Wall clock time and date at job start Tue Mar 9 2021 14:34:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 H 1.09000 * 109.46911 * 2 1 4 4 C 1.53000 * 109.47195 * 119.99602 * 2 1 3 5 5 C 1.53002 * 109.46943 * 180.02562 * 4 2 1 6 6 C 1.53005 * 109.47092 * 300.00006 * 5 4 2 7 7 H 1.09006 * 109.46748 * 299.99865 * 6 5 4 8 8 N 1.46499 * 109.46903 * 180.02562 * 6 5 4 9 9 C 1.34774 * 120.00180 * 85.00137 * 8 6 5 10 10 O 1.21594 * 119.99828 * 359.97438 * 9 8 6 11 11 C 1.47520 * 119.99765 * 179.97438 * 9 8 6 12 12 C 1.39785 * 120.06381 * 180.02562 * 11 9 8 13 13 C 1.37634 * 119.92582 * 179.70489 * 12 11 9 14 14 C 1.50693 * 119.96398 * 180.29901 * 13 12 11 15 15 O 1.42901 * 109.47558 * 105.25445 * 14 13 12 16 16 Si 1.86297 * 109.47385 * 345.25215 * 14 13 12 17 17 C 1.39206 * 120.06756 * 0.54888 * 13 12 11 18 18 N 1.39043 * 119.92937 * 179.72322 * 17 13 12 19 19 C 1.46901 * 110.99815 * 239.73104 * 18 17 13 20 20 C 1.46898 * 110.99710 * 115.77485 * 18 17 13 21 21 C 1.39242 * 120.13623 * 359.45391 * 17 13 12 22 22 C 1.37582 * 120.06922 * 0.27059 * 21 17 13 23 23 C 1.52994 * 109.46952 * 60.00084 * 6 5 4 24 24 C 1.52996 * 109.47346 * 239.99761 * 2 1 3 25 25 H 1.09006 * 109.46531 * 180.02562 * 1 2 3 26 26 H 1.08997 * 109.47325 * 299.99687 * 1 2 3 27 27 H 1.08998 * 109.47632 * 60.00589 * 1 2 3 28 28 H 1.09002 * 109.47177 * 299.99960 * 4 2 1 29 29 H 1.09000 * 109.46866 * 60.00370 * 4 2 1 30 30 H 1.09003 * 109.47084 * 180.02562 * 5 4 2 31 31 H 1.09000 * 109.47424 * 60.00238 * 5 4 2 32 32 H 0.97001 * 119.99723 * 264.99050 * 8 6 5 33 33 H 1.08000 * 120.03725 * 359.97438 * 12 11 9 34 34 H 1.09003 * 109.46911 * 225.25412 * 14 13 12 35 35 H 0.96700 * 113.99890 * 299.99951 * 15 14 13 36 36 H 1.48499 * 110.00333 * 180.02562 * 16 14 13 37 37 H 1.48506 * 110.00033 * 301.32129 * 16 14 13 38 38 H 1.09002 * 109.47401 * 59.99935 * 19 18 17 39 39 H 1.09001 * 109.46874 * 299.99948 * 19 18 17 40 40 H 1.09004 * 109.46970 * 180.02562 * 19 18 17 41 41 H 1.09007 * 109.46909 * 183.95356 * 20 18 17 42 42 H 1.08998 * 109.47110 * 303.94963 * 20 18 17 43 43 H 1.09002 * 109.47061 * 63.95545 * 20 18 17 44 44 H 1.08002 * 119.96171 * 180.25224 * 21 17 13 45 45 H 1.08006 * 120.03404 * 180.02562 * 22 21 17 46 46 H 1.09000 * 109.47280 * 60.00573 * 23 6 5 47 47 H 1.09002 * 109.46898 * 180.02562 * 23 6 5 48 48 H 1.09009 * 109.47039 * 60.00012 * 24 2 1 49 49 H 1.09000 * 109.47311 * 299.99995 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0400 -0.7212 1.2493 5 6 3.5700 -0.7206 1.2496 6 6 4.0805 -1.4415 0.0003 7 1 3.7176 -2.4694 0.0002 8 7 5.5455 -1.4415 0.0009 9 6 6.2192 -2.3977 0.6704 10 8 5.6110 -3.2602 1.2743 11 6 7.6944 -2.3979 0.6705 12 6 8.3945 -3.3893 1.3639 13 6 9.7708 -3.3903 1.3571 14 6 10.5264 -4.4626 2.0988 15 8 11.0661 -5.3987 1.1637 16 14 9.3702 -5.3446 3.2633 17 6 10.4656 -2.3988 0.6700 18 7 11.8560 -2.3992 0.6698 19 6 12.3829 -1.1567 1.2498 20 6 12.3821 -2.6124 -0.6851 21 6 9.7709 -1.4099 -0.0216 22 6 8.3951 -1.4067 -0.0232 23 6 3.5705 -0.7204 -1.2489 24 6 2.0400 -0.7213 -1.2492 25 1 -0.3632 -1.0278 0.0005 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5137 -0.8900 28 1 1.6767 -0.2073 2.1393 29 1 1.6767 -1.7488 1.2493 30 1 3.9334 -1.2347 2.1393 31 1 3.9330 0.3072 1.2497 32 1 6.0307 -0.7533 -0.4807 33 1 7.8560 -4.1562 1.9009 34 1 11.3378 -4.0081 2.6674 35 1 10.3992 -5.8424 0.6219 36 1 10.1035 -6.4042 4.0013 37 1 8.7778 -4.3765 4.2209 38 1 12.0336 -1.0587 2.2776 39 1 12.0335 -0.3059 0.6647 40 1 13.4725 -1.1832 1.2369 41 1 13.4694 -2.6784 -0.6464 42 1 11.9761 -3.5390 -1.0909 43 1 12.0911 -1.7780 -1.3233 44 1 10.3128 -0.6443 -0.5571 45 1 7.8569 -0.6396 -0.5602 46 1 3.9335 0.3074 -1.2488 47 1 3.9338 -1.2343 -2.1389 48 1 1.6767 -0.2074 -2.1392 49 1 1.6767 -1.7489 -1.2492 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_4279154_13422196.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:34:42 Heat of formation + Delta-G solvation = -38.541336 kcal Electronic energy + Delta-G solvation = -27486.846509 eV Core-core repulsion = 23800.944032 eV Total energy + Delta-G solvation = -3685.902476 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.193 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -41.76431 -40.75920 -39.31259 -37.82292 -37.20079 -35.78696 -33.09841 -32.12530 -31.74998 -31.01582 -28.55181 -27.26055 -26.90683 -25.69774 -23.79156 -23.29672 -22.85428 -22.09078 -21.28047 -20.66465 -19.10708 -17.89364 -17.64192 -17.50488 -16.60815 -16.37742 -16.13515 -16.10363 -15.71850 -15.53684 -15.23041 -15.20038 -15.14855 -14.89856 -14.74116 -14.25947 -14.21376 -14.00550 -13.65459 -13.50500 -13.21462 -13.15492 -13.09975 -12.97764 -12.67374 -12.55529 -12.51783 -12.25693 -12.09141 -12.07093 -11.90251 -11.67494 -11.30078 -11.13676 -10.95824 -10.40802 -10.18362 -10.11114 -9.77296 -9.51644 -5.04377 -0.38533 0.14878 1.26079 1.54895 1.67759 1.88001 2.04552 2.63788 2.78807 3.48795 3.57149 3.67257 3.68893 3.74426 3.80854 3.93461 4.02520 4.11106 4.15124 4.19690 4.23786 4.35245 4.41186 4.43905 4.45466 4.49794 4.54349 4.58005 4.58639 4.65077 4.75505 4.79948 4.81073 4.92064 4.96323 4.99223 5.00654 5.03414 5.09551 5.12460 5.15773 5.19758 5.24563 5.25298 5.35099 5.41814 5.46790 5.55229 5.58037 5.84428 6.28115 6.46624 6.80816 7.13700 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.091 4.091 3 H 0.076 0.924 4 C -0.111 4.111 5 C -0.125 4.125 6 C 0.146 3.854 7 H 0.068 0.932 8 N -0.709 5.709 9 C 0.557 3.443 10 O -0.574 6.574 11 C -0.148 4.148 12 C -0.058 4.058 13 C -0.117 4.117 14 C -0.036 4.036 15 O -0.541 6.541 16 Si 0.734 3.266 17 C 0.137 3.863 18 N -0.525 5.525 19 C 0.024 3.976 20 C 0.035 3.965 21 C -0.157 4.157 22 C -0.056 4.056 23 C -0.119 4.119 24 C -0.111 4.111 25 H 0.051 0.949 26 H 0.053 0.947 27 H 0.060 0.940 28 H 0.065 0.935 29 H 0.055 0.945 30 H 0.043 0.957 31 H 0.074 0.926 32 H 0.414 0.586 33 H 0.139 0.861 34 H 0.107 0.893 35 H 0.389 0.611 36 H -0.288 1.288 37 H -0.296 1.296 38 H 0.063 0.937 39 H 0.044 0.956 40 H 0.083 0.917 41 H 0.079 0.921 42 H 0.067 0.933 43 H 0.042 0.958 44 H 0.149 0.851 45 H 0.160 0.840 46 H 0.084 0.916 47 H 0.077 0.923 48 H 0.078 0.922 49 H 0.059 0.941 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.560 5.473 -6.105 8.218 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.109 4.109 3 H 0.095 0.905 4 C -0.149 4.149 5 C -0.164 4.164 6 C 0.042 3.958 7 H 0.086 0.914 8 N -0.360 5.360 9 C 0.346 3.654 10 O -0.455 6.455 11 C -0.151 4.151 12 C -0.077 4.077 13 C -0.118 4.118 14 C -0.148 4.148 15 O -0.348 6.348 16 Si 0.642 3.358 17 C 0.042 3.958 18 N -0.246 5.246 19 C -0.122 4.122 20 C -0.111 4.111 21 C -0.177 4.177 22 C -0.076 4.076 23 C -0.157 4.157 24 C -0.149 4.149 25 H 0.070 0.930 26 H 0.072 0.928 27 H 0.079 0.921 28 H 0.083 0.917 29 H 0.074 0.926 30 H 0.062 0.938 31 H 0.093 0.907 32 H 0.252 0.748 33 H 0.157 0.843 34 H 0.125 0.875 35 H 0.238 0.762 36 H -0.215 1.215 37 H -0.224 1.224 38 H 0.082 0.918 39 H 0.063 0.937 40 H 0.102 0.898 41 H 0.097 0.903 42 H 0.086 0.914 43 H 0.060 0.940 44 H 0.166 0.834 45 H 0.177 0.823 46 H 0.103 0.897 47 H 0.095 0.905 48 H 0.097 0.903 49 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -0.434 4.473 -4.317 6.232 hybrid contribution 0.333 1.173 -0.251 1.245 sum -0.101 5.646 -4.568 7.263 Atomic orbital electron populations 1.21837 0.95060 1.01805 1.02002 1.21157 0.95649 0.99777 0.94345 0.90528 1.21546 0.94177 1.00738 0.98453 1.21866 0.96365 1.00877 0.97249 1.21020 0.78479 1.00215 0.96066 0.91415 1.45903 1.07469 1.30045 1.52626 1.18396 0.87505 0.81143 0.78366 1.90789 1.70603 1.39035 1.45056 1.19875 0.92245 0.99230 1.03766 1.21073 0.92797 0.97382 0.96423 1.20249 0.92608 0.98284 1.00699 1.24675 1.02586 0.90594 0.96957 1.86516 1.37753 1.56510 1.54000 0.94238 0.81467 0.79905 0.80230 1.18981 0.89518 0.93082 0.94226 1.59363 1.04086 1.37431 1.23696 1.22532 1.01405 0.88592 0.99676 1.22419 1.01110 1.01347 0.86242 1.21844 0.94907 1.00023 1.00890 1.21433 0.94081 0.96439 0.95602 1.21777 0.96410 1.01480 0.95988 1.21560 0.94219 1.00982 0.98137 0.92994 0.92764 0.92071 0.91666 0.92592 0.93823 0.90724 0.74837 0.84337 0.87526 0.76221 1.21523 1.22357 0.91841 0.93703 0.89838 0.90276 0.91403 0.93996 0.83382 0.82290 0.89739 0.90456 0.90304 0.92235 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.40 9.19 71.98 0.66 1.06 16 2 C -0.09 0.28 2.72 -10.80 -0.03 0.25 16 3 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 4 C -0.11 0.05 5.20 30.59 0.16 0.20 16 5 C -0.12 -0.07 5.49 30.60 0.17 0.10 16 6 C 0.15 -0.08 2.45 44.99 0.11 0.03 16 7 H 0.07 0.32 7.58 -2.38 -0.02 0.30 16 8 N -0.71 1.19 5.03 -445.71 -2.24 -1.05 16 9 C 0.56 2.65 7.73 86.69 0.67 3.32 16 10 O -0.57 -7.45 16.00 -4.01 -0.06 -7.51 16 11 C -0.15 -0.25 5.88 -20.08 -0.12 -0.37 16 12 C -0.06 -0.19 8.20 22.50 0.18 -0.01 16 13 C -0.12 -0.31 5.28 -19.78 -0.10 -0.42 16 14 C -0.04 -0.12 2.33 71.23 0.17 0.05 16 15 O -0.54 -1.50 12.88 -148.98 -1.92 -3.42 16 16 Si 0.73 2.79 29.91 68.60 2.05 4.84 16 17 C 0.14 0.15 4.69 38.47 0.18 0.33 16 18 N -0.52 -0.45 4.20 -745.08 -3.13 -3.58 16 19 C 0.02 -0.05 9.34 127.69 1.19 1.14 16 20 C 0.03 -0.06 9.32 127.69 1.19 1.13 16 21 C -0.16 0.46 8.57 22.36 0.19 0.65 16 22 C -0.06 0.22 9.53 22.49 0.21 0.43 16 23 C -0.12 0.65 5.39 30.61 0.17 0.82 16 24 C -0.11 0.47 5.21 30.61 0.16 0.63 16 25 H 0.05 -0.09 8.14 -2.38 -0.02 -0.11 16 26 H 0.05 -0.12 8.14 -2.39 -0.02 -0.14 16 27 H 0.06 -0.21 8.14 -2.39 -0.02 -0.23 16 28 H 0.06 -0.02 8.14 -2.39 -0.02 -0.04 16 29 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 30 H 0.04 0.26 8.14 -2.39 -0.02 0.24 16 31 H 0.07 -0.12 8.14 -2.39 -0.02 -0.14 16 32 H 0.41 -3.41 6.62 -92.71 -0.61 -4.02 16 33 H 0.14 0.51 4.69 -2.91 -0.01 0.50 16 34 H 0.11 0.61 7.77 -2.39 -0.02 0.59 16 35 H 0.39 -1.87 8.70 -74.06 -0.64 -2.52 16 36 H -0.29 -2.82 7.11 99.48 0.71 -2.11 16 37 H -0.30 -3.04 7.11 99.48 0.71 -2.33 16 38 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 39 H 0.04 -0.20 7.10 -2.39 -0.02 -0.22 16 40 H 0.08 -0.28 8.14 -2.38 -0.02 -0.30 16 41 H 0.08 -0.20 8.14 -2.38 -0.02 -0.22 16 42 H 0.07 -0.01 8.12 -2.39 -0.02 -0.03 16 43 H 0.04 -0.18 7.45 -2.39 -0.02 -0.20 16 44 H 0.15 -1.00 7.01 -2.91 -0.02 -1.02 16 45 H 0.16 -1.73 6.39 -2.91 -0.02 -1.75 16 46 H 0.08 -0.69 8.14 -2.39 -0.02 -0.71 16 47 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 48 H 0.08 -0.45 8.14 -2.38 -0.02 -0.47 16 49 H 0.06 -0.15 8.14 -2.39 -0.02 -0.16 16 Total: 0.00 -16.88 382.30 -0.42 -17.30 By element: Atomic # 1 Polarization: -15.63 SS G_CDS: -0.28 Total: -15.91 kcal Atomic # 6 Polarization: 4.19 SS G_CDS: 5.16 Total: 9.35 kcal Atomic # 7 Polarization: 0.74 SS G_CDS: -5.37 Total: -4.63 kcal Atomic # 8 Polarization: -8.95 SS G_CDS: -1.98 Total: -10.94 kcal Atomic # 14 Polarization: 2.79 SS G_CDS: 2.05 Total: 4.84 kcal Total: -16.88 -0.42 -17.30 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_4279154_13422196.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.246 kcal (2) G-P(sol) polarization free energy of solvation -16.876 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.122 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.419 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.295 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.541 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds