Wall clock time and date at job start Tue Mar 9 2021 14:34:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.08998 * 109.47533 * 2 1 4 4 C 1.52992 * 109.47482 * 120.00154 * 2 1 3 5 5 C 1.52997 * 109.47482 * 179.97438 * 4 2 1 6 6 C 1.53006 * 109.47269 * 299.99806 * 5 4 2 7 7 H 1.08998 * 109.46876 * 300.00443 * 6 5 4 8 8 N 1.46500 * 109.47078 * 179.97438 * 6 5 4 9 9 C 1.34780 * 119.99474 * 154.99960 * 8 6 5 10 10 O 1.21623 * 120.00009 * 0.02562 * 9 8 6 11 11 C 1.47263 * 119.99744 * 180.02562 * 9 8 6 12 12 C 1.36775 * 126.94209 * 359.68636 * 11 9 8 13 13 N 1.34664 * 108.39214 * 179.87237 * 12 11 9 14 14 C 1.46496 * 124.84337 * 180.18199 * 13 12 11 15 15 C 1.36443 * 110.29975 * 0.40938 * 13 12 11 16 16 C 1.50699 * 125.57230 * 179.72649 * 15 13 12 17 17 O 1.42908 * 109.46816 * 30.00504 * 16 15 13 18 18 Si 1.86300 * 109.47051 * 149.99937 * 16 15 13 19 19 C 1.34488 * 108.85954 * 359.75017 * 15 13 12 20 20 C 1.53005 * 109.46542 * 59.99862 * 6 5 4 21 21 C 1.52997 * 109.47452 * 300.00026 * 20 6 5 22 22 H 1.09002 * 109.47153 * 299.99629 * 1 2 3 23 23 H 1.09001 * 109.46832 * 179.97438 * 1 2 3 24 24 H 1.09004 * 109.47261 * 59.99801 * 1 2 3 25 25 H 1.09002 * 109.47103 * 300.00247 * 4 2 1 26 26 H 1.09001 * 109.47066 * 60.00169 * 4 2 1 27 27 H 1.09001 * 109.47289 * 60.00300 * 5 4 2 28 28 H 1.09004 * 109.47261 * 180.02562 * 5 4 2 29 29 H 0.96990 * 120.00235 * 335.00474 * 8 6 5 30 30 H 1.07996 * 125.79735 * 359.97438 * 12 11 9 31 31 H 1.09004 * 109.47313 * 270.25355 * 14 13 12 32 32 H 1.08998 * 109.47658 * 30.26330 * 14 13 12 33 33 H 1.09008 * 109.46782 * 150.26003 * 14 13 12 34 34 H 1.08991 * 109.47406 * 270.00367 * 16 15 13 35 35 H 0.96693 * 114.00025 * 59.99641 * 17 16 15 36 36 H 1.48507 * 109.99782 * 180.02562 * 18 16 15 37 37 H 1.48502 * 110.00290 * 301.31997 * 18 16 15 38 38 H 1.07996 * 126.83879 * 179.97438 * 19 15 13 39 39 H 1.09001 * 109.46812 * 60.00243 * 20 6 5 40 40 H 1.09002 * 109.46935 * 179.97438 * 20 6 5 41 41 H 1.09001 * 109.46832 * 300.00199 * 21 20 6 42 42 H 1.08993 * 109.47194 * 179.97438 * 21 20 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0400 -0.7212 1.2491 5 6 3.5700 -0.7218 1.2488 6 6 4.0795 -1.4434 -0.0005 7 1 3.7158 -2.4709 -0.0002 8 7 5.5445 -1.4434 -0.0010 9 6 6.2181 -2.3998 -0.6705 10 8 5.6097 -3.2625 -1.2745 11 6 7.6907 -2.4002 -0.6707 12 6 8.5130 -1.5014 -0.0488 13 7 9.7896 -1.8556 -0.2903 14 6 10.9658 -1.1403 0.2105 15 6 9.8309 -2.9730 -1.0723 16 6 11.0827 -3.6600 -1.5541 17 8 12.1284 -3.4692 -0.5990 18 14 10.7521 -5.4822 -1.7570 19 6 8.5720 -3.3608 -1.3433 20 6 3.5694 -0.7221 -1.2497 21 6 2.0395 -0.7215 -1.2494 22 1 -0.3633 0.5138 0.8900 23 1 -0.3633 -1.0277 -0.0005 24 1 -0.3634 0.5139 -0.8900 25 1 1.6767 -0.2074 2.1392 26 1 1.6768 -1.7489 1.2491 27 1 3.9338 0.3057 1.2487 28 1 3.9334 -1.2361 2.1386 29 1 6.0297 -0.7553 0.4804 30 1 8.1929 -0.6530 0.5378 31 1 11.2578 -0.3736 -0.5072 32 1 10.7270 -0.6720 1.1654 33 1 11.7880 -1.8430 0.3461 34 1 11.3839 -3.2365 -2.5121 35 1 11.9288 -3.8224 0.2787 36 1 11.9792 -6.1713 -2.2312 37 1 10.3099 -6.0653 -0.4648 38 1 8.2699 -4.2101 -1.9380 39 1 3.9332 0.3054 -1.2498 40 1 3.9328 -1.2359 -2.1397 41 1 1.6758 -1.7491 -1.2492 42 1 1.6761 -0.2073 -2.1390 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_13287730.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:34:22 Heat of formation + Delta-G solvation = -34.016692 kcal Electronic energy + Delta-G solvation = -22036.427189 eV Core-core repulsion = 18790.022294 eV Total energy + Delta-G solvation = -3246.404895 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 279.162 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -42.46751 -40.65116 -38.98711 -37.99885 -35.45975 -33.82437 -32.36824 -31.73144 -31.05592 -27.86684 -26.88677 -26.02211 -23.78814 -23.56157 -21.95691 -21.11888 -20.78925 -20.32055 -19.02561 -17.57202 -17.01806 -16.95074 -16.79797 -15.98888 -15.81305 -15.45174 -15.29802 -15.20508 -15.12253 -14.92641 -14.45639 -14.16144 -14.07547 -13.68591 -13.46092 -13.32133 -13.17820 -13.13409 -13.06467 -12.50749 -12.32357 -12.06653 -11.93560 -11.87252 -11.63598 -11.27577 -11.05804 -10.95657 -10.63390 -9.88804 -9.53558 -9.20486 -4.92813 0.79027 1.04413 1.45117 1.65146 1.79842 2.04177 2.36898 2.75185 3.02756 3.53034 3.68977 3.74263 3.76750 3.80355 3.93051 4.10953 4.16057 4.22825 4.26353 4.39776 4.43509 4.46650 4.52673 4.55049 4.57492 4.59737 4.76433 4.82026 4.90810 4.93403 5.00745 5.02098 5.09801 5.18628 5.23646 5.30253 5.33645 5.43843 5.55568 5.64396 5.73897 5.95986 6.14746 6.17295 6.74142 7.54136 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.094 4.094 3 H 0.070 0.930 4 C -0.111 4.111 5 C -0.126 4.126 6 C 0.148 3.852 7 H 0.089 0.911 8 N -0.730 5.730 9 C 0.591 3.409 10 O -0.541 6.541 11 C -0.227 4.227 12 C 0.049 3.951 13 N -0.426 5.426 14 C 0.050 3.950 15 C -0.023 4.023 16 C -0.049 4.049 17 O -0.533 6.533 18 Si 0.712 3.288 19 C -0.130 4.130 20 C -0.129 4.129 21 C -0.112 4.112 22 H 0.054 0.946 23 H 0.055 0.945 24 H 0.055 0.945 25 H 0.067 0.933 26 H 0.066 0.934 27 H 0.067 0.933 28 H 0.068 0.932 29 H 0.395 0.605 30 H 0.169 0.831 31 H 0.075 0.925 32 H 0.081 0.919 33 H 0.111 0.889 34 H 0.122 0.878 35 H 0.377 0.623 36 H -0.253 1.253 37 H -0.257 1.257 38 H 0.158 0.842 39 H 0.062 0.938 40 H 0.069 0.931 41 H 0.065 0.935 42 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.166 3.594 2.338 4.444 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.113 4.113 3 H 0.088 0.912 4 C -0.149 4.149 5 C -0.164 4.164 6 C 0.043 3.957 7 H 0.107 0.893 8 N -0.380 5.380 9 C 0.380 3.620 10 O -0.418 6.418 11 C -0.237 4.237 12 C -0.087 4.087 13 N -0.101 5.101 14 C -0.091 4.091 15 C -0.132 4.132 16 C -0.158 4.158 17 O -0.339 6.339 18 Si 0.611 3.389 19 C -0.154 4.154 20 C -0.168 4.168 21 C -0.150 4.150 22 H 0.073 0.927 23 H 0.074 0.926 24 H 0.074 0.926 25 H 0.086 0.914 26 H 0.085 0.915 27 H 0.085 0.915 28 H 0.087 0.913 29 H 0.229 0.771 30 H 0.187 0.813 31 H 0.093 0.907 32 H 0.100 0.900 33 H 0.129 0.871 34 H 0.140 0.860 35 H 0.226 0.774 36 H -0.178 1.178 37 H -0.181 1.181 38 H 0.175 0.825 39 H 0.081 0.919 40 H 0.088 0.912 41 H 0.084 0.916 42 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 1.554 2.588 1.766 3.498 hybrid contribution 0.630 1.056 1.360 1.833 sum 2.184 3.644 3.126 5.274 Atomic orbital electron populations 1.21838 0.95052 1.01998 1.01769 1.21182 0.95661 0.99617 0.94827 0.91190 1.21545 0.94117 1.01292 0.97966 1.21810 0.96637 1.00785 0.97194 1.20972 0.78909 1.00959 0.94831 0.89318 1.45923 1.07082 1.30752 1.54276 1.17385 0.85856 0.80713 0.78049 1.90781 1.69741 1.37590 1.43710 1.20345 0.92140 1.01397 1.09813 1.21934 0.83036 1.00645 1.03108 1.43480 1.06247 1.21474 1.38884 1.22545 0.87716 0.98743 1.00086 1.20748 0.96655 0.92528 1.03250 1.24784 0.84536 1.11966 0.94528 1.86551 1.42293 1.81156 1.23939 0.94176 0.85176 0.72055 0.87527 1.21630 0.89514 1.01041 1.03194 1.21921 0.95820 1.00638 0.98372 1.21566 0.94731 1.01088 0.97660 0.92666 0.92561 0.92605 0.91427 0.91519 0.91462 0.91296 0.77132 0.81343 0.90685 0.90036 0.87137 0.86012 0.77413 1.17795 1.18057 0.82478 0.91940 0.91245 0.91594 0.91633 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.11 9.19 37.16 0.34 0.45 16 2 C -0.09 0.07 2.72 -90.62 -0.25 -0.18 16 3 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 4 C -0.11 0.11 5.20 -26.74 -0.14 -0.03 16 5 C -0.13 0.16 5.39 -26.73 -0.14 0.01 16 6 C 0.15 0.10 2.45 -67.92 -0.17 -0.06 16 7 H 0.09 0.26 7.58 -51.93 -0.39 -0.14 16 8 N -0.73 -0.39 5.07 -54.93 -0.28 -0.67 16 9 C 0.59 2.19 7.77 -12.59 -0.10 2.09 16 10 O -0.54 -4.09 16.63 5.26 0.09 -4.00 16 11 C -0.23 -0.51 6.29 -103.35 -0.65 -1.16 16 12 C 0.05 -0.02 10.83 -16.84 -0.18 -0.20 16 13 N -0.43 0.15 3.09 -119.89 -0.37 -0.22 16 14 C 0.05 -0.14 10.71 59.84 0.64 0.50 16 15 C -0.02 -0.01 6.14 -81.87 -0.50 -0.51 16 16 C -0.05 0.04 2.98 36.01 0.11 0.15 16 17 O -0.53 0.41 9.95 -35.23 -0.35 0.06 16 18 Si 0.71 -0.61 31.12 -169.99 -5.29 -5.90 16 19 C -0.13 -0.26 9.49 -37.50 -0.36 -0.61 16 20 C -0.13 -0.11 5.49 -26.73 -0.15 -0.26 16 21 C -0.11 -0.02 5.20 -26.73 -0.14 -0.16 16 22 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 23 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 24 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 25 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 26 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 27 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 28 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.40 -0.89 7.54 -40.82 -0.31 -1.20 16 30 H 0.17 -0.64 7.45 -52.49 -0.39 -1.03 16 31 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 32 H 0.08 -0.37 8.13 -51.93 -0.42 -0.79 16 33 H 0.11 -0.32 4.93 -51.92 -0.26 -0.58 16 34 H 0.12 -0.17 7.96 -51.93 -0.41 -0.59 16 35 H 0.38 -1.20 8.38 45.56 0.38 -0.82 16 36 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 37 H -0.26 -0.47 7.11 56.52 0.40 -0.07 16 38 H 0.16 0.16 6.89 -52.49 -0.36 -0.20 16 39 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 40 H 0.07 0.21 8.14 -51.93 -0.42 -0.22 16 41 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 42 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 LS Contribution 334.66 15.07 5.04 5.04 Total: 0.00 -7.40 334.66 -9.70 -17.10 By element: Atomic # 1 Polarization: -4.58 SS G_CDS: -6.86 Total: -11.43 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: -1.68 Total: 0.02 kcal Atomic # 7 Polarization: -0.24 SS G_CDS: -0.65 Total: -0.89 kcal Atomic # 8 Polarization: -3.68 SS G_CDS: -0.26 Total: -3.94 kcal Atomic # 14 Polarization: -0.61 SS G_CDS: -5.29 Total: -5.90 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -7.40 -9.70 -17.10 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_13287730.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.915 kcal (2) G-P(sol) polarization free energy of solvation -7.404 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.319 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.697 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.101 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.017 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds