Wall clock time and date at job start Tue Mar 9 2021 14:34:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 H 1.09001 * 109.47114 * 2 1 4 4 C 1.53002 * 109.47219 * 120.00277 * 2 1 3 5 5 C 1.53000 * 109.46846 * 180.02562 * 4 2 1 6 6 C 1.53004 * 109.47054 * 299.99693 * 5 4 2 7 7 H 1.09001 * 109.47158 * 300.00231 * 6 5 4 8 8 N 1.46499 * 109.46894 * 179.97438 * 6 5 4 9 9 C 1.34777 * 119.99790 * 154.99969 * 8 6 5 10 10 O 1.21572 * 119.99932 * 0.02562 * 9 8 6 11 11 C 1.47718 * 119.99940 * 180.02562 * 9 8 6 12 12 C 1.39708 * 120.02292 * 179.97438 * 11 9 8 13 13 C 1.37671 * 119.97266 * 179.72401 * 12 11 9 14 14 C 1.39494 * 120.02704 * 0.26179 * 13 12 11 15 15 C 1.48273 * 119.97874 * 180.02562 * 14 13 12 16 16 C 1.39405 * 120.12550 * 359.72071 * 15 14 13 17 17 C 1.38009 * 119.87037 * 179.79304 * 16 15 14 18 18 C 1.38328 * 120.12683 * 0.48413 * 17 16 15 19 19 C 1.50702 * 119.87237 * 179.72352 * 18 17 16 20 20 O 1.42901 * 109.47005 * 245.02420 * 19 18 17 21 21 Si 1.86297 * 109.46834 * 5.02283 * 19 18 17 22 22 C 1.38337 * 120.25848 * 359.74825 * 18 17 16 23 23 C 1.38005 * 120.12464 * 0.02562 * 22 18 17 24 24 C 1.39503 * 120.04813 * 359.97438 * 14 13 12 25 25 C 1.37667 * 120.02547 * 0.02562 * 24 14 13 26 26 C 1.53002 * 109.47044 * 60.00428 * 6 5 4 27 27 C 1.53000 * 109.46846 * 299.99699 * 26 6 5 28 28 H 1.09002 * 109.47121 * 299.99482 * 1 2 3 29 29 H 1.08994 * 109.47586 * 59.99730 * 1 2 3 30 30 H 1.09001 * 109.47114 * 179.97438 * 1 2 3 31 31 H 1.08996 * 109.46880 * 59.99978 * 4 2 1 32 32 H 1.08998 * 109.46822 * 299.99966 * 4 2 1 33 33 H 1.09001 * 109.46605 * 179.97438 * 5 4 2 34 34 H 1.09001 * 109.47326 * 59.99821 * 5 4 2 35 35 H 0.97000 * 120.00435 * 335.00483 * 8 6 5 36 36 H 1.08002 * 120.01575 * 0.02562 * 12 11 9 37 37 H 1.08003 * 119.98193 * 180.22862 * 13 12 11 38 38 H 1.07994 * 120.06365 * 0.02562 * 16 15 14 39 39 H 1.07999 * 119.93248 * 180.23326 * 17 16 15 40 40 H 1.08993 * 109.47101 * 125.02393 * 19 18 17 41 41 H 0.96698 * 113.99699 * 59.99979 * 20 19 18 42 42 H 1.48509 * 110.00237 * 58.68294 * 21 19 18 43 43 H 1.48497 * 110.00006 * 180.02562 * 21 19 18 44 44 H 1.07996 * 119.93507 * 179.97438 * 22 18 17 45 45 H 1.08002 * 120.06057 * 179.97438 * 23 22 18 46 46 H 1.08000 * 119.98990 * 179.97438 * 24 14 13 47 47 H 1.07997 * 120.01352 * 180.02562 * 25 24 14 48 48 H 1.09002 * 109.47422 * 59.99352 * 26 6 5 49 49 H 1.08990 * 109.47094 * 180.02562 * 26 6 5 50 50 H 1.08996 * 109.47425 * 299.99720 * 27 26 6 51 51 H 1.09004 * 109.47038 * 179.97438 * 27 26 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0400 -0.7213 1.2492 5 6 3.5700 -0.7207 1.2494 6 6 4.0805 -1.4416 0.0001 7 1 3.7175 -2.4694 -0.0001 8 7 5.5455 -1.4405 0.0001 9 6 6.2201 -2.3961 -0.6694 10 8 5.6128 -3.2587 -1.2736 11 6 7.6972 -2.3953 -0.6690 12 6 8.3970 -3.3859 -1.3624 13 6 9.7737 -3.3809 -1.3660 14 6 10.4700 -2.3904 -0.6733 15 6 11.9527 -2.3857 -0.6784 16 6 12.6531 -3.3731 -1.3697 17 6 14.0331 -3.3612 -1.3745 18 6 14.7214 -2.3779 -0.6868 19 6 16.2284 -2.3740 -0.6908 20 8 16.7088 -2.6093 0.6344 21 14 16.8498 -3.7158 -1.8240 22 6 14.0317 -1.3983 0.0050 23 6 12.6517 -1.3974 0.0130 24 6 9.7723 -1.4036 0.0235 25 6 8.3956 -1.4066 0.0286 26 6 3.5705 -0.7203 -1.2491 27 6 2.0405 -0.7209 -1.2493 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 1.6767 -1.7489 1.2491 32 1 1.6767 -0.2075 2.1392 33 1 3.9333 -1.2342 2.1397 34 1 3.9330 0.3071 1.2497 35 1 6.0300 -0.7520 0.4819 36 1 7.8582 -4.1526 -1.8994 37 1 10.3148 -4.1446 -1.9051 38 1 12.1168 -4.1436 -1.9036 39 1 14.5767 -4.1234 -1.9129 40 1 16.5883 -1.4068 -1.0413 41 1 16.4266 -3.4541 1.0108 42 1 16.3310 -3.5002 -3.1987 43 1 18.3347 -3.7229 -1.8363 44 1 14.5743 -0.6334 0.5404 45 1 12.1143 -0.6324 0.5537 46 1 10.3123 -0.6374 0.5599 47 1 7.8557 -0.6423 0.5677 48 1 3.9334 0.3076 -1.2488 49 1 3.9337 -1.2341 -2.1390 50 1 1.6775 -1.7486 -1.2496 51 1 1.6771 -0.2066 -2.1390 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_13158362.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:34:05 Heat of formation + Delta-G solvation = -34.433497 kcal Electronic energy + Delta-G solvation = -29412.803395 eV Core-core repulsion = 25435.138016 eV Total energy + Delta-G solvation = -3977.665379 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.183 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.51753 -40.85537 -39.79692 -38.87685 -37.55069 -35.71337 -34.12408 -32.77923 -32.20292 -31.80964 -31.60232 -30.65709 -27.44529 -26.51832 -24.73465 -24.40523 -23.78369 -22.73261 -22.53113 -21.92031 -21.27883 -20.76953 -19.25389 -18.46762 -17.77787 -17.41725 -16.91654 -16.36935 -16.33346 -16.05140 -15.93461 -15.55679 -15.43688 -15.28220 -15.23275 -15.07450 -14.98562 -14.87208 -14.43040 -14.27667 -14.17270 -14.08035 -13.75334 -13.52215 -13.28143 -13.23400 -13.15222 -12.79206 -12.61129 -12.56712 -12.14273 -12.05171 -12.02762 -11.94523 -11.71221 -11.67847 -11.35361 -11.15138 -10.82887 -10.77762 -10.45949 -10.11510 -10.04632 -10.03816 -9.11894 -5.08052 -0.70917 0.28678 0.31848 0.48690 1.24053 1.59335 1.87376 1.93622 2.10274 2.58955 2.97611 3.33524 3.43818 3.51510 3.58791 3.64186 3.67054 3.74515 3.77256 3.88688 3.89907 3.95158 4.04368 4.15352 4.18187 4.20663 4.27535 4.35938 4.42930 4.43045 4.47381 4.51789 4.56288 4.62224 4.70960 4.75006 4.79083 4.84521 4.87882 4.94677 4.97342 5.00487 5.07453 5.11369 5.13501 5.14903 5.20136 5.24077 5.27940 5.34613 5.36823 5.41553 5.47178 5.53189 5.58506 5.74991 5.83934 6.48288 6.51062 7.22643 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.095 4.095 3 H 0.070 0.930 4 C -0.111 4.111 5 C -0.127 4.127 6 C 0.145 3.855 7 H 0.090 0.910 8 N -0.724 5.724 9 C 0.559 3.441 10 O -0.533 6.533 11 C -0.136 4.136 12 C -0.054 4.054 13 C -0.118 4.118 14 C -0.018 4.018 15 C -0.049 4.049 16 C -0.100 4.100 17 C -0.113 4.113 18 C -0.114 4.114 19 C -0.069 4.069 20 O -0.539 6.539 21 Si 0.685 3.315 22 C -0.090 4.090 23 C -0.105 4.105 24 C -0.118 4.118 25 C -0.082 4.082 26 C -0.129 4.129 27 C -0.112 4.112 28 H 0.055 0.945 29 H 0.055 0.945 30 H 0.055 0.945 31 H 0.066 0.934 32 H 0.068 0.932 33 H 0.070 0.930 34 H 0.068 0.932 35 H 0.399 0.601 36 H 0.140 0.860 37 H 0.135 0.865 38 H 0.132 0.868 39 H 0.130 0.870 40 H 0.114 0.886 41 H 0.379 0.621 42 H -0.257 1.257 43 H -0.254 1.254 44 H 0.129 0.871 45 H 0.129 0.871 46 H 0.133 0.867 47 H 0.128 0.872 48 H 0.064 0.936 49 H 0.068 0.932 50 H 0.065 0.935 51 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.261 0.949 2.536 2.721 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.149 4.149 5 C -0.165 4.165 6 C 0.041 3.959 7 H 0.108 0.892 8 N -0.375 5.375 9 C 0.347 3.653 10 O -0.411 6.411 11 C -0.139 4.139 12 C -0.073 4.073 13 C -0.136 4.136 14 C -0.018 4.018 15 C -0.049 4.049 16 C -0.118 4.118 17 C -0.131 4.131 18 C -0.115 4.115 19 C -0.180 4.180 20 O -0.345 6.345 21 Si 0.587 3.413 22 C -0.108 4.108 23 C -0.123 4.123 24 C -0.136 4.136 25 C -0.101 4.101 26 C -0.168 4.168 27 C -0.150 4.150 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.085 0.915 32 H 0.087 0.913 33 H 0.088 0.912 34 H 0.087 0.913 35 H 0.234 0.766 36 H 0.158 0.842 37 H 0.152 0.848 38 H 0.150 0.850 39 H 0.147 0.853 40 H 0.131 0.869 41 H 0.227 0.773 42 H -0.182 1.182 43 H -0.179 1.179 44 H 0.147 0.853 45 H 0.147 0.853 46 H 0.151 0.849 47 H 0.146 0.854 48 H 0.082 0.918 49 H 0.087 0.913 50 H 0.084 0.916 51 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 0.026 0.720 1.288 1.475 hybrid contribution 0.056 1.076 0.310 1.121 sum 0.082 1.795 1.597 2.404 Atomic orbital electron populations 1.21833 0.94963 1.02014 1.01831 1.21189 0.95744 0.99646 0.94743 0.91127 1.21545 0.93964 1.01335 0.98053 1.21818 0.96773 1.00872 0.97028 1.21047 0.78505 1.01159 0.95163 0.89189 1.46020 1.07444 1.30520 1.53546 1.18272 0.87135 0.81216 0.78691 1.90798 1.69868 1.37258 1.43156 1.20000 0.92791 0.98513 1.02596 1.21234 0.93647 0.96782 0.95644 1.21246 0.93831 0.98756 0.99741 1.18982 0.91769 0.94859 0.96223 1.18820 0.91450 0.96031 0.98569 1.21232 0.93804 0.98183 0.98603 1.20941 0.94374 0.98163 0.99580 1.20454 0.96185 0.96143 0.98683 1.25074 0.91813 1.08983 0.92159 1.86514 1.75528 1.43568 1.28848 0.94757 0.80754 0.86754 0.78999 1.20974 0.93647 0.98131 0.98087 1.21316 0.94161 0.98109 0.98686 1.21160 0.93799 0.98809 0.99846 1.21199 0.94324 0.97191 0.97363 1.21923 0.96036 1.00704 0.98134 1.21565 0.94530 1.01140 0.97790 0.92600 0.92582 0.92562 0.91493 0.91289 0.91159 0.91318 0.76594 0.84233 0.84752 0.85007 0.85260 0.86866 0.77321 1.18195 1.17884 0.85312 0.85304 0.84939 0.85437 0.91774 0.91322 0.91586 0.91544 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.15 9.19 37.16 0.34 0.50 16 2 C -0.09 0.10 2.72 -90.62 -0.25 -0.15 16 3 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 4 C -0.11 0.16 5.20 -26.73 -0.14 0.02 16 5 C -0.13 0.21 5.39 -26.73 -0.14 0.07 16 6 C 0.15 0.02 2.45 -67.93 -0.17 -0.15 16 7 H 0.09 0.20 7.58 -51.93 -0.39 -0.20 16 8 N -0.72 0.05 5.03 -54.79 -0.28 -0.23 16 9 C 0.56 1.51 7.73 -12.39 -0.10 1.42 16 10 O -0.53 -3.40 16.00 5.30 0.08 -3.31 16 11 C -0.14 -0.17 5.88 -104.93 -0.62 -0.79 16 12 C -0.05 -0.07 9.58 -39.24 -0.38 -0.45 16 13 C -0.12 -0.01 9.41 -39.32 -0.37 -0.38 16 14 C -0.02 0.00 5.88 -104.83 -0.62 -0.62 16 15 C -0.05 0.00 5.88 -104.90 -0.62 -0.62 16 16 C -0.10 0.07 9.43 -39.23 -0.37 -0.30 16 17 C -0.11 0.11 8.65 -39.63 -0.34 -0.23 16 18 C -0.11 0.04 5.36 -104.55 -0.56 -0.52 16 19 C -0.07 0.04 2.80 36.01 0.10 0.14 16 20 O -0.54 0.04 12.83 -35.23 -0.45 -0.42 16 21 Si 0.69 -0.88 29.79 -169.99 -5.06 -5.94 16 22 C -0.09 0.01 9.67 -39.63 -0.38 -0.38 16 23 C -0.10 0.04 9.43 -39.23 -0.37 -0.33 16 24 C -0.12 0.09 9.41 -39.32 -0.37 -0.28 16 25 C -0.08 0.07 9.52 -39.24 -0.37 -0.30 16 26 C -0.13 -0.05 5.49 -26.73 -0.15 -0.19 16 27 C -0.11 0.03 5.21 -26.73 -0.14 -0.11 16 28 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.06 -0.05 8.14 -51.93 -0.42 -0.48 16 30 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 31 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 32 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 33 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 34 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 35 H 0.40 -1.07 6.62 -40.82 -0.27 -1.34 16 36 H 0.14 0.20 7.64 -52.49 -0.40 -0.20 16 37 H 0.13 -0.26 6.19 -52.48 -0.32 -0.58 16 38 H 0.13 -0.33 6.19 -52.49 -0.33 -0.66 16 39 H 0.13 -0.37 4.89 -52.49 -0.26 -0.63 16 40 H 0.11 -0.02 7.96 -51.93 -0.41 -0.43 16 41 H 0.38 -1.47 8.70 45.56 0.40 -1.07 16 42 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 43 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 44 H 0.13 -0.09 8.06 -52.49 -0.42 -0.51 16 45 H 0.13 -0.28 6.19 -52.49 -0.33 -0.61 16 46 H 0.13 -0.37 6.19 -52.49 -0.32 -0.69 16 47 H 0.13 -0.46 6.39 -52.49 -0.34 -0.80 16 48 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 49 H 0.07 0.16 8.14 -51.93 -0.42 -0.26 16 50 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 51 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 LS Contribution 402.42 15.07 6.06 6.06 Total: 0.00 -7.54 402.42 -13.31 -20.85 By element: Atomic # 1 Polarization: -5.70 SS G_CDS: -7.67 Total: -13.36 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: -6.00 Total: -3.64 kcal Atomic # 7 Polarization: 0.05 SS G_CDS: -0.28 Total: -0.23 kcal Atomic # 8 Polarization: -3.36 SS G_CDS: -0.37 Total: -3.73 kcal Atomic # 14 Polarization: -0.88 SS G_CDS: -5.06 Total: -5.94 kcal Total LS contribution 6.06 Total: 6.06 kcal Total: -7.54 -13.31 -20.85 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_13158362.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.587 kcal (2) G-P(sol) polarization free energy of solvation -7.538 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.125 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.309 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.846 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.433 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds