Wall clock time and date at job start Tue Mar 9 2021 14:33:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09002 * 109.47151 * 2 1 4 4 C 1.52999 * 109.47048 * 119.99617 * 2 1 3 5 5 C 1.53001 * 109.47322 * 180.02562 * 4 2 1 6 6 C 1.53008 * 109.46875 * 299.99939 * 5 4 2 7 7 H 1.08994 * 109.47266 * 300.00403 * 6 5 4 8 8 N 1.46503 * 109.46630 * 179.97438 * 6 5 4 9 9 C 1.34783 * 119.99414 * 155.00535 * 8 6 5 10 10 O 1.21279 * 120.00269 * 359.97438 * 9 8 6 11 11 C 1.50696 * 119.99633 * 179.97438 * 9 8 6 12 12 C 1.50703 * 109.47143 * 179.97438 * 11 9 8 13 13 C 1.38237 * 120.00057 * 89.99839 * 12 11 9 14 14 C 1.38227 * 119.99741 * 179.97438 * 13 12 11 15 15 C 1.38230 * 120.00385 * 0.02562 * 14 13 12 16 16 C 1.50703 * 120.00069 * 179.97438 * 15 14 13 17 17 O 1.42896 * 109.47055 * 300.00206 * 16 15 14 18 18 Si 1.86304 * 109.46911 * 180.02562 * 16 15 14 19 19 C 1.38232 * 119.99842 * 0.25216 * 15 14 13 20 20 C 1.38233 * 119.99837 * 270.02089 * 12 11 9 21 21 C 1.52997 * 109.46648 * 60.00206 * 6 5 4 22 22 C 1.52996 * 109.47398 * 239.99782 * 2 1 3 23 23 H 1.08999 * 109.47485 * 300.00105 * 1 2 3 24 24 H 1.09000 * 109.46980 * 60.00255 * 1 2 3 25 25 H 1.09002 * 109.47151 * 179.97438 * 1 2 3 26 26 H 1.09002 * 109.46832 * 60.00187 * 4 2 1 27 27 H 1.08999 * 109.47204 * 300.00450 * 4 2 1 28 28 H 1.09007 * 109.46782 * 180.02562 * 5 4 2 29 29 H 1.08994 * 109.47502 * 60.00197 * 5 4 2 30 30 H 0.96991 * 120.00078 * 335.00158 * 8 6 5 31 31 H 1.09006 * 109.47111 * 59.99482 * 11 9 8 32 32 H 1.09003 * 109.47456 * 299.99936 * 11 9 8 33 33 H 1.08006 * 119.99584 * 0.02562 * 13 12 11 34 34 H 1.08004 * 119.99469 * 179.97438 * 14 13 12 35 35 H 1.09002 * 109.47152 * 60.00014 * 16 15 14 36 36 H 0.96708 * 114.00101 * 299.99358 * 17 16 15 37 37 H 1.48501 * 109.99652 * 179.97438 * 18 16 15 38 38 H 1.48494 * 110.00064 * 301.31786 * 18 16 15 39 39 H 1.08001 * 120.00311 * 179.72122 * 19 15 14 40 40 H 1.07996 * 120.00408 * 0.02562 * 20 12 11 41 41 H 1.09002 * 109.47287 * 59.99837 * 21 6 5 42 42 H 1.09005 * 109.47084 * 179.97438 * 21 6 5 43 43 H 1.09002 * 109.47148 * 300.00220 * 22 2 1 44 44 H 1.09001 * 109.47340 * 60.00508 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0400 -0.7212 1.2493 5 6 3.5700 -0.7206 1.2497 6 6 4.0805 -1.4417 0.0004 7 1 3.7175 -2.4694 0.0002 8 7 5.5455 -1.4406 0.0005 9 6 6.2201 -2.3963 -0.6690 10 8 5.6143 -3.2574 -1.2711 11 6 7.7270 -2.3949 -0.6694 12 6 8.2302 -3.5589 -1.4837 13 6 8.4601 -3.4067 -2.8383 14 6 8.9221 -4.4742 -3.5850 15 6 9.1539 -5.6940 -2.9775 16 6 9.6571 -6.8580 -3.7918 17 8 8.7158 -7.1596 -4.8238 18 14 9.8650 -8.3443 -2.6879 19 6 8.9185 -5.8478 -1.6240 20 6 8.4615 -4.7788 -0.8761 21 6 3.5705 -0.7204 -1.2488 22 6 2.0400 -0.7213 -1.2492 23 1 -0.3634 0.5138 0.8899 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 1.6766 -1.7488 1.2493 27 1 1.6766 -0.2073 2.1392 28 1 3.9332 -1.2349 2.1395 29 1 3.9330 0.3071 1.2499 30 1 6.0299 -0.7522 0.4823 31 1 8.0907 -2.4839 0.3544 32 1 8.0894 -1.4633 -1.1040 33 1 8.2794 -2.4535 -3.3129 34 1 9.1013 -4.3554 -4.6435 35 1 10.6169 -6.6003 -4.2395 36 1 7.8373 -7.3983 -4.4975 37 1 10.3602 -9.4992 -3.4793 38 1 10.8171 -8.0335 -1.5916 39 1 9.0952 -6.8020 -1.1501 40 1 8.2812 -4.8980 0.1820 41 1 3.9335 0.3074 -1.2486 42 1 3.9346 -1.2338 -2.1388 43 1 1.6767 -1.7489 -1.2492 44 1 1.6768 -0.2074 -2.1392 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_4279154_12335836.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:33:16 Heat of formation + Delta-G solvation = -62.635433 kcal Electronic energy + Delta-G solvation = -22901.773188 eV Core-core repulsion = 19591.327062 eV Total energy + Delta-G solvation = -3310.446126 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 290.167 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.31399 -40.40843 -39.22775 -37.64125 -35.63397 -34.07444 -32.16696 -31.93298 -31.74732 -29.66646 -26.93525 -25.50113 -23.82183 -23.74321 -22.60791 -21.84004 -21.34525 -20.63472 -18.47493 -18.03919 -17.56185 -16.95993 -16.54194 -16.31602 -16.06404 -15.81893 -15.43332 -15.19427 -15.18933 -14.90695 -14.70773 -14.50183 -14.23494 -14.06390 -13.69962 -13.28778 -13.21772 -13.15876 -13.02973 -12.77732 -12.50956 -12.26987 -12.09153 -11.98696 -11.91318 -11.71154 -11.65492 -11.28919 -11.11232 -10.86544 -10.45833 -10.02188 -9.88600 -9.60760 -5.01512 0.23459 0.44483 1.29562 1.59743 1.67241 1.91427 2.19271 2.79177 3.48542 3.62326 3.67274 3.73874 3.79301 3.88176 3.90757 4.04369 4.08901 4.11919 4.20530 4.35692 4.43423 4.44790 4.46354 4.47916 4.54647 4.57900 4.61500 4.71307 4.77492 4.81859 4.95862 4.99754 5.03209 5.07865 5.10491 5.15625 5.18991 5.25104 5.35445 5.37071 5.41373 5.52571 5.53793 5.58623 5.58768 6.01103 6.60265 6.70267 7.31390 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.091 4.091 3 H 0.077 0.923 4 C -0.112 4.112 5 C -0.118 4.118 6 C 0.147 3.853 7 H 0.060 0.940 8 N -0.717 5.717 9 C 0.512 3.488 10 O -0.578 6.578 11 C -0.099 4.099 12 C -0.071 4.071 13 C -0.117 4.117 14 C -0.108 4.108 15 C -0.128 4.128 16 C -0.077 4.077 17 O -0.558 6.558 18 Si 0.774 3.226 19 C -0.124 4.124 20 C -0.110 4.110 21 C -0.123 4.123 22 C -0.112 4.112 23 H 0.060 0.940 24 H 0.054 0.946 25 H 0.050 0.950 26 H 0.057 0.943 27 H 0.077 0.923 28 H 0.075 0.925 29 H 0.083 0.917 30 H 0.416 0.584 31 H 0.132 0.868 32 H 0.127 0.873 33 H 0.130 0.870 34 H 0.122 0.878 35 H 0.106 0.894 36 H 0.393 0.607 37 H -0.298 1.298 38 H -0.281 1.281 39 H 0.141 0.859 40 H 0.142 0.858 41 H 0.074 0.926 42 H 0.041 0.959 43 H 0.053 0.947 44 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.069 4.738 5.916 7.655 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.109 4.109 3 H 0.095 0.905 4 C -0.150 4.150 5 C -0.156 4.156 6 C 0.043 3.957 7 H 0.079 0.921 8 N -0.369 5.369 9 C 0.300 3.700 10 O -0.457 6.457 11 C -0.138 4.138 12 C -0.071 4.071 13 C -0.135 4.135 14 C -0.126 4.126 15 C -0.128 4.128 16 C -0.187 4.187 17 O -0.366 6.366 18 Si 0.680 3.320 19 C -0.141 4.141 20 C -0.128 4.128 21 C -0.162 4.162 22 C -0.150 4.150 23 H 0.079 0.921 24 H 0.073 0.927 25 H 0.069 0.931 26 H 0.076 0.924 27 H 0.096 0.904 28 H 0.094 0.906 29 H 0.102 0.898 30 H 0.253 0.747 31 H 0.150 0.850 32 H 0.145 0.855 33 H 0.148 0.852 34 H 0.140 0.860 35 H 0.123 0.877 36 H 0.243 0.757 37 H -0.226 1.226 38 H -0.208 1.208 39 H 0.159 0.841 40 H 0.160 0.840 41 H 0.093 0.907 42 H 0.060 0.940 43 H 0.071 0.929 44 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges -0.447 3.682 5.448 6.591 hybrid contribution 0.426 0.653 -0.528 0.942 sum -0.021 4.335 4.921 6.558 Atomic orbital electron populations 1.21840 0.95081 1.01766 1.02031 1.21152 0.95640 0.99768 0.94332 0.90504 1.21556 0.94466 1.00835 0.98120 1.21758 0.96225 1.01480 0.96127 1.20909 0.79454 0.99620 0.95742 0.92129 1.46019 1.07027 1.30627 1.53263 1.20997 0.90690 0.80580 0.77745 1.90736 1.71337 1.38954 1.44642 1.20762 0.90321 0.99010 1.03693 1.19582 0.98316 0.95229 0.93993 1.21228 0.99001 0.99427 0.93812 1.21073 0.98926 0.92564 1.00081 1.20408 1.01710 0.96105 0.94622 1.25233 0.94626 1.02944 0.95872 1.86445 1.25523 1.90808 1.33777 0.93578 0.87610 0.74377 0.76423 1.21168 1.00100 0.99535 0.93291 1.21236 0.98460 0.92177 1.00962 1.21851 0.96153 1.00851 0.97319 1.21556 0.94442 1.00554 0.98427 0.92050 0.92721 0.93063 0.92444 0.90394 0.90610 0.89796 0.74654 0.85012 0.85525 0.85198 0.86010 0.87697 0.75688 1.22587 1.20784 0.84138 0.84042 0.90723 0.93982 0.92857 0.91710 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.34 9.19 71.98 0.66 1.01 16 2 C -0.09 0.25 2.72 -10.80 -0.03 0.22 16 3 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 4 C -0.11 0.42 5.20 30.59 0.16 0.58 16 5 C -0.12 0.62 5.39 30.60 0.16 0.79 16 6 C 0.15 -0.11 2.46 44.99 0.11 0.00 16 7 H 0.06 0.32 7.58 -2.39 -0.02 0.30 16 8 N -0.72 2.46 5.08 -442.53 -2.25 0.21 16 9 C 0.51 0.90 7.79 87.65 0.68 1.59 16 10 O -0.58 -6.94 15.70 -3.02 -0.05 -6.99 16 11 C -0.10 0.42 5.83 29.10 0.17 0.59 16 12 C -0.07 -0.14 4.37 -19.86 -0.09 -0.23 16 13 C -0.12 -0.46 9.70 22.27 0.22 -0.24 16 14 C -0.11 -0.59 9.61 22.27 0.21 -0.38 16 15 C -0.13 -0.53 5.39 -19.87 -0.11 -0.64 16 16 C -0.08 -0.24 2.82 71.24 0.20 -0.04 16 17 O -0.56 -2.43 12.77 -148.98 -1.90 -4.33 16 18 Si 0.77 0.36 29.79 68.60 2.04 2.41 16 19 C -0.12 -0.28 8.67 22.27 0.19 -0.09 16 20 C -0.11 -0.21 9.70 22.27 0.22 0.01 16 21 C -0.12 -0.06 5.49 30.61 0.17 0.11 16 22 C -0.11 0.00 5.21 30.61 0.16 0.16 16 23 H 0.06 -0.20 8.14 -2.39 -0.02 -0.22 16 24 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 25 H 0.05 -0.06 8.14 -2.39 -0.02 -0.08 16 26 H 0.06 -0.10 8.14 -2.39 -0.02 -0.12 16 27 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 28 H 0.08 -0.45 8.14 -2.38 -0.02 -0.47 16 29 H 0.08 -0.66 8.14 -2.39 -0.02 -0.68 16 30 H 0.42 -4.23 8.60 -92.71 -0.80 -5.03 16 31 H 0.13 -1.28 8.09 -2.38 -0.02 -1.30 16 32 H 0.13 -1.11 8.09 -2.39 -0.02 -1.13 16 33 H 0.13 0.13 8.06 -2.91 -0.02 0.11 16 34 H 0.12 0.62 8.06 -2.91 -0.02 0.59 16 35 H 0.11 0.41 7.96 -2.39 -0.02 0.39 16 36 H 0.39 -1.11 8.70 -74.05 -0.64 -1.75 16 37 H -0.30 -2.24 7.11 99.48 0.71 -1.53 16 38 H -0.28 -1.19 7.11 99.48 0.71 -0.48 16 39 H 0.14 -0.26 4.88 -2.91 -0.01 -0.27 16 40 H 0.14 -0.35 8.06 -2.91 -0.02 -0.38 16 41 H 0.07 -0.14 8.14 -2.39 -0.02 -0.15 16 42 H 0.04 0.25 8.14 -2.38 -0.02 0.23 16 43 H 0.05 0.13 8.14 -2.39 -0.02 0.11 16 44 H 0.06 0.00 8.14 -2.39 -0.02 -0.02 16 Total: 0.00 -18.53 352.87 0.52 -18.01 By element: Atomic # 1 Polarization: -12.32 SS G_CDS: -0.42 Total: -12.75 kcal Atomic # 6 Polarization: 0.35 SS G_CDS: 3.09 Total: 3.44 kcal Atomic # 7 Polarization: 2.46 SS G_CDS: -2.25 Total: 0.21 kcal Atomic # 8 Polarization: -9.37 SS G_CDS: -1.95 Total: -11.32 kcal Atomic # 14 Polarization: 0.36 SS G_CDS: 2.04 Total: 2.41 kcal Total: -18.53 0.52 -18.01 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_12335836.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.627 kcal (2) G-P(sol) polarization free energy of solvation -18.528 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.155 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.519 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.008 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.635 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds