30.60 0.16 0.62 16 5 C -0.12 0.65 5.39 30.60 0.16 0.81 16 6 C 0.15 0.02 2.45 44.99 0.11 0.13 16 7 H 0.06 0.40 7.58 -2.39 -0.02 0.38 16 8 N -0.71 0.95 5.07 -446.50 -2.26 -1.31 16 9 C 0.59 4.02 7.75 86.45 0.67 4.69 16 10 O -0.58 -9.82 16.55 -4.34 -0.07 -9.89 16 11 C -0.07 -0.23 7.06 40.35 0.28 0.06 16 12 C -0.11 -0.74 10.59 22.57 0.24 -0.50 16 13 C -0.22 -0.16 5.43 -20.12 -0.11 -0.27 16 14 C -0.06 -0.05 3.02 71.24 0.22 0.16 16 15 O -0.56 -3.06 12.88 -148.98 -1.92 -4.98 16 16 Si 0.79 -3.45 30.60 68.60 2.10 -1.35 16 17 C 0.06 -0.38 10.45 83.48 0.87 0.49 16 18 N -0.51 3.30 5.99 -183.62 -1.10 2.20 16 19 C -0.12 -0.14 5.49 30.59 0.17 0.03 16 20 C -0.11 -0.01 5.20 30.59 0.16 0.14 16 21 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 22 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 23 H 0.05 -0.07 8.14 -2.38 -0.02 -0.09 16 24 H 0.06 -0.11 8.14 -2.39 -0.02 -0.13 16 25 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 26 H 0.09 -0.77 8.14 -2.39 -0.02 -0.78 16 27 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 28 H 0.41 -3.78 7.73 -92.71 -0.72 -4.50 16 29 H 0.12 1.41 8.06 -2.91 -0.02 1.39 16 30 H 0.11 0.16 7.96 -2.39 -0.02 0.14 16 31 H 0.38 -0.39 8.70 -74.06 -0.64 -1.04 16 32 H -0.31 -1.61 7.11 99.48 0.71 -0.90 16 33 H -0.27 0.87 7.11 99.48 0.71 1.58 16 34 H 0.22 -3.04 6.21 -2.91 -0.02 -3.06 16 35 H 0.44 -6.30 8.19 -92.71 -0.76 -7.05 16 36 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 37 H 0.04 0.29 8.14 -2.39 -0.02 0.27 16 38 H 0.07 0.01 8.14 -2.39 -0.02 -0.01 16 39 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 Total: 0.00 -22.54 317.39 -0.71 -23.25 By element: Atomic # 1 Polarization: -14.54 SS G_CDS: -1.02 Total: -15.56 kcal Atomic # 6 Polarization: 4.08 SS G_CDS: 3.57 Total: 7.64 kcal Atomic # 7 Polarization: 4.25 SS G_CDS: -3.37 Total: 0.88 kcal Atomic # 8 Polarization: -12.88 SS G_CDS: -1.99 Total: -14.87 kcal Atomic # 14 Polarization: -3.45 SS G_CDS: 2.10 Total: -1.35 kcal Total: -22.54 -0.71 -23.25 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_10543058.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.558 kcal (2) G-P(sol) polarization free energy of solvation -22.540 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.098 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.709 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.249 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.807 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds