Wall clock time and date at job start Tue Mar 9 2021 14:34:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09006 * 109.47136 * 2 1 4 4 C 1.53001 * 109.46838 * 119.99864 * 2 1 3 5 5 C 1.53009 * 109.47049 * 180.02562 * 4 2 1 6 6 C 1.52991 * 109.47048 * 299.99995 * 5 4 2 7 7 H 1.09001 * 109.47415 * 299.99695 * 6 5 4 8 8 N 1.46505 * 109.47044 * 179.97438 * 6 5 4 9 9 C 1.34774 * 119.99856 * 155.00094 * 8 6 5 10 10 O 1.21552 * 120.00209 * 359.97438 * 9 8 6 11 11 C 1.47846 * 119.99687 * 180.02562 * 9 8 6 12 12 C 1.39516 * 120.56201 * 359.97438 * 11 9 8 13 13 N 1.31692 * 120.56915 * 179.97438 * 12 11 9 14 14 C 1.31919 * 121.87956 * 0.02562 * 13 12 11 15 15 C 1.38357 * 121.07949 * 0.02562 * 14 13 12 16 16 C 1.50701 * 120.34736 * 179.97438 * 15 14 13 17 17 O 1.42903 * 109.46878 * 119.99670 * 16 15 14 18 18 Si 1.86303 * 109.47233 * 359.97438 * 16 15 14 19 19 C 1.38353 * 119.30400 * 0.24682 * 15 14 13 20 20 C 1.53001 * 109.47191 * 60.00092 * 6 5 4 21 21 C 1.52998 * 109.46996 * 299.99581 * 20 6 5 22 22 H 1.08996 * 109.47395 * 300.00287 * 1 2 3 23 23 H 1.09003 * 109.47043 * 60.00303 * 1 2 3 24 24 H 1.09001 * 109.46698 * 179.97438 * 1 2 3 25 25 H 1.09000 * 109.47767 * 60.00442 * 4 2 1 26 26 H 1.09003 * 109.47364 * 299.99990 * 4 2 1 27 27 H 1.09003 * 109.46730 * 179.97438 * 5 4 2 28 28 H 1.09001 * 109.46764 * 60.00089 * 5 4 2 29 29 H 0.96999 * 119.99753 * 334.99787 * 8 6 5 30 30 H 1.08007 * 119.71446 * 0.02562 * 12 11 9 31 31 H 1.08004 * 119.46137 * 179.97438 * 14 13 12 32 32 H 1.09002 * 109.47060 * 239.99800 * 16 15 14 33 33 H 0.96700 * 114.00234 * 299.99722 * 17 16 15 34 34 H 1.48502 * 109.99951 * 180.02562 * 18 16 15 35 35 H 1.48507 * 109.99767 * 301.31682 * 18 16 15 36 36 H 1.07990 * 120.85674 * 179.70455 * 19 15 14 37 37 H 1.08997 * 109.47044 * 60.00237 * 20 6 5 38 38 H 1.08996 * 109.47004 * 180.02562 * 20 6 5 39 39 H 1.08997 * 109.47760 * 300.00218 * 21 20 6 40 40 H 1.09003 * 109.47201 * 180.02562 * 21 20 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0399 -0.7212 1.2493 5 6 3.5700 -0.7207 1.2497 6 6 4.0805 -1.4416 0.0005 7 1 3.7176 -2.4694 0.0003 8 7 5.5455 -1.4405 0.0006 9 6 6.2201 -2.3962 -0.6689 10 8 5.6130 -3.2592 -1.2723 11 6 7.6985 -2.3954 -0.6683 12 6 8.4072 -1.4108 0.0208 13 7 9.7241 -1.4103 0.0217 14 6 10.4217 -2.3276 -0.6202 15 6 9.7936 -3.3371 -1.3280 16 6 10.6067 -4.3763 -2.0559 17 8 10.2962 -5.6719 -1.5392 18 14 12.4207 -4.0283 -1.8122 19 6 8.4112 -3.3791 -1.3650 20 6 3.5706 -0.7203 -1.2488 21 6 2.0406 -0.7210 -1.2492 22 1 -0.3634 0.5138 0.8899 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 1.6767 -1.7489 1.2494 26 1 1.6766 -0.2074 2.1393 27 1 3.9332 -1.2341 2.1399 28 1 3.9329 0.3071 1.2499 29 1 6.0300 -0.7520 0.4824 30 1 7.8711 -0.6429 0.5587 31 1 11.5007 -2.2896 -0.5936 32 1 10.3705 -4.3430 -3.1195 33 1 10.4817 -5.7739 -0.5957 34 1 13.2334 -5.0459 -2.5257 35 1 12.7497 -2.6709 -2.3170 36 1 7.8951 -4.1529 -1.9136 37 1 3.9336 0.3074 -1.2486 38 1 3.9339 -1.2342 -2.1387 39 1 1.6776 -1.7487 -1.2494 40 1 1.6773 -0.2075 -2.1394 There are 51 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 51 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_13287814.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:34:30 Heat of formation + Delta-G solvation = -46.915831 kcal Electronic energy + Delta-G solvation = -21363.983359 eV Core-core repulsion = 18144.330594 eV Total energy + Delta-G solvation = -3219.652765 eV No. of doubly occupied orbitals = 51 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 277.146 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.94860 -40.72539 -39.22749 -37.98959 -35.80317 -33.76132 -33.49353 -31.87082 -31.76895 -27.42646 -27.24010 -25.33670 -23.91959 -23.76165 -22.33936 -21.54834 -20.81159 -19.22762 -18.27320 -17.98542 -17.70385 -16.91004 -16.54181 -16.17065 -15.96976 -15.59846 -15.31442 -15.27851 -14.99398 -14.65791 -14.44086 -14.26580 -14.16409 -13.75248 -13.49998 -13.28375 -13.21762 -12.77187 -12.62855 -12.17340 -12.14256 -12.00648 -11.77015 -11.40876 -11.27292 -11.13901 -11.04895 -10.65957 -10.55742 -10.33753 -10.09771 -5.17206 -0.58878 -0.03694 1.11059 1.49479 1.72913 1.84620 1.96684 2.62883 2.99970 3.27824 3.36363 3.55544 3.60112 3.63233 3.67337 3.72928 3.85975 3.99584 4.08804 4.11887 4.17898 4.32780 4.38452 4.40578 4.44218 4.48709 4.68443 4.71220 4.82105 4.85860 4.87729 4.92810 4.98520 5.08390 5.11289 5.17577 5.24180 5.28057 5.32741 5.41349 5.48358 6.34532 6.41774 6.60614 7.08240 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.095 4.095 3 H 0.071 0.929 4 C -0.111 4.111 5 C -0.127 4.127 6 C 0.146 3.854 7 H 0.091 0.909 8 N -0.722 5.722 9 C 0.565 3.435 10 O -0.527 6.527 11 C -0.188 4.188 12 C 0.139 3.861 13 N -0.478 5.478 14 C 0.127 3.873 15 C -0.179 4.179 16 C -0.065 4.065 17 O -0.536 6.536 18 Si 0.689 3.311 19 C 0.011 3.989 20 C -0.130 4.130 21 C -0.112 4.112 22 H 0.055 0.945 23 H 0.055 0.945 24 H 0.055 0.945 25 H 0.066 0.934 26 H 0.069 0.931 27 H 0.071 0.929 28 H 0.069 0.931 29 H 0.399 0.601 30 H 0.161 0.839 31 H 0.163 0.837 32 H 0.120 0.880 33 H 0.381 0.619 34 H -0.248 1.248 35 H -0.253 1.253 36 H 0.152 0.848 37 H 0.064 0.936 38 H 0.068 0.932 39 H 0.066 0.934 40 H 0.066 0.934 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.635 2.588 3.817 4.655 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.113 4.113 3 H 0.089 0.911 4 C -0.149 4.149 5 C -0.165 4.165 6 C 0.042 3.958 7 H 0.109 0.891 8 N -0.373 5.373 9 C 0.351 3.649 10 O -0.404 6.404 11 C -0.193 4.193 12 C -0.020 4.020 13 N -0.185 5.185 14 C -0.029 4.029 15 C -0.182 4.182 16 C -0.176 4.176 17 O -0.341 6.341 18 Si 0.590 3.410 19 C -0.015 4.015 20 C -0.168 4.168 21 C -0.150 4.150 22 H 0.074 0.926 23 H 0.074 0.926 24 H 0.074 0.926 25 H 0.085 0.915 26 H 0.088 0.912 27 H 0.089 0.911 28 H 0.088 0.912 29 H 0.235 0.765 30 H 0.178 0.822 31 H 0.180 0.820 32 H 0.137 0.863 33 H 0.228 0.772 34 H -0.173 1.173 35 H -0.178 1.178 36 H 0.170 0.830 37 H 0.083 0.917 38 H 0.086 0.914 39 H 0.084 0.916 40 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges 1.218 2.705 2.837 4.105 hybrid contribution -0.751 -0.123 -0.583 0.958 sum 0.467 2.582 2.254 3.459 Atomic orbital electron populations 1.21834 0.94948 1.02027 1.01861 1.21189 0.95770 0.99664 0.94701 0.91083 1.21551 0.93913 1.01361 0.98093 1.21823 0.96822 1.00938 0.96937 1.21078 0.78135 1.01295 0.95326 0.89074 1.46006 1.07666 1.30297 1.53344 1.18010 0.86441 0.81476 0.78970 1.90820 1.69562 1.37074 1.42947 1.21063 0.94516 0.99734 1.03985 1.23032 0.90142 0.95252 0.93548 1.67718 1.07919 1.24451 1.18413 1.22899 1.00259 0.89060 0.90673 1.21442 0.95283 0.99495 1.01948 1.25032 1.09303 0.83454 0.99793 1.86546 1.89047 1.28852 1.29659 0.94812 0.74536 0.80511 0.91135 1.21632 0.92778 0.95062 0.92043 1.21926 0.96130 1.00749 0.98030 1.21564 0.94449 1.01182 0.97850 0.92568 0.92576 0.92557 0.91479 0.91219 0.91066 0.91200 0.76543 0.82178 0.82043 0.86270 0.77193 1.17290 1.17763 0.83007 0.91677 0.91351 0.91573 0.91508 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.18 9.19 37.16 0.34 0.52 16 2 C -0.09 0.13 2.72 -90.62 -0.25 -0.12 16 3 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 4 C -0.11 0.20 5.20 -26.73 -0.14 0.06 16 5 C -0.13 0.28 5.39 -26.73 -0.14 0.13 16 6 C 0.15 -0.06 2.45 -67.93 -0.17 -0.23 16 7 H 0.09 0.15 7.58 -51.93 -0.39 -0.25 16 8 N -0.72 0.58 5.03 -54.75 -0.28 0.31 16 9 C 0.56 1.14 7.75 -12.33 -0.10 1.04 16 10 O -0.53 -3.07 16.08 5.32 0.09 -2.99 16 11 C -0.19 -0.15 5.89 -104.82 -0.62 -0.77 16 12 C 0.14 -0.07 10.71 -17.14 -0.18 -0.26 16 13 N -0.48 -0.34 10.35 -12.91 -0.13 -0.47 16 14 C 0.13 -0.06 9.84 -17.47 -0.17 -0.23 16 15 C -0.18 0.06 5.39 -104.54 -0.56 -0.50 16 16 C -0.06 0.07 2.83 36.01 0.10 0.17 16 17 O -0.54 0.20 12.78 -35.23 -0.45 -0.25 16 18 Si 0.69 -1.50 29.82 -169.99 -5.07 -6.57 16 19 C 0.01 0.01 9.31 -38.87 -0.36 -0.35 16 20 C -0.13 0.01 5.49 -26.73 -0.15 -0.13 16 21 C -0.11 0.06 5.21 -26.73 -0.14 -0.08 16 22 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 23 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 24 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 25 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 26 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 27 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 28 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 29 H 0.40 -1.42 6.67 -40.82 -0.27 -1.69 16 30 H 0.16 -0.59 6.42 -52.48 -0.34 -0.92 16 31 H 0.16 -0.44 4.88 -52.48 -0.26 -0.70 16 32 H 0.12 -0.08 7.96 -51.93 -0.41 -0.49 16 33 H 0.38 -1.64 8.70 45.56 0.40 -1.24 16 34 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 35 H -0.25 0.01 7.11 56.52 0.40 0.41 16 36 H 0.15 0.30 7.74 -52.49 -0.41 -0.11 16 37 H 0.06 -0.04 8.14 -51.93 -0.42 -0.47 16 38 H 0.07 0.13 8.14 -51.93 -0.42 -0.29 16 39 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 40 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 LS Contribution 323.31 15.07 4.87 4.87 Total: 0.00 -7.17 323.31 -9.46 -16.63 By element: Atomic # 1 Polarization: -4.84 SS G_CDS: -5.95 Total: -10.79 kcal Atomic # 6 Polarization: 1.79 SS G_CDS: -2.53 Total: -0.74 kcal Atomic # 7 Polarization: 0.24 SS G_CDS: -0.41 Total: -0.17 kcal Atomic # 8 Polarization: -2.87 SS G_CDS: -0.36 Total: -3.23 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.07 Total: -6.57 kcal Total LS contribution 4.87 Total: 4.87 kcal Total: -7.17 -9.46 -16.63 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_13287814.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.288 kcal (2) G-P(sol) polarization free energy of solvation -7.172 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.460 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.455 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.628 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.916 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds