Wall clock time and date at job start Tue Mar 9 2021 14:33:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 H 1.09001 * 109.47362 * 2 1 4 4 C 1.52997 * 109.47317 * 120.00732 * 2 1 3 5 5 C 1.53002 * 109.46817 * 179.97438 * 4 2 1 6 6 C 1.52996 * 109.46972 * 299.99733 * 5 4 2 7 7 H 1.09000 * 109.47380 * 299.99696 * 6 5 4 8 8 N 1.46510 * 109.46858 * 180.02562 * 6 5 4 9 9 C 1.34773 * 119.99925 * 155.00046 * 8 6 5 10 10 O 1.21555 * 120.00076 * 359.97438 * 9 8 6 11 11 C 1.47845 * 120.00226 * 179.97438 * 9 8 6 12 12 C 1.39544 * 120.13745 * 359.72324 * 11 9 8 13 13 C 1.38072 * 119.83972 * 179.76352 * 12 11 9 14 14 Br 1.89103 * 119.93680 * 180.25403 * 13 12 11 15 15 C 1.38422 * 120.12951 * 0.51782 * 13 12 11 16 16 C 1.38368 * 120.27491 * 359.73610 * 15 13 12 17 17 C 1.50699 * 119.91656 * 180.02562 * 16 15 13 18 18 O 1.42902 * 109.47265 * 244.97807 * 17 16 15 19 19 Si 1.86301 * 109.47517 * 4.97676 * 17 16 15 20 20 C 1.37936 * 120.16046 * 359.97438 * 16 15 13 21 21 C 1.52997 * 109.47131 * 60.00459 * 6 5 4 22 22 C 1.52999 * 109.46991 * 299.99311 * 21 6 5 23 23 H 1.09001 * 109.47362 * 180.02562 * 1 2 3 24 24 H 1.09002 * 109.46716 * 299.99359 * 1 2 3 25 25 H 1.09000 * 109.47486 * 59.99277 * 1 2 3 26 26 H 1.09002 * 109.47153 * 299.99641 * 4 2 1 27 27 H 1.08996 * 109.46952 * 59.99813 * 4 2 1 28 28 H 1.08996 * 109.47407 * 60.00219 * 5 4 2 29 29 H 1.09000 * 109.46986 * 179.97438 * 5 4 2 30 30 H 0.96994 * 119.99768 * 334.99990 * 8 6 5 31 31 H 1.08001 * 120.08104 * 0.02562 * 12 11 9 32 32 H 1.07997 * 119.86115 * 179.76193 * 15 13 12 33 33 H 1.08998 * 109.47472 * 124.97922 * 17 16 15 34 34 H 0.96696 * 113.99593 * 59.99527 * 18 17 16 35 35 H 1.48496 * 110.00186 * 180.02562 * 19 17 16 36 36 H 1.48508 * 109.99595 * 301.32416 * 19 17 16 37 37 H 1.08006 * 120.06459 * 180.02562 * 20 16 15 38 38 H 1.09002 * 109.47153 * 179.97438 * 21 6 5 39 39 H 1.08993 * 109.47194 * 60.00154 * 21 6 5 40 40 H 1.08993 * 109.47839 * 300.00447 * 22 21 6 41 41 H 1.09000 * 109.47160 * 180.02562 * 22 21 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0400 -0.7214 1.2491 5 6 3.5701 -0.7219 1.2487 6 6 4.0794 -1.4434 -0.0006 7 1 3.7158 -2.4709 -0.0005 8 7 5.5445 -1.4444 -0.0007 9 6 6.2177 -2.4008 -0.6703 10 8 5.6093 -3.2630 -1.2738 11 6 7.6961 -2.4016 -0.6709 12 6 8.3975 -1.4099 0.0161 13 6 9.7782 -1.4193 0.0155 14 35 10.7314 -0.0810 0.9515 15 6 10.4660 -2.4034 -0.6734 16 6 9.7757 -3.3860 -1.3607 17 6 10.5327 -4.4538 -2.1076 18 8 10.2792 -4.3262 -3.5082 19 14 12.3577 -4.2609 -1.7868 20 6 8.3964 -3.3912 -1.3630 21 6 3.5694 -0.7220 -1.2498 22 6 2.0394 -0.7215 -1.2494 23 1 -0.3634 -1.0277 0.0005 24 1 -0.3633 0.5138 0.8901 25 1 -0.3634 0.5139 -0.8899 26 1 1.6768 -0.2076 2.1392 27 1 1.6767 -1.7490 1.2490 28 1 3.9338 0.3056 1.2486 29 1 3.9335 -1.2354 2.1388 30 1 6.0299 -0.7566 0.4811 31 1 7.8617 -0.6394 0.5505 32 1 11.5460 -2.4043 -0.6742 33 1 10.2059 -5.4364 -1.7673 34 1 10.5458 -3.4743 -3.8800 35 1 13.1155 -5.3077 -2.5184 36 1 12.8093 -2.9132 -2.2173 37 1 7.8591 -4.1593 -1.8997 38 1 3.9326 -1.2357 -2.1398 39 1 3.9331 0.3055 -1.2499 40 1 1.6756 -1.7490 -1.2492 41 1 1.6760 -0.2080 -2.1395 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_12335870.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:33:36 Heat of formation + Delta-G solvation = -55.400023 kcal Electronic energy + Delta-G solvation = -23160.250942 eV Core-core repulsion = 19665.838184 eV Total energy + Delta-G solvation = -3494.412759 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 354.062 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -41.65944 -40.44349 -39.17781 -37.81924 -35.79365 -33.66695 -33.47590 -31.86206 -31.75688 -30.51451 -27.34634 -26.98678 -24.99347 -23.81832 -22.86903 -22.27351 -21.44733 -20.75994 -19.19626 -18.10549 -17.65896 -17.41962 -16.68455 -16.42573 -16.22927 -15.77843 -15.58281 -15.30587 -15.26970 -15.05415 -14.90751 -14.40979 -14.28459 -14.07403 -13.71240 -13.32537 -13.27500 -13.20569 -13.03882 -12.62477 -12.30698 -12.16833 -12.02324 -11.97022 -11.83359 -11.74716 -11.49325 -11.37623 -11.18989 -11.01220 -10.71171 -10.37427 -10.09275 -9.95123 -5.07916 -0.52873 -0.20895 0.36944 1.12023 1.46898 1.57774 1.85076 1.98479 2.48641 3.16504 3.27095 3.36196 3.59602 3.64268 3.70880 3.81639 3.85768 3.93223 4.00842 4.12284 4.17307 4.23423 4.33351 4.40109 4.44867 4.47663 4.49365 4.68901 4.69566 4.73009 4.86231 4.89816 4.92250 4.97396 5.04197 5.09226 5.12291 5.18515 5.25213 5.32442 5.34899 5.43000 5.49278 6.27450 6.36479 7.09770 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.095 4.095 3 H 0.071 0.929 4 C -0.111 4.111 5 C -0.127 4.127 6 C 0.145 3.855 7 H 0.091 0.909 8 N -0.722 5.722 9 C 0.561 3.439 10 O -0.526 6.526 11 C -0.127 4.127 12 C -0.053 4.053 13 C -0.094 4.094 14 Br -0.033 7.033 15 C -0.066 4.066 16 C -0.117 4.117 17 C -0.074 4.074 18 O -0.524 6.524 19 Si 0.682 3.318 20 C -0.017 4.017 21 C -0.130 4.130 22 C -0.112 4.112 23 H 0.055 0.945 24 H 0.055 0.945 25 H 0.055 0.945 26 H 0.069 0.931 27 H 0.067 0.933 28 H 0.069 0.931 29 H 0.070 0.930 30 H 0.399 0.601 31 H 0.138 0.862 32 H 0.142 0.858 33 H 0.125 0.875 34 H 0.377 0.623 35 H -0.251 1.251 36 H -0.256 1.256 37 H 0.148 0.852 38 H 0.068 0.932 39 H 0.064 0.936 40 H 0.066 0.934 41 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.537 2.698 3.719 4.626 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.149 4.149 5 C -0.165 4.165 6 C 0.042 3.958 7 H 0.109 0.891 8 N -0.374 5.374 9 C 0.348 3.652 10 O -0.403 6.403 11 C -0.131 4.131 12 C -0.074 4.074 13 C -0.174 4.174 14 Br 0.053 6.947 15 C -0.085 4.085 16 C -0.119 4.119 17 C -0.184 4.184 18 O -0.330 6.330 19 Si 0.582 3.418 20 C -0.036 4.036 21 C -0.168 4.168 22 C -0.150 4.150 23 H 0.074 0.926 24 H 0.074 0.926 25 H 0.074 0.926 26 H 0.088 0.912 27 H 0.085 0.915 28 H 0.087 0.913 29 H 0.089 0.911 30 H 0.234 0.766 31 H 0.156 0.844 32 H 0.160 0.840 33 H 0.143 0.857 34 H 0.225 0.775 35 H -0.175 1.175 36 H -0.180 1.180 37 H 0.166 0.834 38 H 0.087 0.913 39 H 0.083 0.917 40 H 0.084 0.916 41 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 1.003 2.121 3.372 4.108 hybrid contribution -0.362 0.787 -0.869 1.227 sum 0.641 2.909 2.503 3.890 Atomic orbital electron populations 1.21836 0.94950 1.02028 1.01854 1.21189 0.95769 0.99654 0.94709 0.91095 1.21547 0.93905 1.01361 0.98090 1.21820 0.96829 1.00913 0.96961 1.21077 0.78178 1.01284 0.95306 0.89069 1.46022 1.07656 1.30345 1.53337 1.18101 0.86636 0.81477 0.78981 1.90823 1.69448 1.37122 1.42890 1.19991 0.93320 0.97761 1.02077 1.21290 0.92358 0.97262 0.96484 1.21643 0.94483 0.97878 1.03396 1.96845 1.74393 1.49443 1.74061 1.21269 1.00376 0.92391 0.94501 1.20307 0.94283 0.97448 0.99828 1.25059 1.10476 1.00320 0.82520 1.86650 1.85046 1.40901 1.20438 0.95029 0.74001 0.80895 0.91831 1.21308 0.92966 0.96166 0.93199 1.21923 0.96121 1.00736 0.98044 1.21564 0.94451 1.01179 0.97836 0.92553 0.92588 0.92566 0.91229 0.91476 0.91251 0.91086 0.76565 0.84399 0.84034 0.85686 0.77496 1.17519 1.18030 0.83415 0.91313 0.91718 0.91563 0.91504 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.18 9.19 37.16 0.34 0.52 16 2 C -0.09 0.12 2.72 -90.62 -0.25 -0.12 16 3 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 4 C -0.11 0.19 5.20 -26.73 -0.14 0.05 16 5 C -0.13 0.26 5.39 -26.73 -0.14 0.12 16 6 C 0.15 -0.05 2.45 -67.93 -0.17 -0.21 16 7 H 0.09 0.15 7.58 -51.93 -0.39 -0.24 16 8 N -0.72 0.44 5.03 -54.75 -0.28 0.16 16 9 C 0.56 1.14 7.74 -12.33 -0.10 1.04 16 10 O -0.53 -3.02 16.01 5.32 0.09 -2.94 16 11 C -0.13 -0.07 5.87 -104.97 -0.62 -0.69 16 12 C -0.05 0.06 9.28 -39.16 -0.36 -0.30 16 13 C -0.09 0.07 6.22 -39.57 -0.25 -0.18 16 14 Br -0.03 0.02 33.69 -68.01 -2.29 -2.27 16 15 C -0.07 0.07 8.40 -39.47 -0.33 -0.27 16 16 C -0.12 0.07 5.34 -104.69 -0.56 -0.49 16 17 C -0.07 0.07 2.80 36.01 0.10 0.17 16 18 O -0.52 -0.35 12.83 -35.23 -0.45 -0.81 16 19 Si 0.68 -1.15 29.87 -169.99 -5.08 -6.23 16 20 C -0.02 -0.01 9.23 -39.19 -0.36 -0.38 16 21 C -0.13 0.00 5.50 -26.73 -0.15 -0.14 16 22 C -0.11 0.06 5.20 -26.73 -0.14 -0.08 16 23 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 24 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 25 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 26 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 27 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 29 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 30 H 0.40 -1.24 6.64 -40.82 -0.27 -1.51 16 31 H 0.14 -0.46 6.41 -52.49 -0.34 -0.80 16 32 H 0.14 -0.32 4.82 -52.49 -0.25 -0.57 16 33 H 0.13 -0.22 7.96 -51.93 -0.41 -0.63 16 34 H 0.38 -0.84 8.70 45.56 0.40 -0.44 16 35 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 36 H -0.26 0.00 7.01 56.52 0.40 0.40 16 37 H 0.15 0.26 7.65 -52.48 -0.40 -0.14 16 38 H 0.07 0.14 8.14 -51.93 -0.42 -0.29 16 39 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 40 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 41 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 LS Contribution 349.54 15.07 5.27 5.27 Total: 0.00 -5.77 349.54 -11.81 -17.57 By element: Atomic # 1 Polarization: -3.84 SS G_CDS: -5.95 Total: -9.79 kcal Atomic # 6 Polarization: 2.14 SS G_CDS: -3.11 Total: -0.97 kcal Atomic # 7 Polarization: 0.44 SS G_CDS: -0.28 Total: 0.16 kcal Atomic # 8 Polarization: -3.38 SS G_CDS: -0.37 Total: -3.74 kcal Atomic # 14 Polarization: -1.15 SS G_CDS: -5.08 Total: -6.23 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -2.29 Total: -2.27 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -5.77 -11.81 -17.57 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_12335870.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.827 kcal (2) G-P(sol) polarization free energy of solvation -5.766 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.593 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.807 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.573 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.400 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds