Wall clock time and date at job start Tue Mar 9 2021 14:33:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52991 * 1 3 3 H 1.08994 * 109.47710 * 2 1 4 4 C 1.53008 * 109.46919 * 119.99720 * 2 1 3 5 5 C 1.53005 * 109.46910 * 179.97438 * 4 2 1 6 6 C 1.53002 * 109.47127 * 300.00012 * 5 4 2 7 7 H 1.09000 * 109.46833 * 300.00296 * 6 5 4 8 8 N 1.46500 * 109.47051 * 180.02562 * 6 5 4 9 9 C 1.34777 * 120.00065 * 155.00114 * 8 6 5 10 10 O 1.21565 * 119.99743 * 359.97438 * 9 8 6 11 11 C 1.47688 * 119.99880 * 179.97438 * 9 8 6 12 12 C 1.39831 * 120.16578 * 179.97438 * 11 9 8 13 13 F 1.35098 * 120.10803 * 0.02562 * 12 11 9 14 14 C 1.38322 * 119.77887 * 179.97438 * 12 11 9 15 15 C 1.38205 * 120.11576 * 0.26166 * 14 12 11 16 16 C 1.38455 * 120.33851 * 359.48118 * 15 14 12 17 17 C 1.50709 * 119.88735 * 180.23843 * 16 15 14 18 18 O 1.42899 * 109.46992 * 245.27439 * 17 16 15 19 19 Si 1.86296 * 109.47070 * 5.27711 * 17 16 15 20 20 C 1.37850 * 120.22366 * 0.51819 * 16 15 14 21 21 C 1.52998 * 109.47204 * 60.00052 * 6 5 4 22 22 C 1.52998 * 109.47062 * 239.99306 * 2 1 3 23 23 H 1.09005 * 109.47456 * 300.00402 * 1 2 3 24 24 H 1.08998 * 109.47458 * 60.00348 * 1 2 3 25 25 H 1.09000 * 109.47610 * 180.02562 * 1 2 3 26 26 H 1.09005 * 109.47085 * 60.00012 * 4 2 1 27 27 H 1.08998 * 109.47337 * 299.99649 * 4 2 1 28 28 H 1.09004 * 109.46857 * 180.02562 * 5 4 2 29 29 H 1.08998 * 109.46776 * 60.00003 * 5 4 2 30 30 H 0.97001 * 119.99695 * 334.99690 * 8 6 5 31 31 H 1.08002 * 119.93718 * 179.97438 * 14 12 11 32 32 H 1.08005 * 119.82613 * 179.72427 * 15 14 12 33 33 H 1.09000 * 109.46984 * 125.28296 * 17 16 15 34 34 H 0.96696 * 113.99929 * 179.97438 * 18 17 16 35 35 H 1.48494 * 110.00027 * 299.99966 * 19 17 16 36 36 H 1.48496 * 109.99918 * 61.32230 * 19 17 16 37 37 H 1.08001 * 120.06566 * 179.72028 * 20 16 15 38 38 H 1.09005 * 109.46991 * 59.99876 * 21 6 5 39 39 H 1.08998 * 109.47305 * 180.02562 * 21 6 5 40 40 H 1.08998 * 109.47555 * 299.99933 * 22 2 1 41 41 H 1.09003 * 109.47243 * 60.00606 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0399 -0.7212 1.2494 5 6 3.5699 -0.7218 1.2490 6 6 4.0794 -1.4435 -0.0002 7 1 3.7156 -2.4710 0.0001 8 7 5.5444 -1.4445 -0.0002 9 6 6.2176 -2.4012 -0.6696 10 8 5.6091 -3.2634 -1.2731 11 6 7.6945 -2.4019 -0.6700 12 6 8.3965 -3.3930 -1.3630 13 9 7.7260 -4.3539 -2.0355 14 6 9.7797 -3.3857 -1.3585 15 6 10.4657 -2.4052 -0.6669 16 6 9.7755 -1.4185 0.0164 17 6 10.5339 -0.3512 0.7627 18 8 10.2819 -0.4790 2.1635 19 14 12.3584 -0.5449 0.4397 20 6 8.3971 -1.4124 0.0213 21 6 3.5694 -0.7223 -1.2495 22 6 2.0399 -0.7214 -1.2491 23 1 -0.3634 0.5139 0.8900 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3634 -1.0276 0.0005 26 1 1.6765 -1.7489 1.2494 27 1 1.6766 -0.2074 2.1393 28 1 3.9332 -1.2360 2.1389 29 1 3.9336 0.3057 1.2488 30 1 6.0299 -0.7567 0.4816 31 1 10.3245 -4.1502 -1.8925 32 1 11.5457 -2.4066 -0.6629 33 1 10.2071 0.6316 0.4230 34 1 10.7394 0.1771 2.7069 35 1 12.8164 -1.8809 0.8985 36 1 12.6377 -0.3823 -1.0097 37 1 7.8613 -0.6441 0.5589 38 1 3.9332 0.3053 -1.2497 39 1 3.9320 -1.2367 -2.1394 40 1 1.6766 -1.7491 -1.2491 41 1 1.6766 -0.2076 -2.1392 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_12335834.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:33:14 Heat of formation + Delta-G solvation = -99.217902 kcal Electronic energy + Delta-G solvation = -23838.613018 eV Core-core repulsion = 20212.664200 eV Total energy + Delta-G solvation = -3625.948817 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.142 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -49.85040 -41.42495 -40.28666 -39.11940 -37.61152 -35.70696 -33.28290 -32.54030 -31.81439 -31.55968 -27.14508 -26.68839 -25.27467 -23.78733 -23.26262 -22.01116 -21.46961 -20.73490 -19.13973 -18.65736 -18.24049 -17.88945 -16.99763 -16.75178 -16.45130 -16.09805 -15.81935 -15.55541 -15.37786 -15.25574 -15.21909 -14.73250 -14.44075 -14.25938 -14.16793 -13.92377 -13.66833 -13.37344 -13.24105 -13.17330 -12.63548 -12.60384 -12.50765 -12.13460 -12.08369 -11.95399 -11.70725 -11.34855 -11.15061 -10.88366 -10.51473 -10.41973 -10.04815 -9.83296 -5.12395 -0.52434 -0.11140 1.09801 1.49175 1.66912 1.80140 2.00820 2.47357 3.00561 3.10924 3.34998 3.45950 3.58834 3.65116 3.67872 3.81919 3.92224 3.99447 4.04162 4.14451 4.15831 4.36476 4.40625 4.44352 4.48109 4.52665 4.63734 4.70130 4.74503 4.76531 4.82331 4.88595 4.95541 5.01483 5.04060 5.12154 5.14885 5.21571 5.27983 5.36142 5.46038 5.50279 5.53687 6.41665 6.43369 7.16901 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.095 4.095 3 H 0.071 0.929 4 C -0.111 4.111 5 C -0.127 4.127 6 C 0.146 3.854 7 H 0.091 0.909 8 N -0.722 5.722 9 C 0.560 3.440 10 O -0.519 6.519 11 C -0.173 4.173 12 C 0.167 3.833 13 F -0.110 7.110 14 C -0.155 4.155 15 C -0.067 4.067 16 C -0.095 4.095 17 C -0.071 4.071 18 O -0.545 6.545 19 Si 0.683 3.317 20 C -0.028 4.028 21 C -0.129 4.129 22 C -0.112 4.112 23 H 0.055 0.945 24 H 0.055 0.945 25 H 0.055 0.945 26 H 0.066 0.934 27 H 0.069 0.931 28 H 0.070 0.930 29 H 0.069 0.931 30 H 0.399 0.601 31 H 0.150 0.850 32 H 0.133 0.867 33 H 0.079 0.921 34 H 0.385 0.615 35 H -0.248 1.248 36 H -0.252 1.252 37 H 0.140 0.860 38 H 0.064 0.936 39 H 0.068 0.932 40 H 0.065 0.935 41 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.280 6.887 3.589 8.430 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.149 4.149 5 C -0.165 4.165 6 C 0.042 3.958 7 H 0.109 0.891 8 N -0.373 5.373 9 C 0.347 3.653 10 O -0.395 6.395 11 C -0.177 4.177 12 C 0.147 3.853 13 F -0.087 7.087 14 C -0.174 4.174 15 C -0.085 4.085 16 C -0.096 4.096 17 C -0.182 4.182 18 O -0.352 6.352 19 Si 0.584 3.416 20 C -0.046 4.046 21 C -0.168 4.168 22 C -0.150 4.150 23 H 0.074 0.926 24 H 0.074 0.926 25 H 0.074 0.926 26 H 0.085 0.915 27 H 0.088 0.912 28 H 0.089 0.911 29 H 0.087 0.913 30 H 0.234 0.766 31 H 0.167 0.833 32 H 0.151 0.849 33 H 0.097 0.903 34 H 0.233 0.767 35 H -0.173 1.173 36 H -0.177 1.177 37 H 0.158 0.842 38 H 0.083 0.917 39 H 0.087 0.913 40 H 0.084 0.916 41 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 3.043 5.256 2.496 6.566 hybrid contribution -0.305 0.103 -0.064 0.329 sum 2.737 5.358 2.432 6.490 Atomic orbital electron populations 1.21833 0.94957 1.02028 1.01836 1.21185 0.95751 0.99640 0.94719 0.91098 1.21552 0.93927 1.01359 0.98070 1.21818 0.96788 1.00874 0.96983 1.21066 0.78199 1.01270 0.95278 0.89136 1.45967 1.07556 1.30343 1.53470 1.17927 0.86317 0.81746 0.79338 1.90867 1.69357 1.36772 1.42524 1.20110 0.94107 0.98835 1.04678 1.17707 0.89669 0.86204 0.91769 1.91630 1.80332 1.60152 1.76629 1.21114 0.91982 1.01410 1.02914 1.20976 0.99657 0.92718 0.95108 1.19299 0.93629 0.96955 0.99681 1.24644 1.10506 0.98553 0.84447 1.86487 1.74394 1.59128 1.15176 0.95041 0.77303 0.85903 0.83329 1.21008 0.93329 0.96053 0.94252 1.21917 0.96100 1.00696 0.98092 1.21556 0.94478 1.01179 0.97818 0.92588 0.92571 0.92560 0.91492 0.91231 0.91099 0.91255 0.76559 0.83268 0.84932 0.90307 0.76668 1.17270 1.17668 0.84189 0.91728 0.91325 0.91576 0.91509 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.12 9.19 37.15 0.34 0.46 16 2 C -0.09 0.08 2.72 -90.62 -0.25 -0.17 16 3 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 4 C -0.11 0.12 5.20 -26.72 -0.14 -0.02 16 5 C -0.13 0.16 5.39 -26.73 -0.14 0.02 16 6 C 0.15 0.10 2.45 -67.93 -0.17 -0.06 16 7 H 0.09 0.26 7.58 -51.93 -0.39 -0.13 16 8 N -0.72 -0.52 5.03 -54.80 -0.28 -0.80 16 9 C 0.56 2.26 7.73 -12.40 -0.10 2.17 16 10 O -0.52 -4.14 15.00 5.31 0.08 -4.06 16 11 C -0.17 -0.49 5.88 -104.91 -0.62 -1.11 16 12 C 0.17 0.62 7.29 -38.96 -0.28 0.34 16 13 F -0.11 -0.67 15.55 2.25 0.04 -0.63 16 14 C -0.16 -0.23 10.01 -39.56 -0.40 -0.62 16 15 C -0.07 -0.05 8.66 -39.51 -0.34 -0.40 16 16 C -0.10 -0.04 5.38 -104.68 -0.56 -0.60 16 17 C -0.07 0.16 2.79 36.01 0.10 0.26 16 18 O -0.55 1.08 12.81 -35.23 -0.45 0.63 16 19 Si 0.68 -1.91 29.85 -169.99 -5.07 -6.98 16 20 C -0.03 -0.01 9.17 -39.19 -0.36 -0.37 16 21 C -0.13 -0.10 5.49 -26.75 -0.15 -0.24 16 22 C -0.11 -0.01 5.20 -26.76 -0.14 -0.15 16 23 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 24 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 25 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 26 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 27 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 28 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 29 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 30 H 0.40 -0.80 6.64 -40.82 -0.27 -1.07 16 31 H 0.15 -0.09 8.06 -52.49 -0.42 -0.51 16 32 H 0.13 -0.04 4.84 -52.48 -0.25 -0.30 16 33 H 0.08 -0.33 7.96 -51.93 -0.41 -0.74 16 34 H 0.39 -2.63 8.74 45.56 0.40 -2.23 16 35 H -0.25 -0.08 7.04 56.52 0.40 0.32 16 36 H -0.25 0.08 7.11 56.52 0.40 0.49 16 37 H 0.14 -0.31 6.41 -52.49 -0.34 -0.65 16 38 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 39 H 0.07 0.20 8.14 -51.93 -0.42 -0.22 16 40 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 41 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 LS Contribution 332.86 15.07 5.02 5.02 Total: 0.00 -7.72 332.86 -9.83 -17.55 By element: Atomic # 1 Polarization: -4.27 SS G_CDS: -5.97 Total: -10.24 kcal Atomic # 6 Polarization: 2.71 SS G_CDS: -3.20 Total: -0.49 kcal Atomic # 7 Polarization: -0.52 SS G_CDS: -0.28 Total: -0.80 kcal Atomic # 8 Polarization: -3.06 SS G_CDS: -0.37 Total: -3.43 kcal Atomic # 9 Polarization: -0.67 SS G_CDS: 0.04 Total: -0.63 kcal Atomic # 14 Polarization: -1.91 SS G_CDS: -5.07 Total: -6.98 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -7.72 -9.83 -17.55 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_12335834.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.664 kcal (2) G-P(sol) polarization free energy of solvation -7.720 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.384 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.834 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.554 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.218 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds