Wall clock time and date at job start Tue Mar 9 2021 14:34:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.36414 * 125.80056 * 2 1 4 4 C 1.47378 * 127.19324 * 359.97088 * 3 2 1 5 5 O 1.21606 * 120.00200 * 359.97438 * 4 3 2 6 6 N 1.34780 * 119.99729 * 180.02562 * 4 3 2 7 7 C 1.46500 * 119.99474 * 179.97438 * 6 4 3 8 8 H 1.08998 * 109.48027 * 34.99734 * 7 6 4 9 9 C 1.53006 * 109.47078 * 154.99960 * 7 6 4 10 10 C 1.52997 * 109.47269 * 179.97438 * 9 7 6 11 11 C 1.52992 * 109.47482 * 299.99806 * 10 9 7 12 12 H 1.08998 * 109.46862 * 300.00565 * 11 10 9 13 13 C 1.52997 * 109.47482 * 179.97438 * 11 10 9 14 14 C 1.53006 * 109.47223 * 59.99712 * 11 10 9 15 15 C 1.52997 * 109.47127 * 300.00506 * 14 11 10 16 16 C 1.47023 * 105.61473 * 180.22584 * 3 2 1 17 17 C 1.34179 * 105.94827 * 359.63143 * 16 3 2 18 18 C 1.50701 * 125.43200 * 180.12448 * 17 16 3 19 19 O 1.42903 * 109.47160 * 300.26528 * 18 17 16 20 20 Si 1.86306 * 109.47011 * 180.26893 * 18 17 16 21 21 O 1.33645 * 125.80090 * 180.02562 * 2 1 3 22 22 H 1.08999 * 109.47425 * 89.99313 * 1 2 3 23 23 H 1.08996 * 109.47197 * 210.00102 * 1 2 3 24 24 H 1.09006 * 109.46722 * 330.00158 * 1 2 3 25 25 H 0.96990 * 120.00291 * 359.97438 * 6 4 3 26 26 H 1.09001 * 109.47369 * 59.99066 * 9 7 6 27 27 H 1.09004 * 109.46785 * 299.99565 * 9 7 6 28 28 H 1.09002 * 109.47153 * 179.97438 * 10 9 7 29 29 H 1.09001 * 109.46832 * 59.99780 * 10 9 7 30 30 H 1.09002 * 109.47153 * 59.99783 * 13 11 10 31 31 H 1.09001 * 109.46832 * 299.99974 * 13 11 10 32 32 H 1.09004 * 109.47261 * 179.97438 * 13 11 10 33 33 H 1.09001 * 109.47002 * 60.00080 * 14 11 10 34 34 H 1.08993 * 109.46955 * 180.02562 * 14 11 10 35 35 H 1.09001 * 109.47289 * 299.99953 * 15 14 11 36 36 H 1.09002 * 109.47153 * 179.97438 * 15 14 11 37 37 H 1.07994 * 127.02488 * 179.74499 * 16 3 2 38 38 H 1.08992 * 109.47364 * 60.26749 * 18 17 16 39 39 H 0.96703 * 113.99957 * 300.00220 * 19 18 17 40 40 H 1.48501 * 109.99988 * 58.67933 * 20 18 17 41 41 H 1.48492 * 109.99908 * 180.02562 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8740 2.5157 -0.0006 5 8 0.6891 2.7892 -0.0016 6 7 2.7931 3.5015 -0.0010 7 6 2.3646 4.9024 -0.0022 8 1 1.4531 5.0042 0.5868 9 6 3.4654 5.7730 0.6072 10 6 3.0182 7.2362 0.6054 11 6 2.7497 7.6857 -0.8321 12 1 3.6613 7.5836 -1.4209 13 6 2.3019 9.1487 -0.8338 14 6 1.6489 6.8152 -1.4416 15 6 2.0962 5.3520 -1.4399 16 6 3.6849 0.5991 -0.0056 17 6 3.5858 -0.7390 -0.0001 18 6 4.7458 -1.7010 -0.0001 19 8 5.5422 -1.4870 -1.1672 20 14 4.1026 -3.4495 0.0006 21 8 2.2888 -1.0839 -0.0005 22 1 -0.3634 0.0001 -1.0276 23 1 -0.3633 -0.8899 0.5138 24 1 -0.3633 0.8901 0.5138 25 1 3.7382 3.2834 -0.0006 26 1 4.3770 5.6713 0.0182 27 1 3.6569 5.4525 1.6313 28 1 3.8022 7.8563 1.0399 29 1 2.1066 7.3381 1.1942 30 1 3.0858 9.7692 -0.3995 31 1 1.3901 9.2502 -0.2452 32 1 2.1110 9.4691 -1.8581 33 1 0.7373 6.9171 -0.8528 34 1 1.4580 7.1352 -2.4659 35 1 3.0078 5.2500 -2.0286 36 1 1.3118 4.7318 -1.8736 37 1 4.5928 1.1839 -0.0110 38 1 5.3538 -1.5372 0.8896 39 1 5.0647 -1.6157 -1.9982 40 1 3.2461 -3.6761 -1.1912 41 1 5.2368 -4.4079 0.0012 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_13308374.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:34:32 Heat of formation + Delta-G solvation = -74.550151 kcal Electronic energy + Delta-G solvation = -22259.365135 eV Core-core repulsion = 18913.483915 eV Total energy + Delta-G solvation = -3345.881219 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 280.151 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -43.72425 -40.87188 -39.17977 -38.21092 -35.64393 -34.13129 -33.15315 -31.98888 -31.78447 -29.42252 -27.16088 -25.65801 -24.14066 -23.75347 -22.57477 -21.58638 -21.13420 -20.33536 -18.98292 -17.93150 -17.68443 -17.26471 -16.71806 -16.12587 -16.01165 -15.78398 -15.34441 -15.24223 -15.19534 -14.71444 -14.30239 -14.18630 -14.11857 -13.93214 -13.84823 -13.58598 -13.22931 -13.17455 -12.97048 -12.82741 -12.57569 -12.12546 -12.10470 -11.94830 -11.69715 -11.33985 -11.13549 -10.99753 -10.82970 -10.69353 -9.99951 -9.53745 -5.01753 0.33012 0.84302 1.10952 1.42764 1.68205 1.88984 2.21770 2.40972 3.07177 3.34747 3.61533 3.68571 3.76485 3.79072 3.91989 4.05904 4.14684 4.17428 4.26749 4.38116 4.41687 4.45995 4.49464 4.53739 4.56065 4.65728 4.72400 4.75758 4.82334 4.89029 4.96657 5.03440 5.12169 5.13411 5.16574 5.22045 5.24257 5.29255 5.37394 5.49775 5.57958 5.91404 6.18500 6.56260 7.29810 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.095 3.905 3 C -0.253 4.253 4 C 0.593 3.407 5 O -0.539 6.539 6 N -0.721 5.721 7 C 0.147 3.853 8 H 0.090 0.910 9 C -0.127 4.127 10 C -0.111 4.111 11 C -0.095 4.095 12 H 0.070 0.930 13 C -0.149 4.149 14 C -0.112 4.112 15 C -0.129 4.129 16 C -0.148 4.148 17 C -0.055 4.055 18 C -0.034 4.034 19 O -0.521 6.521 20 Si 0.702 3.298 21 O -0.168 6.168 22 H 0.091 0.909 23 H 0.082 0.918 24 H 0.111 0.889 25 H 0.400 0.600 26 H 0.068 0.932 27 H 0.070 0.930 28 H 0.068 0.932 29 H 0.066 0.934 30 H 0.055 0.945 31 H 0.055 0.945 32 H 0.055 0.945 33 H 0.065 0.935 34 H 0.065 0.935 35 H 0.063 0.937 36 H 0.068 0.932 37 H 0.158 0.842 38 H 0.137 0.863 39 H 0.381 0.619 40 H -0.256 1.256 41 H -0.249 1.249 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.274 0.029 1.418 1.907 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C 0.041 3.959 3 C -0.258 4.258 4 C 0.382 3.618 5 O -0.418 6.418 6 N -0.372 5.372 7 C 0.043 3.957 8 H 0.108 0.892 9 C -0.165 4.165 10 C -0.149 4.149 11 C -0.113 4.113 12 H 0.089 0.911 13 C -0.206 4.206 14 C -0.150 4.150 15 C -0.168 4.168 16 C -0.168 4.168 17 C -0.103 4.103 18 C -0.144 4.144 19 O -0.328 6.328 20 Si 0.601 3.399 21 O -0.065 6.065 22 H 0.109 0.891 23 H 0.101 0.899 24 H 0.129 0.871 25 H 0.234 0.766 26 H 0.087 0.913 27 H 0.088 0.912 28 H 0.087 0.913 29 H 0.085 0.915 30 H 0.074 0.926 31 H 0.074 0.926 32 H 0.074 0.926 33 H 0.084 0.916 34 H 0.084 0.916 35 H 0.082 0.918 36 H 0.086 0.914 37 H 0.175 0.825 38 H 0.155 0.845 39 H 0.229 0.771 40 H -0.180 1.180 41 H -0.173 1.173 Dipole moment (debyes) X Y Z Total from point charges 0.774 -0.711 1.437 1.780 hybrid contribution 0.872 0.621 -1.132 1.558 sum 1.646 -0.089 0.305 1.676 Atomic orbital electron populations 1.20701 0.83327 1.05503 1.04710 1.22922 0.94072 0.82845 0.96027 1.21155 0.93207 0.93893 1.17512 1.17164 0.85461 0.83684 0.75533 1.90770 1.16509 1.83999 1.50534 1.45874 1.09667 1.05960 1.75656 1.21024 0.98634 0.79073 0.96982 0.89213 1.21816 0.98002 0.95374 1.01298 1.21544 1.01840 0.94692 0.96809 1.21185 0.98820 0.95053 0.96264 0.91140 1.21835 1.01418 0.95473 1.01917 1.21563 0.98430 0.93756 1.01254 1.21923 1.01864 0.96629 0.96350 1.22575 0.96477 0.93497 1.04231 1.22546 0.82942 0.95552 1.09302 1.24339 0.90297 1.07676 0.92049 1.86662 1.38701 1.91731 1.15666 0.94361 0.81833 0.73686 0.90013 1.83669 1.16344 1.35059 1.71431 0.89075 0.89896 0.87051 0.76616 0.91350 0.91178 0.91311 0.91506 0.92611 0.92555 0.92589 0.91586 0.91585 0.91844 0.91356 0.82483 0.84526 0.77082 1.18024 1.17276 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.00 9.89 36.01 0.36 0.35 16 2 C 0.09 0.17 7.37 -34.96 -0.26 -0.09 16 3 C -0.25 -0.54 6.31 -103.28 -0.65 -1.20 16 4 C 0.59 1.82 7.78 -12.54 -0.10 1.72 16 5 O -0.54 -3.09 14.51 5.27 0.08 -3.01 16 6 N -0.72 -0.41 5.07 -54.89 -0.28 -0.68 16 7 C 0.15 0.06 2.46 -67.92 -0.17 -0.10 16 8 H 0.09 0.20 7.58 -51.93 -0.39 -0.19 16 9 C -0.13 0.16 5.39 -26.73 -0.14 0.02 16 10 C -0.11 0.13 5.20 -26.74 -0.14 -0.01 16 11 C -0.09 0.08 2.72 -90.62 -0.25 -0.17 16 12 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 13 C -0.15 0.13 9.19 37.16 0.34 0.47 16 14 C -0.11 0.01 5.20 -26.73 -0.14 -0.13 16 15 C -0.13 -0.08 5.49 -26.73 -0.15 -0.22 16 16 C -0.15 -0.08 10.46 -37.45 -0.39 -0.47 16 17 C -0.06 -0.02 6.20 -35.74 -0.22 -0.25 16 18 C -0.03 0.04 2.98 36.01 0.11 0.14 16 19 O -0.52 0.02 12.86 -35.23 -0.45 -0.43 16 20 Si 0.70 -0.84 32.09 -169.99 -5.45 -6.29 16 21 O -0.17 -0.22 8.89 7.69 0.07 -0.15 16 22 H 0.09 -0.05 8.14 -51.93 -0.42 -0.47 16 23 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 24 H 0.11 0.14 6.49 -51.93 -0.34 -0.20 16 25 H 0.40 -0.60 7.77 -40.82 -0.32 -0.92 16 26 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 28 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 29 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 33 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 34 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 36 H 0.07 0.17 8.14 -51.93 -0.42 -0.25 16 37 H 0.16 -0.21 7.74 -52.49 -0.41 -0.62 16 38 H 0.14 -0.35 7.96 -51.93 -0.41 -0.77 16 39 H 0.38 -0.99 8.70 45.56 0.40 -0.59 16 40 H -0.26 -0.40 7.11 56.52 0.40 0.00 16 41 H -0.25 -0.33 7.11 56.52 0.40 0.08 16 LS Contribution 334.50 15.07 5.04 5.04 Total: 0.00 -5.77 334.50 -9.39 -15.16 By element: Atomic # 1 Polarization: -3.11 SS G_CDS: -6.59 Total: -9.70 kcal Atomic # 6 Polarization: 1.87 SS G_CDS: -1.80 Total: 0.08 kcal Atomic # 7 Polarization: -0.41 SS G_CDS: -0.28 Total: -0.68 kcal Atomic # 8 Polarization: -3.29 SS G_CDS: -0.31 Total: -3.60 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.45 Total: -6.29 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -5.77 -9.39 -15.16 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_13308374.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.393 kcal (2) G-P(sol) polarization free energy of solvation -5.771 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.164 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.386 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.157 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.550 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds