Wall clock time and date at job start Tue Mar 9 2021 14:33:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09002 * 109.47151 * 2 1 4 4 C 1.52999 * 109.47048 * 119.99617 * 2 1 3 5 5 C 1.53001 * 109.47322 * 180.02562 * 4 2 1 6 6 C 1.53008 * 109.46875 * 299.99939 * 5 4 2 7 7 H 1.08994 * 109.47266 * 300.00403 * 6 5 4 8 8 N 1.46503 * 109.46630 * 179.97438 * 6 5 4 9 9 C 1.34783 * 119.99414 * 155.00535 * 8 6 5 10 10 O 1.21279 * 120.00269 * 359.97438 * 9 8 6 11 11 C 1.50696 * 119.99633 * 179.97438 * 9 8 6 12 12 C 1.50703 * 109.47143 * 179.97438 * 11 9 8 13 13 C 1.38237 * 120.00057 * 89.99839 * 12 11 9 14 14 C 1.38227 * 119.99741 * 179.97438 * 13 12 11 15 15 C 1.38230 * 120.00385 * 0.02562 * 14 13 12 16 16 C 1.50703 * 120.00069 * 179.97438 * 15 14 13 17 17 O 1.42896 * 109.47055 * 300.00206 * 16 15 14 18 18 Si 1.86304 * 109.46911 * 180.02562 * 16 15 14 19 19 C 1.38232 * 119.99842 * 0.25216 * 15 14 13 20 20 C 1.38233 * 119.99837 * 270.02089 * 12 11 9 21 21 C 1.52997 * 109.46648 * 60.00206 * 6 5 4 22 22 C 1.52996 * 109.47398 * 239.99782 * 2 1 3 23 23 H 1.08999 * 109.47485 * 300.00105 * 1 2 3 24 24 H 1.09000 * 109.46980 * 60.00255 * 1 2 3 25 25 H 1.09002 * 109.47151 * 179.97438 * 1 2 3 26 26 H 1.09002 * 109.46832 * 60.00187 * 4 2 1 27 27 H 1.08999 * 109.47204 * 300.00450 * 4 2 1 28 28 H 1.09007 * 109.46782 * 180.02562 * 5 4 2 29 29 H 1.08994 * 109.47502 * 60.00197 * 5 4 2 30 30 H 0.96991 * 120.00078 * 335.00158 * 8 6 5 31 31 H 1.09006 * 109.47111 * 59.99482 * 11 9 8 32 32 H 1.09003 * 109.47456 * 299.99936 * 11 9 8 33 33 H 1.08006 * 119.99584 * 0.02562 * 13 12 11 34 34 H 1.08004 * 119.99469 * 179.97438 * 14 13 12 35 35 H 1.09002 * 109.47152 * 60.00014 * 16 15 14 36 36 H 0.96708 * 114.00101 * 299.99358 * 17 16 15 37 37 H 1.48501 * 109.99652 * 179.97438 * 18 16 15 38 38 H 1.48494 * 110.00064 * 301.31786 * 18 16 15 39 39 H 1.08001 * 120.00311 * 179.72122 * 19 15 14 40 40 H 1.07996 * 120.00408 * 0.02562 * 20 12 11 41 41 H 1.09002 * 109.47287 * 59.99837 * 21 6 5 42 42 H 1.09005 * 109.47084 * 179.97438 * 21 6 5 43 43 H 1.09002 * 109.47148 * 300.00220 * 22 2 1 44 44 H 1.09001 * 109.47340 * 60.00508 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0400 -0.7212 1.2493 5 6 3.5700 -0.7206 1.2497 6 6 4.0805 -1.4417 0.0004 7 1 3.7175 -2.4694 0.0002 8 7 5.5455 -1.4406 0.0005 9 6 6.2201 -2.3963 -0.6690 10 8 5.6143 -3.2574 -1.2711 11 6 7.7270 -2.3949 -0.6694 12 6 8.2302 -3.5589 -1.4837 13 6 8.4601 -3.4067 -2.8383 14 6 8.9221 -4.4742 -3.5850 15 6 9.1539 -5.6940 -2.9775 16 6 9.6571 -6.8580 -3.7918 17 8 8.7158 -7.1596 -4.8238 18 14 9.8650 -8.3443 -2.6879 19 6 8.9185 -5.8478 -1.6240 20 6 8.4615 -4.7788 -0.8761 21 6 3.5705 -0.7204 -1.2488 22 6 2.0400 -0.7213 -1.2492 23 1 -0.3634 0.5138 0.8899 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 1.6766 -1.7488 1.2493 27 1 1.6766 -0.2073 2.1392 28 1 3.9332 -1.2349 2.1395 29 1 3.9330 0.3071 1.2499 30 1 6.0299 -0.7522 0.4823 31 1 8.0907 -2.4839 0.3544 32 1 8.0894 -1.4633 -1.1040 33 1 8.2794 -2.4535 -3.3129 34 1 9.1013 -4.3554 -4.6435 35 1 10.6169 -6.6003 -4.2395 36 1 7.8373 -7.3983 -4.4975 37 1 10.3602 -9.4992 -3.4793 38 1 10.8171 -8.0335 -1.5916 39 1 9.0952 -6.8020 -1.1501 40 1 8.2812 -4.8980 0.1820 41 1 3.9335 0.3074 -1.2486 42 1 3.9346 -1.2338 -2.1388 43 1 1.6767 -1.7489 -1.2492 44 1 1.6768 -0.2074 -2.1392 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_12335836.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:33:16 Heat of formation + Delta-G solvation = -66.526982 kcal Electronic energy + Delta-G solvation = -22901.941938 eV Core-core repulsion = 19591.327062 eV Total energy + Delta-G solvation = -3310.614876 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 290.167 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.28173 -40.38491 -39.21138 -37.55550 -35.61246 -34.04357 -32.19154 -31.88217 -31.80535 -29.67569 -26.95901 -25.47825 -23.80316 -23.75542 -22.62111 -21.82678 -21.32830 -20.68642 -18.40248 -18.04599 -17.54149 -16.92468 -16.51253 -16.27136 -16.01224 -15.79669 -15.39195 -15.27336 -15.22953 -14.86676 -14.63077 -14.45752 -14.27822 -13.95831 -13.72702 -13.31361 -13.23764 -13.18491 -13.07740 -12.77164 -12.56749 -12.17815 -12.14369 -11.96473 -11.89615 -11.70768 -11.62874 -11.35162 -11.14668 -10.77692 -10.37111 -10.00782 -9.81067 -9.54919 -4.97873 0.29720 0.52098 1.35105 1.66837 1.70199 2.00484 2.15268 2.83616 3.50960 3.59357 3.63261 3.66106 3.79403 3.82305 3.89613 4.00383 4.05478 4.06796 4.15278 4.27094 4.35913 4.39846 4.43890 4.47107 4.51263 4.51538 4.56852 4.70717 4.73649 4.74788 4.87382 4.94552 5.00184 5.03991 5.11034 5.12293 5.14370 5.20918 5.27358 5.35138 5.43078 5.47644 5.54721 5.60017 5.63586 6.05409 6.50956 6.63808 7.28167 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.094 4.094 3 H 0.070 0.930 4 C -0.111 4.111 5 C -0.126 4.126 6 C 0.146 3.854 7 H 0.088 0.912 8 N -0.731 5.731 9 C 0.515 3.485 10 O -0.526 6.526 11 C -0.105 4.105 12 C -0.062 4.062 13 C -0.104 4.104 14 C -0.091 4.091 15 C -0.119 4.119 16 C -0.068 4.068 17 O -0.541 6.541 18 Si 0.688 3.312 19 C -0.115 4.115 20 C -0.100 4.100 21 C -0.129 4.129 22 C -0.112 4.112 23 H 0.055 0.945 24 H 0.055 0.945 25 H 0.055 0.945 26 H 0.066 0.934 27 H 0.068 0.932 28 H 0.069 0.931 29 H 0.068 0.932 30 H 0.400 0.600 31 H 0.104 0.896 32 H 0.104 0.896 33 H 0.122 0.878 34 H 0.126 0.874 35 H 0.113 0.887 36 H 0.380 0.620 37 H -0.255 1.255 38 H -0.258 1.258 39 H 0.126 0.874 40 H 0.124 0.876 41 H 0.063 0.937 42 H 0.067 0.933 43 H 0.065 0.935 44 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.207 3.503 4.303 5.679 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.149 4.149 5 C -0.164 4.164 6 C 0.041 3.959 7 H 0.106 0.894 8 N -0.383 5.383 9 C 0.300 3.700 10 O -0.401 6.401 11 C -0.144 4.144 12 C -0.063 4.063 13 C -0.122 4.122 14 C -0.109 4.109 15 C -0.120 4.120 16 C -0.179 4.179 17 O -0.346 6.346 18 Si 0.590 3.410 19 C -0.133 4.133 20 C -0.118 4.118 21 C -0.167 4.167 22 C -0.151 4.151 23 H 0.074 0.926 24 H 0.074 0.926 25 H 0.074 0.926 26 H 0.085 0.915 27 H 0.087 0.913 28 H 0.088 0.912 29 H 0.087 0.913 30 H 0.234 0.766 31 H 0.122 0.878 32 H 0.122 0.878 33 H 0.140 0.860 34 H 0.144 0.856 35 H 0.130 0.870 36 H 0.227 0.773 37 H -0.180 1.180 38 H -0.183 1.183 39 H 0.143 0.857 40 H 0.142 0.858 41 H 0.081 0.919 42 H 0.086 0.914 43 H 0.084 0.916 44 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -0.572 2.392 3.813 4.538 hybrid contribution 0.483 1.027 0.012 1.135 sum -0.089 3.419 3.825 5.131 Atomic orbital electron populations 1.21836 0.94988 1.02016 1.01833 1.21181 0.95730 0.99626 0.94749 0.91149 1.21550 0.94074 1.01295 0.98028 1.21811 0.96685 1.00863 0.97071 1.21002 0.78928 1.00949 0.94987 0.89397 1.46128 1.07318 1.30806 1.54014 1.20550 0.89689 0.81135 0.78577 1.90751 1.70190 1.36850 1.42339 1.20704 0.92412 0.99007 1.02312 1.19266 0.98861 0.94222 0.93934 1.21011 0.98848 0.99117 0.93204 1.20948 0.98089 0.91884 0.99972 1.20321 1.01347 0.96126 0.94169 1.25048 0.94942 1.02187 0.95734 1.86488 1.24468 1.90703 1.32969 0.94609 0.89288 0.77927 0.79130 1.20935 1.00272 0.98634 0.93458 1.20903 0.98809 0.92174 0.99922 1.21922 0.95983 1.00640 0.98187 1.21572 0.94611 1.01109 0.97762 0.92601 0.92582 0.92562 0.91539 0.91340 0.91249 0.91347 0.76648 0.87767 0.87804 0.86047 0.85644 0.87003 0.77275 1.18025 1.18333 0.85683 0.85824 0.91856 0.91424 0.91622 0.91595 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.17 9.19 37.16 0.34 0.51 16 2 C -0.09 0.12 2.72 -90.62 -0.25 -0.13 16 3 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 4 C -0.11 0.18 5.20 -26.73 -0.14 0.04 16 5 C -0.13 0.26 5.39 -26.73 -0.14 0.12 16 6 C 0.15 -0.07 2.46 -67.93 -0.17 -0.23 16 7 H 0.09 0.16 7.58 -51.93 -0.39 -0.23 16 8 N -0.73 0.98 5.08 -53.80 -0.27 0.71 16 9 C 0.51 0.49 7.79 -10.98 -0.09 0.41 16 10 O -0.53 -2.82 15.70 5.56 0.09 -2.73 16 11 C -0.10 0.16 5.83 -29.04 -0.17 -0.01 16 12 C -0.06 -0.07 4.37 -104.62 -0.46 -0.53 16 13 C -0.10 -0.17 9.70 -39.59 -0.38 -0.55 16 14 C -0.09 -0.19 9.61 -39.59 -0.38 -0.57 16 15 C -0.12 -0.20 5.39 -104.63 -0.56 -0.76 16 16 C -0.07 -0.07 2.82 36.01 0.10 0.03 16 17 O -0.54 -0.90 12.77 -35.23 -0.45 -1.35 16 18 Si 0.69 0.01 29.79 -169.99 -5.06 -5.05 16 19 C -0.12 -0.13 8.67 -39.58 -0.34 -0.47 16 20 C -0.10 -0.11 9.70 -39.58 -0.38 -0.49 16 21 C -0.13 0.01 5.49 -26.71 -0.15 -0.14 16 22 C -0.11 0.05 5.21 -26.71 -0.14 -0.09 16 23 H 0.05 -0.07 8.14 -51.93 -0.42 -0.50 16 24 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 25 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 26 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 27 H 0.07 -0.13 8.14 -51.93 -0.42 -0.56 16 28 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 29 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 30 H 0.40 -1.64 8.60 -40.82 -0.35 -1.99 16 31 H 0.10 -0.37 8.09 -51.93 -0.42 -0.79 16 32 H 0.10 -0.35 8.09 -51.93 -0.42 -0.77 16 33 H 0.12 0.02 8.06 -52.48 -0.42 -0.40 16 34 H 0.13 0.19 8.06 -52.48 -0.42 -0.23 16 35 H 0.11 0.14 7.96 -51.93 -0.41 -0.27 16 36 H 0.38 -0.69 8.70 45.56 0.40 -0.30 16 37 H -0.26 -0.79 7.11 56.52 0.40 -0.39 16 38 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 39 H 0.13 -0.09 4.88 -52.49 -0.26 -0.35 16 40 H 0.12 -0.08 8.06 -52.49 -0.42 -0.51 16 41 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 42 H 0.07 0.14 8.14 -51.93 -0.42 -0.29 16 43 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 44 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 LS Contribution 352.87 15.07 5.32 5.32 Total: 0.00 -7.05 352.87 -11.09 -18.13 By element: Atomic # 1 Polarization: -4.77 SS G_CDS: -7.40 Total: -12.17 kcal Atomic # 6 Polarization: 0.44 SS G_CDS: -3.31 Total: -2.87 kcal Atomic # 7 Polarization: 0.98 SS G_CDS: -0.27 Total: 0.71 kcal Atomic # 8 Polarization: -3.71 SS G_CDS: -0.36 Total: -4.08 kcal Atomic # 14 Polarization: 0.01 SS G_CDS: -5.06 Total: -5.05 kcal Total LS contribution 5.32 Total: 5.32 kcal Total: -7.05 -11.09 -18.13 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_12335836.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.395 kcal (2) G-P(sol) polarization free energy of solvation -7.046 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.441 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.086 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.132 kcal (6) G-S(sol) free energy of system = (1) + (5) -66.527 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds