Wall clock time and date at job start Tue Mar 9 2021 14:34:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 H 1.08992 * 109.47514 * 2 1 4 4 C 1.53002 * 109.46637 * 119.99871 * 2 1 3 5 5 C 1.52997 * 109.46817 * 179.97438 * 4 2 1 6 6 C 1.53005 * 109.47452 * 300.00239 * 5 4 2 7 7 H 1.09002 * 109.46935 * 300.00125 * 6 5 4 8 8 N 1.46496 * 109.47414 * 180.02562 * 6 5 4 9 9 C 1.34778 * 120.00072 * 154.99744 * 8 6 5 10 10 O 1.21504 * 120.00215 * 359.97438 * 9 8 6 11 11 C 1.48178 * 119.99729 * 179.97438 * 9 8 6 12 12 N 1.32714 * 119.72215 * 0.02562 * 11 9 8 13 13 C 1.31526 * 121.64077 * 180.02562 * 12 11 9 14 14 C 1.38558 * 120.89985 * 359.97438 * 13 12 11 15 15 C 1.50702 * 120.32138 * 180.02562 * 14 13 12 16 16 O 1.42893 * 109.47191 * 244.99913 * 15 14 13 17 17 Si 1.86302 * 109.47042 * 4.99880 * 15 14 13 18 18 C 1.38619 * 119.35523 * 0.02562 * 14 13 12 19 19 C 1.38589 * 118.49012 * 359.73389 * 18 14 13 20 20 C 1.52999 * 109.47159 * 59.99536 * 6 5 4 21 21 C 1.52997 * 109.47317 * 300.00546 * 20 6 5 22 22 H 1.09002 * 109.47508 * 180.02562 * 1 2 3 23 23 H 1.09000 * 109.47437 * 300.00603 * 1 2 3 24 24 H 1.09001 * 109.47109 * 59.99814 * 1 2 3 25 25 H 1.08993 * 109.47662 * 299.99908 * 4 2 1 26 26 H 1.09002 * 109.47075 * 60.00414 * 4 2 1 27 27 H 1.09002 * 109.47153 * 60.00231 * 5 4 2 28 28 H 1.09001 * 109.47289 * 180.02562 * 5 4 2 29 29 H 0.97007 * 119.99693 * 334.99885 * 8 6 5 30 30 H 1.07997 * 119.54654 * 179.97438 * 13 12 11 31 31 H 1.09004 * 109.47351 * 124.99946 * 15 14 13 32 32 H 0.96707 * 114.00059 * 59.99741 * 16 15 14 33 33 H 1.48505 * 109.99770 * 180.02562 * 17 15 14 34 34 H 1.48496 * 110.00096 * 301.32056 * 17 15 14 35 35 H 1.08000 * 120.75602 * 179.97438 * 18 14 13 36 36 H 1.08001 * 120.47345 * 180.28682 * 19 18 14 37 37 H 1.08996 * 109.46929 * 179.97438 * 20 6 5 38 38 H 1.09002 * 109.46716 * 60.00455 * 20 6 5 39 39 H 1.09002 * 109.47153 * 299.99641 * 21 20 6 40 40 H 1.09001 * 109.46832 * 179.97438 * 21 20 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0399 -0.7213 1.2493 5 6 3.5699 -0.7218 1.2490 6 6 4.0795 -1.4434 -0.0002 7 1 3.7157 -2.4710 0.0000 8 7 5.5444 -1.4445 -0.0002 9 6 6.2176 -2.4012 -0.6696 10 8 5.6095 -3.2630 -1.2728 11 6 7.6994 -2.4019 -0.6700 12 7 8.3580 -1.4582 -0.0089 13 6 9.6726 -1.4225 0.0156 14 6 10.4229 -2.3765 -0.6526 15 6 11.9285 -2.3235 -0.6153 16 8 12.4290 -2.0721 -1.9299 17 14 12.4736 -0.9576 0.5284 18 6 9.7752 -3.3803 -1.3558 19 6 8.3894 -3.3960 -1.3601 20 6 3.5695 -0.7223 -1.2495 21 6 2.0395 -0.7217 -1.2492 22 1 -0.3634 -1.0277 0.0005 23 1 -0.3634 0.5139 0.8899 24 1 -0.3633 0.5139 -0.8900 25 1 1.6766 -0.2075 2.1393 26 1 1.6766 -1.7489 1.2493 27 1 3.9336 0.3057 1.2488 28 1 3.9332 -1.2361 2.1388 29 1 6.0299 -0.7567 0.4817 30 1 10.1739 -0.6388 0.5642 31 1 12.3169 -3.2760 -0.2547 32 1 12.1235 -1.2390 -2.3145 33 1 13.9566 -0.8945 0.5734 34 1 11.9242 0.3420 0.0655 35 1 10.3377 -4.1352 -1.8851 36 1 7.8520 -4.1660 -1.8937 37 1 3.9329 -1.2361 -2.1394 38 1 3.9332 0.3053 -1.2497 39 1 1.6758 -1.7492 -1.2490 40 1 1.6762 -0.2075 -2.1390 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_13287726.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:34:20 Heat of formation + Delta-G solvation = -47.597049 kcal Electronic energy + Delta-G solvation = -21283.049324 eV Core-core repulsion = 18063.367020 eV Total energy + Delta-G solvation = -3219.682305 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 277.146 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -41.89092 -40.66530 -39.20303 -38.06237 -35.70472 -33.94924 -33.01840 -31.95861 -31.77713 -28.14398 -26.61942 -25.06487 -23.93295 -23.72377 -22.34574 -21.53283 -20.85782 -19.17111 -18.73827 -17.88717 -16.96714 -16.73257 -16.56091 -16.20808 -16.10085 -15.66005 -15.26461 -15.23272 -15.03391 -14.57623 -14.44425 -14.34724 -14.08852 -13.68548 -13.47262 -13.22575 -13.17121 -12.72407 -12.57304 -12.16240 -12.11236 -11.94894 -11.72120 -11.35167 -11.20453 -11.10682 -11.08993 -10.79559 -10.61233 -10.35338 -9.98014 -5.11752 -0.57626 0.04623 1.07360 1.43112 1.65432 1.82252 2.03326 2.69880 2.94150 3.16262 3.40865 3.60324 3.65918 3.69083 3.71621 3.89105 3.92401 4.06561 4.12828 4.17594 4.32910 4.39355 4.44497 4.50400 4.52252 4.54767 4.72062 4.77499 4.83097 4.89904 4.94176 4.97621 5.04790 5.13962 5.16770 5.22404 5.29541 5.34329 5.37763 5.48857 5.55143 6.19045 6.35755 6.64971 7.18046 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.095 4.095 3 H 0.071 0.929 4 C -0.111 4.111 5 C -0.126 4.126 6 C 0.143 3.857 7 H 0.090 0.910 8 N -0.707 5.707 9 C 0.572 3.428 10 O -0.529 6.529 11 C 0.081 3.919 12 N -0.453 5.453 13 C 0.101 3.899 14 C -0.149 4.149 15 C -0.074 4.074 16 O -0.526 6.526 17 Si 0.687 3.313 18 C -0.053 4.053 19 C -0.109 4.109 20 C -0.130 4.130 21 C -0.112 4.112 22 H 0.055 0.945 23 H 0.055 0.945 24 H 0.055 0.945 25 H 0.069 0.931 26 H 0.066 0.934 27 H 0.070 0.930 28 H 0.071 0.929 29 H 0.411 0.589 30 H 0.164 0.836 31 H 0.125 0.875 32 H 0.378 0.622 33 H -0.251 1.251 34 H -0.255 1.255 35 H 0.147 0.853 36 H 0.152 0.848 37 H 0.067 0.933 38 H 0.064 0.936 39 H 0.066 0.934 40 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.519 1.903 3.178 3.740 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.149 4.149 5 C -0.164 4.164 6 C 0.040 3.960 7 H 0.108 0.892 8 N -0.358 5.358 9 C 0.357 3.643 10 O -0.404 6.404 11 C -0.057 4.057 12 N -0.164 5.164 13 C -0.058 4.058 14 C -0.151 4.151 15 C -0.184 4.184 16 O -0.332 6.332 17 Si 0.587 3.413 18 C -0.078 4.078 19 C -0.129 4.129 20 C -0.168 4.168 21 C -0.150 4.150 22 H 0.074 0.926 23 H 0.074 0.926 24 H 0.074 0.926 25 H 0.087 0.913 26 H 0.085 0.915 27 H 0.088 0.912 28 H 0.089 0.911 29 H 0.247 0.753 30 H 0.181 0.819 31 H 0.143 0.857 32 H 0.226 0.774 33 H -0.176 1.176 34 H -0.180 1.180 35 H 0.165 0.835 36 H 0.170 0.830 37 H 0.086 0.914 38 H 0.083 0.917 39 H 0.084 0.916 40 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 0.272 2.092 3.368 3.974 hybrid contribution 0.664 0.010 -1.410 1.559 sum 0.936 2.102 1.958 3.021 Atomic orbital electron populations 1.21835 0.94986 1.01998 1.01826 1.21189 0.95719 0.99690 0.94745 0.91083 1.21549 0.93995 1.01301 0.98046 1.21811 0.96648 1.01024 0.96961 1.21097 0.78423 1.01181 0.95349 0.89172 1.45934 1.07309 1.30154 1.52359 1.17856 0.85565 0.81673 0.79221 1.90812 1.68623 1.37536 1.43469 1.21216 0.94337 0.93192 0.96925 1.67535 1.09968 1.22593 1.16312 1.22678 0.89203 0.97265 0.96652 1.21576 0.97919 0.96660 0.98991 1.25018 0.90306 1.11628 0.91453 1.86640 1.73239 1.44346 1.28965 0.94976 0.81938 0.76880 0.87507 1.21564 0.93687 0.97120 0.95471 1.22232 0.94534 0.98632 0.97531 1.21924 0.96066 1.00810 0.98012 1.21562 0.94476 1.01137 0.97817 0.92569 0.92599 0.92597 0.91251 0.91515 0.91172 0.91074 0.75312 0.81907 0.85736 0.77433 1.17589 1.17969 0.83484 0.82980 0.91381 0.91682 0.91574 0.91544 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.14 9.19 37.16 0.34 0.48 16 2 C -0.09 0.09 2.72 -90.62 -0.25 -0.16 16 3 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 4 C -0.11 0.14 5.20 -26.73 -0.14 0.00 16 5 C -0.13 0.16 5.39 -26.73 -0.14 0.01 16 6 C 0.14 0.07 2.45 -67.93 -0.17 -0.09 16 7 H 0.09 0.20 7.58 -51.93 -0.39 -0.20 16 8 N -0.71 -0.66 5.07 -54.65 -0.28 -0.94 16 9 C 0.57 1.80 7.78 -12.18 -0.09 1.71 16 10 O -0.53 -3.18 15.99 5.36 0.09 -3.09 16 11 C 0.08 0.16 6.75 -83.01 -0.56 -0.40 16 12 N -0.45 -0.45 9.54 -9.80 -0.09 -0.55 16 13 C 0.10 -0.07 9.84 -17.56 -0.17 -0.25 16 14 C -0.15 0.17 5.37 -104.36 -0.56 -0.39 16 15 C -0.07 0.15 2.82 36.01 0.10 0.25 16 16 O -0.53 0.19 12.84 -35.23 -0.45 -0.26 16 17 Si 0.69 -1.80 29.91 -169.99 -5.08 -6.88 16 18 C -0.05 0.03 9.83 -39.31 -0.39 -0.36 16 19 C -0.11 -0.10 9.63 -39.05 -0.38 -0.48 16 20 C -0.13 -0.08 5.50 -26.73 -0.15 -0.22 16 21 C -0.11 0.02 5.20 -26.73 -0.14 -0.12 16 22 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 23 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 24 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 25 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 26 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.41 -0.18 7.93 -40.82 -0.32 -0.51 16 30 H 0.16 -0.47 4.86 -52.49 -0.25 -0.73 16 31 H 0.12 -0.36 7.96 -51.93 -0.41 -0.77 16 32 H 0.38 -1.16 8.70 45.56 0.40 -0.77 16 33 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 34 H -0.25 0.23 7.01 56.52 0.40 0.62 16 35 H 0.15 -0.28 8.06 -52.49 -0.42 -0.71 16 36 H 0.15 0.10 7.64 -52.49 -0.40 -0.30 16 37 H 0.07 0.16 8.14 -51.93 -0.42 -0.26 16 38 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 39 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 40 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 LS Contribution 325.56 15.07 4.91 4.91 Total: 0.00 -5.81 325.56 -9.69 -15.50 By element: Atomic # 1 Polarization: -2.56 SS G_CDS: -6.09 Total: -8.65 kcal Atomic # 6 Polarization: 2.66 SS G_CDS: -2.69 Total: -0.03 kcal Atomic # 7 Polarization: -1.12 SS G_CDS: -0.37 Total: -1.49 kcal Atomic # 8 Polarization: -2.99 SS G_CDS: -0.37 Total: -3.36 kcal Atomic # 14 Polarization: -1.80 SS G_CDS: -5.08 Total: -6.88 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -5.81 -9.69 -15.50 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_13287726.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -32.093 kcal (2) G-P(sol) polarization free energy of solvation -5.811 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.904 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.694 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.505 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.597 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds