Wall clock time and date at job start Tue Mar 9 2021 14:34:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 H 1.09000 * 109.46911 * 2 1 4 4 C 1.53000 * 109.47195 * 119.99602 * 2 1 3 5 5 C 1.53002 * 109.46943 * 180.02562 * 4 2 1 6 6 C 1.53005 * 109.47092 * 300.00006 * 5 4 2 7 7 H 1.09006 * 109.46748 * 299.99865 * 6 5 4 8 8 N 1.46499 * 109.46903 * 180.02562 * 6 5 4 9 9 C 1.34774 * 120.00180 * 85.00137 * 8 6 5 10 10 O 1.21594 * 119.99828 * 359.97438 * 9 8 6 11 11 C 1.47520 * 119.99765 * 179.97438 * 9 8 6 12 12 C 1.39785 * 120.06381 * 180.02562 * 11 9 8 13 13 C 1.37634 * 119.92582 * 179.70489 * 12 11 9 14 14 C 1.50693 * 119.96398 * 180.29901 * 13 12 11 15 15 O 1.42901 * 109.47558 * 105.25445 * 14 13 12 16 16 Si 1.86297 * 109.47385 * 345.25215 * 14 13 12 17 17 C 1.39206 * 120.06756 * 0.54888 * 13 12 11 18 18 N 1.39043 * 119.92937 * 179.72322 * 17 13 12 19 19 C 1.46901 * 110.99815 * 239.73104 * 18 17 13 20 20 C 1.46898 * 110.99710 * 115.77485 * 18 17 13 21 21 C 1.39242 * 120.13623 * 359.45391 * 17 13 12 22 22 C 1.37582 * 120.06922 * 0.27059 * 21 17 13 23 23 C 1.52994 * 109.46952 * 60.00084 * 6 5 4 24 24 C 1.52996 * 109.47346 * 239.99761 * 2 1 3 25 25 H 1.09006 * 109.46531 * 180.02562 * 1 2 3 26 26 H 1.08997 * 109.47325 * 299.99687 * 1 2 3 27 27 H 1.08998 * 109.47632 * 60.00589 * 1 2 3 28 28 H 1.09002 * 109.47177 * 299.99960 * 4 2 1 29 29 H 1.09000 * 109.46866 * 60.00370 * 4 2 1 30 30 H 1.09003 * 109.47084 * 180.02562 * 5 4 2 31 31 H 1.09000 * 109.47424 * 60.00238 * 5 4 2 32 32 H 0.97001 * 119.99723 * 264.99050 * 8 6 5 33 33 H 1.08000 * 120.03725 * 359.97438 * 12 11 9 34 34 H 1.09003 * 109.46911 * 225.25412 * 14 13 12 35 35 H 0.96700 * 113.99890 * 299.99951 * 15 14 13 36 36 H 1.48499 * 110.00333 * 180.02562 * 16 14 13 37 37 H 1.48506 * 110.00033 * 301.32129 * 16 14 13 38 38 H 1.09002 * 109.47401 * 59.99935 * 19 18 17 39 39 H 1.09001 * 109.46874 * 299.99948 * 19 18 17 40 40 H 1.09004 * 109.46970 * 180.02562 * 19 18 17 41 41 H 1.09007 * 109.46909 * 183.95356 * 20 18 17 42 42 H 1.08998 * 109.47110 * 303.94963 * 20 18 17 43 43 H 1.09002 * 109.47061 * 63.95545 * 20 18 17 44 44 H 1.08002 * 119.96171 * 180.25224 * 21 17 13 45 45 H 1.08006 * 120.03404 * 180.02562 * 22 21 17 46 46 H 1.09000 * 109.47280 * 60.00573 * 23 6 5 47 47 H 1.09002 * 109.46898 * 180.02562 * 23 6 5 48 48 H 1.09009 * 109.47039 * 60.00012 * 24 2 1 49 49 H 1.09000 * 109.47311 * 299.99995 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0400 -0.7212 1.2493 5 6 3.5700 -0.7206 1.2496 6 6 4.0805 -1.4415 0.0003 7 1 3.7176 -2.4694 0.0002 8 7 5.5455 -1.4415 0.0009 9 6 6.2192 -2.3977 0.6704 10 8 5.6110 -3.2602 1.2743 11 6 7.6944 -2.3979 0.6705 12 6 8.3945 -3.3893 1.3639 13 6 9.7708 -3.3903 1.3571 14 6 10.5264 -4.4626 2.0988 15 8 11.0661 -5.3987 1.1637 16 14 9.3702 -5.3446 3.2633 17 6 10.4656 -2.3988 0.6700 18 7 11.8560 -2.3992 0.6698 19 6 12.3829 -1.1567 1.2498 20 6 12.3821 -2.6124 -0.6851 21 6 9.7709 -1.4099 -0.0216 22 6 8.3951 -1.4067 -0.0232 23 6 3.5705 -0.7204 -1.2489 24 6 2.0400 -0.7213 -1.2492 25 1 -0.3632 -1.0278 0.0005 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5137 -0.8900 28 1 1.6767 -0.2073 2.1393 29 1 1.6767 -1.7488 1.2493 30 1 3.9334 -1.2347 2.1393 31 1 3.9330 0.3072 1.2497 32 1 6.0307 -0.7533 -0.4807 33 1 7.8560 -4.1562 1.9009 34 1 11.3378 -4.0081 2.6674 35 1 10.3992 -5.8424 0.6219 36 1 10.1035 -6.4042 4.0013 37 1 8.7778 -4.3765 4.2209 38 1 12.0336 -1.0587 2.2776 39 1 12.0335 -0.3059 0.6647 40 1 13.4725 -1.1832 1.2369 41 1 13.4694 -2.6784 -0.6464 42 1 11.9761 -3.5390 -1.0909 43 1 12.0911 -1.7780 -1.3233 44 1 10.3128 -0.6443 -0.5571 45 1 7.8569 -0.6396 -0.5602 46 1 3.9335 0.3074 -1.2488 47 1 3.9338 -1.2343 -2.1389 48 1 1.6767 -0.2074 -2.1392 49 1 1.6767 -1.7489 -1.2492 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_4279154_13422196.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:34:43 Heat of formation + Delta-G solvation = -42.463549 kcal Electronic energy + Delta-G solvation = -27487.016589 eV Core-core repulsion = 23800.944032 eV Total energy + Delta-G solvation = -3686.072556 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.193 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.72939 -40.73761 -39.29954 -37.78401 -37.16548 -35.72827 -33.09125 -32.13046 -31.81962 -31.03275 -28.63340 -27.28239 -26.87644 -25.71749 -23.83292 -23.31689 -22.85520 -22.12003 -21.24018 -20.69999 -19.08917 -17.83340 -17.66072 -17.47557 -16.57892 -16.32647 -16.13520 -16.05507 -15.68472 -15.50673 -15.29691 -15.25146 -15.13390 -14.83593 -14.78428 -14.27982 -14.14292 -13.91653 -13.68855 -13.56369 -13.26614 -13.22596 -13.15240 -13.00920 -12.73204 -12.59759 -12.54443 -12.15612 -12.06008 -11.96849 -11.88541 -11.72145 -11.36369 -11.16253 -10.84931 -10.30357 -10.13058 -10.09806 -9.77308 -9.57343 -4.90339 -0.35906 0.13203 1.38651 1.71474 1.77920 2.06728 2.07483 2.67097 2.74110 3.46739 3.55962 3.63774 3.65145 3.67169 3.77695 3.87740 3.96842 4.03088 4.09265 4.14442 4.20356 4.25761 4.34849 4.39440 4.42221 4.46248 4.48928 4.50872 4.51790 4.63220 4.69329 4.73655 4.77537 4.83175 4.87081 4.92486 4.93910 4.99120 5.01630 5.09110 5.11112 5.14325 5.20615 5.24054 5.26881 5.34906 5.45147 5.50058 5.55646 5.76582 6.24699 6.45160 6.70862 7.19349 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.095 4.095 3 H 0.070 0.930 4 C -0.112 4.112 5 C -0.130 4.130 6 C 0.145 3.855 7 H 0.091 0.909 8 N -0.724 5.724 9 C 0.560 3.440 10 O -0.531 6.531 11 C -0.136 4.136 12 C -0.048 4.048 13 C -0.108 4.108 14 C -0.044 4.044 15 O -0.529 6.529 16 Si 0.666 3.334 17 C 0.143 3.857 18 N -0.509 5.509 19 C 0.024 3.976 20 C 0.033 3.967 21 C -0.158 4.158 22 C -0.069 4.069 23 C -0.127 4.127 24 C -0.111 4.111 25 H 0.055 0.945 26 H 0.055 0.945 27 H 0.055 0.945 28 H 0.066 0.934 29 H 0.066 0.934 30 H 0.069 0.931 31 H 0.063 0.937 32 H 0.398 0.602 33 H 0.145 0.855 34 H 0.119 0.881 35 H 0.373 0.627 36 H -0.251 1.251 37 H -0.257 1.257 38 H 0.070 0.930 39 H 0.033 0.967 40 H 0.077 0.923 41 H 0.076 0.924 42 H 0.075 0.925 43 H 0.029 0.971 44 H 0.129 0.871 45 H 0.128 0.872 46 H 0.068 0.932 47 H 0.070 0.930 48 H 0.068 0.932 49 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.836 3.652 -4.221 5.644 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.113 4.113 3 H 0.088 0.912 4 C -0.150 4.150 5 C -0.168 4.168 6 C 0.041 3.959 7 H 0.109 0.891 8 N -0.375 5.375 9 C 0.348 3.652 10 O -0.408 6.408 11 C -0.139 4.139 12 C -0.067 4.067 13 C -0.109 4.109 14 C -0.155 4.155 15 O -0.333 6.333 16 Si 0.568 3.432 17 C 0.048 3.952 18 N -0.229 5.229 19 C -0.122 4.122 20 C -0.113 4.113 21 C -0.178 4.178 22 C -0.089 4.089 23 C -0.165 4.165 24 C -0.149 4.149 25 H 0.075 0.925 26 H 0.074 0.926 27 H 0.074 0.926 28 H 0.084 0.916 29 H 0.085 0.915 30 H 0.087 0.913 31 H 0.082 0.918 32 H 0.234 0.766 33 H 0.162 0.838 34 H 0.137 0.863 35 H 0.219 0.781 36 H -0.175 1.175 37 H -0.181 1.181 38 H 0.089 0.911 39 H 0.051 0.949 40 H 0.096 0.904 41 H 0.094 0.906 42 H 0.094 0.906 43 H 0.048 0.952 44 H 0.147 0.853 45 H 0.146 0.854 46 H 0.086 0.914 47 H 0.089 0.911 48 H 0.087 0.913 49 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -0.709 2.626 -2.384 3.617 hybrid contribution 0.421 1.736 -0.874 1.988 sum -0.288 4.362 -3.257 5.451 Atomic orbital electron populations 1.21835 0.94971 1.02031 1.01829 1.21186 0.95745 0.99634 0.94755 0.91156 1.21565 0.94520 1.01170 0.97777 1.21928 0.96046 1.00696 0.98157 1.21053 0.78424 1.01231 0.95147 0.89064 1.46012 1.07488 1.30464 1.53538 1.18151 0.86962 0.81325 0.78786 1.90810 1.69736 1.37206 1.43038 1.19880 0.92914 0.98367 1.02777 1.21052 0.92642 0.96999 0.95995 1.20307 0.92743 0.97848 1.00003 1.24824 1.03329 0.90459 0.96914 1.86563 1.36609 1.56369 1.53798 0.95051 0.83291 0.82975 0.81901 1.18825 0.89231 0.92900 0.94241 1.59390 1.04032 1.36545 1.22948 1.22516 1.01078 0.88679 0.99968 1.22429 1.01025 1.01268 0.86606 1.21650 0.94720 1.00157 1.01321 1.21153 0.94115 0.96842 0.96774 1.21823 0.96779 1.00846 0.97038 1.21556 0.93950 1.01357 0.98042 0.92539 0.92587 0.92608 0.91558 0.91535 0.91276 0.91817 0.76635 0.83797 0.86345 0.78063 1.17540 1.18105 0.91106 0.94880 0.90383 0.90552 0.90603 0.95208 0.85318 0.85440 0.91358 0.91146 0.91304 0.91449 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.18 9.19 37.16 0.34 0.53 16 2 C -0.09 0.12 2.72 -90.62 -0.25 -0.12 16 3 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 4 C -0.11 0.06 5.20 -26.73 -0.14 -0.08 16 5 C -0.13 0.00 5.49 -26.73 -0.15 -0.14 16 6 C 0.15 -0.05 2.45 -67.93 -0.17 -0.22 16 7 H 0.09 0.14 7.58 -51.93 -0.39 -0.25 16 8 N -0.72 0.44 5.03 -54.85 -0.28 0.16 16 9 C 0.56 1.15 7.73 -12.48 -0.10 1.05 16 10 O -0.53 -2.88 16.00 5.28 0.08 -2.80 16 11 C -0.14 -0.12 5.88 -104.95 -0.62 -0.73 16 12 C -0.05 -0.06 8.20 -39.22 -0.32 -0.38 16 13 C -0.11 -0.11 5.28 -104.49 -0.55 -0.66 16 14 C -0.04 -0.05 2.33 36.00 0.08 0.04 16 15 O -0.53 -0.58 12.88 -35.23 -0.45 -1.04 16 16 Si 0.67 0.58 29.91 -169.99 -5.08 -4.50 16 17 C 0.14 0.11 4.69 -83.86 -0.39 -0.28 16 18 N -0.51 -0.33 4.20 -186.85 -0.78 -1.11 16 19 C 0.02 -0.02 9.34 60.07 0.56 0.54 16 20 C 0.03 -0.02 9.32 60.06 0.56 0.54 16 21 C -0.16 0.10 8.57 -39.45 -0.34 -0.24 16 22 C -0.07 0.08 9.53 -39.23 -0.37 -0.30 16 23 C -0.13 0.26 5.39 -26.71 -0.14 0.12 16 24 C -0.11 0.19 5.21 -26.71 -0.14 0.05 16 25 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 26 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 27 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 28 H 0.07 -0.03 8.14 -51.93 -0.42 -0.46 16 29 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 30 H 0.07 0.14 8.14 -51.93 -0.42 -0.29 16 31 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.40 -1.25 6.62 -40.82 -0.27 -1.52 16 33 H 0.14 0.12 4.69 -52.49 -0.25 -0.12 16 34 H 0.12 0.25 7.77 -51.93 -0.40 -0.15 16 35 H 0.37 -0.96 8.70 45.56 0.40 -0.57 16 36 H -0.25 -0.92 7.11 56.52 0.40 -0.52 16 37 H -0.26 -0.93 7.11 56.52 0.40 -0.53 16 38 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 39 H 0.03 -0.05 7.10 -51.93 -0.37 -0.42 16 40 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 41 H 0.08 -0.07 8.14 -51.92 -0.42 -0.49 16 42 H 0.08 0.01 8.12 -51.93 -0.42 -0.42 16 43 H 0.03 -0.04 7.45 -51.93 -0.39 -0.43 16 44 H 0.13 -0.25 7.01 -52.49 -0.37 -0.62 16 45 H 0.13 -0.49 6.39 -52.48 -0.34 -0.82 16 46 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 47 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 48 H 0.07 -0.14 8.14 -51.92 -0.42 -0.57 16 49 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 LS Contribution 382.30 15.07 5.76 5.76 Total: 0.00 -6.29 382.30 -11.22 -17.51 By element: Atomic # 1 Polarization: -5.37 SS G_CDS: -8.34 Total: -13.70 kcal Atomic # 6 Polarization: 1.84 SS G_CDS: -2.13 Total: -0.28 kcal Atomic # 7 Polarization: 0.11 SS G_CDS: -1.06 Total: -0.95 kcal Atomic # 8 Polarization: -3.47 SS G_CDS: -0.37 Total: -3.84 kcal Atomic # 14 Polarization: 0.58 SS G_CDS: -5.08 Total: -4.50 kcal Total LS contribution 5.76 Total: 5.76 kcal Total: -6.29 -11.22 -17.51 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_13422196.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.954 kcal (2) G-P(sol) polarization free energy of solvation -6.293 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.247 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.216 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.509 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.464 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds