Wall clock time and date at job start Tue Mar 9 2021 14:34:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 H 1.09001 * 109.47354 * 2 1 4 4 C 1.53007 * 109.47231 * 119.99997 * 2 1 3 5 5 C 1.53000 * 109.47231 * 179.97438 * 4 2 1 6 6 C 1.52997 * 109.46908 * 300.00029 * 5 4 2 7 7 H 1.09001 * 109.47615 * 300.00076 * 6 5 4 8 8 N 1.46505 * 109.46872 * 180.02562 * 6 5 4 9 9 C 1.34780 * 119.99856 * 155.00313 * 8 6 5 10 10 O 1.21281 * 120.00201 * 359.97438 * 9 8 6 11 11 C 1.50699 * 119.99648 * 179.97438 * 9 8 6 12 12 C 1.50699 * 109.46905 * 179.97438 * 11 9 8 13 13 C 1.38281 * 119.93129 * 269.71835 * 12 11 9 14 14 C 1.38128 * 120.06123 * 179.76625 * 13 12 11 15 15 C 1.38825 * 119.93344 * 0.49021 * 14 13 12 16 16 N 1.40198 * 120.06272 * 179.74474 * 15 14 13 17 17 C 1.36576 * 125.66823 * 236.11404 * 16 15 14 18 18 C 1.34851 * 108.19846 * 180.02562 * 17 16 15 19 19 C 1.40937 * 107.46859 * 0.02562 * 18 17 16 20 20 C 1.34849 * 107.47055 * 359.73472 * 19 18 17 21 21 C 1.50700 * 125.90170 * 180.25853 * 20 19 18 22 22 O 1.42905 * 109.46910 * 218.42212 * 21 20 19 23 23 Si 1.86297 * 109.47019 * 338.41902 * 21 20 19 24 24 C 1.38821 * 119.87245 * 359.76898 * 15 14 13 25 25 C 1.38128 * 119.93139 * 359.97438 * 24 15 14 26 26 C 1.52998 * 109.47281 * 60.00123 * 6 5 4 27 27 C 1.52997 * 109.47216 * 239.99804 * 2 1 3 28 28 H 1.08998 * 109.46724 * 299.99855 * 1 2 3 29 29 H 1.09001 * 109.46824 * 59.99834 * 1 2 3 30 30 H 1.08991 * 109.47341 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.46949 * 59.99755 * 4 2 1 32 32 H 1.08997 * 109.46915 * 299.99984 * 4 2 1 33 33 H 1.09001 * 109.46824 * 180.02562 * 5 4 2 34 34 H 1.09001 * 109.47354 * 60.00003 * 5 4 2 35 35 H 0.96998 * 119.99855 * 334.99342 * 8 6 5 36 36 H 1.09006 * 109.47481 * 299.99675 * 11 9 8 37 37 H 1.09001 * 109.47215 * 59.99375 * 11 9 8 38 38 H 1.07997 * 119.96751 * 0.02562 * 13 12 11 39 39 H 1.08003 * 120.03104 * 180.25818 * 14 13 12 40 40 H 1.08002 * 125.89822 * 0.02562 * 17 16 15 41 41 H 1.08000 * 126.26220 * 179.97438 * 18 17 16 42 42 H 1.08007 * 126.26453 * 179.97438 * 19 18 17 43 43 H 1.08992 * 109.47322 * 98.41827 * 21 20 19 44 44 H 0.96694 * 114.00100 * 65.21944 * 22 21 20 45 45 H 1.48503 * 110.00277 * 58.68239 * 23 21 20 46 46 H 1.48506 * 110.00188 * 180.02562 * 23 21 20 47 47 H 1.07995 * 120.03582 * 179.97438 * 24 15 14 48 48 H 1.07997 * 119.96534 * 180.02562 * 25 24 15 49 49 H 1.09001 * 109.47048 * 59.99985 * 26 6 5 50 50 H 1.09006 * 109.47041 * 179.97438 * 26 6 5 51 51 H 1.08991 * 109.47632 * 300.00260 * 27 2 1 52 52 H 1.09001 * 109.46928 * 60.00426 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0400 -0.7213 1.2493 5 6 3.5700 -0.7218 1.2490 6 6 4.0795 -1.4434 -0.0003 7 1 3.7158 -2.4710 -0.0001 8 7 5.5445 -1.4445 -0.0003 9 6 6.2177 -2.4011 -0.6698 10 8 5.6107 -3.2613 -1.2719 11 6 7.7247 -2.4018 -0.6703 12 6 8.2262 -3.5664 -1.4846 13 6 8.4613 -4.7848 -0.8743 14 6 8.9163 -5.8554 -1.6191 15 6 9.1473 -5.7045 -2.9797 16 7 9.6143 -6.7878 -3.7372 17 6 10.7477 -6.7970 -4.4991 18 6 10.8591 -8.0120 -5.0736 19 6 9.7559 -8.7816 -4.6530 20 6 9.0138 -8.0107 -3.8323 21 6 7.7401 -8.4258 -3.1421 22 8 6.8224 -7.3303 -3.1370 23 14 6.9829 -9.8658 -4.0496 24 6 8.9155 -4.4786 -3.5885 25 6 8.4554 -3.4131 -2.8396 26 6 3.5695 -0.7222 -1.2495 27 6 2.0400 -0.7213 -1.2492 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 1.6767 -1.7489 1.2493 32 1 1.6767 -0.2074 2.1392 33 1 3.9333 -1.2361 2.1387 34 1 3.9338 0.3057 1.2487 35 1 6.0300 -0.7567 0.4815 36 1 8.0884 -1.4707 -1.1049 37 1 8.0883 -2.4913 0.3534 38 1 8.2849 -4.9005 0.1848 39 1 9.0958 -6.8079 -1.1427 40 1 11.4359 -5.9735 -4.6206 41 1 11.6488 -8.3356 -5.7355 42 1 9.5455 -9.8032 -4.9334 43 1 7.9617 -8.7189 -2.1161 44 1 6.5182 -7.0679 -4.0165 45 1 7.9398 -11.0008 -4.0898 46 1 5.7257 -10.2844 -3.3792 47 1 9.0947 -4.3582 -4.6467 48 1 8.2744 -2.4594 -3.3128 49 1 3.9332 0.3053 -1.2497 50 1 3.9328 -1.2361 -2.1395 51 1 1.6767 -1.7489 -1.2493 52 1 1.6767 -0.2074 -2.1392 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_13287746.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:34:28 Heat of formation + Delta-G solvation = -3.108120 kcal Electronic energy + Delta-G solvation = -31438.575998 eV Core-core repulsion = 27369.531600 eV Total energy + Delta-G solvation = -4069.044398 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 355.193 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -42.55819 -41.19150 -39.99044 -39.02366 -37.54451 -35.62275 -34.76842 -32.51445 -32.05912 -31.81595 -31.37319 -30.90882 -28.06523 -26.50169 -25.91295 -23.87875 -23.80087 -23.38878 -22.18080 -21.41385 -21.31308 -20.72389 -20.48450 -19.12131 -18.08342 -17.57447 -17.24637 -16.98575 -16.43154 -16.15054 -15.89997 -15.71793 -15.48297 -15.28258 -15.24741 -15.21966 -14.83675 -14.55903 -14.43169 -14.32807 -14.24353 -14.06273 -13.81330 -13.72737 -13.27777 -13.23752 -13.22820 -13.11401 -13.02087 -12.59813 -12.54349 -12.14187 -12.09770 -11.95891 -11.89916 -11.78413 -11.70318 -11.34732 -11.14200 -10.78593 -10.60131 -10.12241 -9.99749 -9.89328 -9.11303 -8.94091 -4.93542 0.11097 0.44641 1.18034 1.43712 1.71381 1.71425 1.94636 2.10514 2.15446 2.21811 2.79038 3.48339 3.58917 3.62734 3.66351 3.77744 3.79763 3.81951 3.96317 3.99929 4.05439 4.13658 4.18852 4.22934 4.32892 4.36289 4.44015 4.44196 4.47608 4.51784 4.52962 4.56678 4.65169 4.70417 4.71248 4.75105 4.87615 4.90003 4.95311 5.01345 5.02628 5.11516 5.14485 5.21154 5.27601 5.28680 5.30722 5.35537 5.35600 5.47866 5.48088 5.55406 5.56670 5.85307 6.05643 6.30631 6.51596 6.62610 6.65128 7.29619 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.094 4.094 3 H 0.070 0.930 4 C -0.112 4.112 5 C -0.126 4.126 6 C 0.146 3.854 7 H 0.088 0.912 8 N -0.731 5.731 9 C 0.513 3.487 10 O -0.522 6.522 11 C -0.104 4.104 12 C -0.061 4.061 13 C -0.089 4.089 14 C -0.093 4.093 15 C 0.131 3.869 16 N -0.390 5.390 17 C -0.006 4.006 18 C -0.190 4.190 19 C -0.193 4.193 20 C -0.008 4.008 21 C -0.048 4.048 22 O -0.533 6.533 23 Si 0.717 3.283 24 C -0.114 4.114 25 C -0.091 4.091 26 C -0.128 4.128 27 C -0.112 4.112 28 H 0.055 0.945 29 H 0.055 0.945 30 H 0.055 0.945 31 H 0.066 0.934 32 H 0.068 0.932 33 H 0.069 0.931 34 H 0.068 0.932 35 H 0.399 0.601 36 H 0.105 0.895 37 H 0.104 0.896 38 H 0.126 0.874 39 H 0.122 0.878 40 H 0.164 0.836 41 H 0.141 0.859 42 H 0.142 0.858 43 H 0.110 0.890 44 H 0.376 0.624 45 H -0.254 1.254 46 H -0.254 1.254 47 H 0.128 0.872 48 H 0.127 0.873 49 H 0.063 0.937 50 H 0.067 0.933 51 H 0.065 0.935 52 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.304 5.112 0.806 5.185 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.150 4.150 5 C -0.164 4.164 6 C 0.041 3.959 7 H 0.106 0.894 8 N -0.383 5.383 9 C 0.299 3.701 10 O -0.397 6.397 11 C -0.144 4.144 12 C -0.062 4.062 13 C -0.108 4.108 14 C -0.112 4.112 15 C 0.041 3.959 16 N -0.063 5.063 17 C -0.134 4.134 18 C -0.214 4.214 19 C -0.218 4.218 20 C -0.118 4.118 21 C -0.159 4.159 22 O -0.337 6.337 23 Si 0.617 3.383 24 C -0.133 4.133 25 C -0.109 4.109 26 C -0.167 4.167 27 C -0.151 4.151 28 H 0.074 0.926 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.084 0.916 32 H 0.087 0.913 33 H 0.087 0.913 34 H 0.087 0.913 35 H 0.233 0.767 36 H 0.123 0.877 37 H 0.122 0.878 38 H 0.144 0.856 39 H 0.140 0.860 40 H 0.181 0.819 41 H 0.159 0.841 42 H 0.160 0.840 43 H 0.127 0.873 44 H 0.223 0.777 45 H -0.178 1.178 46 H -0.179 1.179 47 H 0.146 0.854 48 H 0.145 0.855 49 H 0.081 0.919 50 H 0.086 0.914 51 H 0.084 0.916 52 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges -0.412 3.837 1.239 4.053 hybrid contribution 0.778 0.617 0.667 1.196 sum 0.366 4.454 1.906 4.858 Atomic orbital electron populations 1.21835 0.94992 1.02014 1.01828 1.21181 0.95726 0.99616 0.94742 0.91141 1.21551 0.94082 1.01290 0.98034 1.21808 0.96688 1.00850 0.97082 1.20998 0.78944 1.00944 0.94978 0.89431 1.46123 1.07307 1.30813 1.54068 1.20539 0.89669 0.81186 0.78730 1.90778 1.70043 1.36706 1.42183 1.20698 0.92543 0.98860 1.02298 1.19266 0.98788 0.94256 0.93888 1.20797 0.98241 0.91783 0.99934 1.20879 0.99321 0.99143 0.91902 1.17582 1.01043 0.86868 0.90361 1.41430 1.19254 1.09369 1.36229 1.21994 0.91135 1.00583 0.99686 1.20911 1.01066 0.93837 1.05553 1.20770 0.97805 1.00180 1.03039 1.21054 0.99104 0.86287 1.05329 1.24798 0.87200 0.99465 1.04418 1.86571 1.62079 1.51211 1.33819 0.94089 0.80099 0.75574 0.88539 1.20980 1.00341 0.91904 1.00045 1.20793 0.98469 0.98662 0.93005 1.21898 0.95980 1.00617 0.98185 1.21552 0.94639 1.01109 0.97757 0.92611 0.92568 0.92572 0.91564 0.91340 0.91277 0.91338 0.76681 0.87697 0.87753 0.85634 0.86035 0.81907 0.84085 0.84042 0.87291 0.77693 1.17844 1.17897 0.85415 0.85481 0.91862 0.91412 0.91644 0.91589 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.15 9.19 37.16 0.34 0.49 16 2 C -0.09 0.10 2.72 -90.62 -0.25 -0.15 16 3 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 4 C -0.11 0.15 5.20 -26.73 -0.14 0.01 16 5 C -0.13 0.23 5.39 -26.73 -0.14 0.09 16 6 C 0.15 -0.03 2.45 -67.93 -0.17 -0.20 16 7 H 0.09 0.20 7.58 -51.93 -0.39 -0.20 16 8 N -0.73 0.87 5.08 -53.80 -0.27 0.60 16 9 C 0.51 0.57 7.79 -10.98 -0.09 0.48 16 10 O -0.52 -2.98 15.70 5.56 0.09 -2.89 16 11 C -0.10 0.16 5.83 -29.04 -0.17 -0.01 16 12 C -0.06 -0.06 4.37 -104.59 -0.46 -0.52 16 13 C -0.09 -0.16 9.69 -39.61 -0.38 -0.55 16 14 C -0.09 -0.27 8.56 -39.40 -0.34 -0.60 16 15 C 0.13 0.37 4.69 -83.60 -0.39 -0.03 16 16 N -0.39 -1.15 2.84 -56.73 -0.16 -1.32 16 17 C -0.01 -0.01 11.21 -16.64 -0.19 -0.20 16 18 C -0.19 -0.43 10.86 -39.76 -0.43 -0.86 16 19 C -0.19 -0.49 9.39 -39.76 -0.37 -0.86 16 20 C -0.01 -0.02 6.12 -81.69 -0.50 -0.52 16 21 C -0.05 -0.09 2.48 36.01 0.09 0.00 16 22 O -0.53 -1.45 10.99 -35.23 -0.39 -1.84 16 23 Si 0.72 0.21 30.93 -169.99 -5.26 -5.05 16 24 C -0.11 -0.19 9.77 -39.41 -0.38 -0.58 16 25 C -0.09 -0.10 9.69 -39.61 -0.38 -0.48 16 26 C -0.13 0.00 5.49 -26.76 -0.15 -0.15 16 27 C -0.11 0.03 5.20 -26.76 -0.14 -0.11 16 28 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 29 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 31 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 32 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 33 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 34 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 35 H 0.40 -1.60 8.60 -40.82 -0.35 -1.95 16 36 H 0.10 -0.39 8.09 -51.93 -0.42 -0.81 16 37 H 0.10 -0.37 8.08 -51.93 -0.42 -0.79 16 38 H 0.13 0.04 8.06 -52.49 -0.42 -0.38 16 39 H 0.12 0.34 8.06 -52.48 -0.42 -0.08 16 40 H 0.16 0.02 8.06 -52.49 -0.42 -0.41 16 41 H 0.14 0.08 8.06 -52.49 -0.42 -0.34 16 42 H 0.14 0.19 6.43 -52.48 -0.34 -0.15 16 43 H 0.11 0.24 7.96 -51.93 -0.41 -0.17 16 44 H 0.38 -0.04 8.60 45.56 0.39 0.35 16 45 H -0.25 -0.56 6.87 56.52 0.39 -0.17 16 46 H -0.25 -0.79 7.11 56.52 0.40 -0.39 16 47 H 0.13 0.07 8.06 -52.49 -0.42 -0.35 16 48 H 0.13 -0.09 8.06 -52.49 -0.42 -0.52 16 49 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 50 H 0.07 0.14 8.14 -51.93 -0.42 -0.29 16 51 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 52 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 LS Contribution 417.00 15.07 6.28 6.28 Total: 0.00 -7.87 417.00 -13.11 -20.98 By element: Atomic # 1 Polarization: -3.27 SS G_CDS: -8.76 Total: -12.03 kcal Atomic # 6 Polarization: -0.09 SS G_CDS: -4.64 Total: -4.73 kcal Atomic # 7 Polarization: -0.28 SS G_CDS: -0.43 Total: -0.72 kcal Atomic # 8 Polarization: -4.43 SS G_CDS: -0.30 Total: -4.73 kcal Atomic # 14 Polarization: 0.21 SS G_CDS: -5.26 Total: -5.05 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -7.87 -13.11 -20.98 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_13287746.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 17.868 kcal (2) G-P(sol) polarization free energy of solvation -7.867 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.002 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.110 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.976 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.108 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds